RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 FOXI1Q12951 378 aa11.43□□□□□ -0.58
CTSD-201ENST00000236671 LEPROTO15243 131 aa11.42□□□□□ -0.58
CTSD-201ENST00000236671 LYRM7Q5U5X0 104 aa11.42□□□□□ -0.58
CTSD-201ENST00000236671 C10orf126Q8N4M7 172 aa11.42□□□□□ -0.58
CTSD-201ENST00000236671 RNF152Q8N8N0 203 aa11.42□□□□□ -0.58
CTSD-201ENST00000236671 I3L3M4 83 aa11.42□□□□□ -0.58
CTSD-201ENST00000236671 LINC01356Q8N9X3 169 aa11.42□□□□□ -0.58
CTSD-201ENST00000236671 TCL1BO95988 128 aa11.41□□□□□ -0.58
CTSD-201ENST00000236671 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
CTSD-201ENST00000236671 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
CTSD-201ENST00000236671 TRGV11A0A075B6L2 103 aa11.41□□□□□ -0.58
CTSD-201ENST00000236671 RBMY1A1P0DJD3 496 aaKnown RBP11.41□□□□□ -0.58
CTSD-201ENST00000236671 RBMY1CP0DJD4 496 aa11.41□□□□□ -0.58
CTSD-201ENST00000236671 RBMY1FQ15415 496 aaKnown RBP11.41□□□□□ -0.58
CTSD-201ENST00000236671 DUX5Q96PT3 197 aa11.41□□□□□ -0.58
CTSD-201ENST00000236671 RHODO00212 210 aa11.4□□□□□ -0.58
CTSD-201ENST00000236671 ZNF418Q8TF45 676 aaPredicted RBP11.4□□□□□ -0.58
CTSD-201ENST00000236671 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.58
CTSD-201ENST00000236671 YAE1D1Q9NRH1 226 aa11.39□□□□□ -0.59
CTSD-201ENST00000236671 TRBV20-1A0A075B6N2 111 aa11.39□□□□□ -0.59
CTSD-201ENST00000236671 A0A0J9YXV3 536 aa11.39□□□□□ -0.59
CTSD-201ENST00000236671 EIF4EBP3O60516 100 aaPredicted RBP11.39□□□□□ -0.59
CTSD-201ENST00000236671 HOXD3P31249 432 aaPredicted RBP11.39□□□□□ -0.59
CTSD-201ENST00000236671 EDA2RQ9HAV5 297 aa11.39□□□□□ -0.59
CTSD-201ENST00000236671 IGHV3-64A0A075B6Q5 118 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 INAFM1C9JVW0 142 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 PTH2Q96A98 100 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 A4D1N5 150 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 SBSPONQ8IVN8 264 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 FAM104AQ969W3 186 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 VCX2Q9H322 139 aa11.38□□□□□ -0.59
CTSD-201ENST00000236671 FBN1P35555 2871 aaKnown RBP11.36□□□□□ -0.59
CTSD-201ENST00000236671 ELANEP08246 267 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 TEN1Q86WV5 123 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 CDIP1Q9H305 208 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 ATRQ13535 2644 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 FHL3Q13643 280 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 TMEM263Q8WUH6 116 aaKnown RBP11.36□□□□□ -0.59
CTSD-201ENST00000236671 UBE2E2Q96LR5 201 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 CARD19Q96LW7 228 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 VPREB3Q9UKI3 123 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 PYGO1Q9Y3Y4 419 aa11.36□□□□□ -0.59
CTSD-201ENST00000236671 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 KNCNA6PVL3 124 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 ZNF702PQ9H963 129 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 IGHV3-73A0A0B4J1V6 119 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 A0A0B4J2C4 111 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 IGHV3-33P01772 117 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 PROK1P58294 105 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 TCTEX1D4Q5JR98 221 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 PPDPFLQ8WWR9 84 aa11.35□□□□□ -0.59
CTSD-201ENST00000236671 J3QLI3 93 aa11.34□□□□□ -0.59
CTSD-201ENST00000236671 M0R2P5 195 aa11.34□□□□□ -0.59
CTSD-201ENST00000236671 MUSTN1Q8IVN3 82 aa11.34□□□□□ -0.59
CTSD-201ENST00000236671 SORL1Q92673 2214 aa11.34□□□□□ -0.59
CTSD-201ENST00000236671 A0A0J9YXY3 114 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 A8MTW9 85 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 SCGB1C2P0DMR2 95 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 CD28P10747 220 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 HTN1P15515 57 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 RBMY1BA6NDE4 496 aaKnown RBP11.33□□□□□ -0.6
CTSD-201ENST00000236671 RBMY1EA6NEQ0 496 aaKnown RBP11.33□□□□□ -0.6
CTSD-201ENST00000236671 A8MWV9 139 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 RBMY1DP0C7P1 496 aaKnown RBP11.33□□□□□ -0.6
CTSD-201ENST00000236671 IGHV3-30-3P0DP02 117 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 MRPS36P82909 103 aaKnown RBP11.33□□□□□ -0.6
CTSD-201ENST00000236671 RAX2Q96IS3 184 aa11.33□□□□□ -0.6
CTSD-201ENST00000236671 DEFB131AP59861 70 aa11.32□□□□□ -0.6
CTSD-201ENST00000236671 CEMP1Q6PRD7 247 aaPredicted RBP11.32□□□□□ -0.6
CTSD-201ENST00000236671 PRM2P04554 102 aa11.32□□□□□ -0.6
CTSD-201ENST00000236671 CRYBA4P53673 196 aa11.32□□□□□ -0.6
CTSD-201ENST00000236671 SPXQ9BT56 116 aa11.32□□□□□ -0.6
CTSD-201ENST00000236671 H3BMM0 161 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 SLURP1P55000 103 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 DEFB136Q30KP8 78 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 C18orf65Q6ZTR6 163 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 ANKRD29Q8N6D5 301 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 LITAFQ99732 161 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 TIMM21Q9BVV7 248 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 Q9UF83 564 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 ERG28Q9UKR5 140 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 TENM1Q9UKZ4 2725 aa11.31□□□□□ -0.6
CTSD-201ENST00000236671 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 FSHBP01225 129 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 Q6YL49 198 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 Q6ZSN1 163 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 TNFRSF18Q9Y5U5 241 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 C2CD3Q4AC94 2353 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 TRAV8-3A0A0A6YYJ7 113 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.3□□□□□ -0.6
CTSD-201ENST00000236671 DUX3Q96PT4 197 aa11.3□□□□□ -0.6
CTSD-201ENST00000236671 H7C2G1 150 aa11.29□□□□□ -0.6
CTSD-201ENST00000236671 RNASE13Q5GAN3 156 aaKnown RBP11.29□□□□□ -0.6
CTSD-201ENST00000236671 CHCHD7Q9BUK0 85 aa11.29□□□□□ -0.6
CTSD-201ENST00000236671 PIK3CD-AS1Q5SR53 167 aa11.29□□□□□ -0.6
CTSD-201ENST00000236671 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
CTSD-201ENST00000236671 IGHV1-58A0A0C4DH39 117 aa11.28□□□□□ -0.6
CTSD-201ENST00000236671 M0QXV9 152 aa11.28□□□□□ -0.6
CTSD-201ENST00000236671 SLC25A20O43772 301 aa11.28□□□□□ -0.6
CTSD-201ENST00000236671 CIDEAO60543 219 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms