RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 PTPRQQ9UMZ3 2332 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 WT1-ASQ06250 92 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 FAM19A1Q7Z5A9 133 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 SMIM26A0A096LP01 95 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 Q6ZR03 302 aa8.58□□□□□ -1.04
MSH6-201ENST00000234420 ODF1Q14990 250 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 LTBP1Q14766 1721 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 LYRM9A8MSI8 78 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 LOXP28300 417 aaPredicted RBP8.57□□□□□ -1.04
MSH6-201ENST00000234420 COX7CP15954 63 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 TP73-AS1Q9UF72 201 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 SERP1Q9Y6X1 66 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 AGPAT4-IT1Q9H0P7 198 aa8.57□□□□□ -1.04
MSH6-201ENST00000234420 DEFB1P60022 68 aa8.56□□□□□ -1.04
MSH6-201ENST00000234420 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
MSH6-201ENST00000234420 ZNF843Q8N446 348 aa8.56□□□□□ -1.04
MSH6-201ENST00000234420 TECTAO75443 2155 aa8.56□□□□□ -1.04
MSH6-201ENST00000234420 TOMM6Q96B49 74 aa8.56□□□□□ -1.04
MSH6-201ENST00000234420 IGLV3-12A0A075B6K2 115 aa8.55□□□□□ -1.04
MSH6-201ENST00000234420 NANOS2P60321 138 aaKnown RBP8.55□□□□□ -1.04
MSH6-201ENST00000234420 SPRNQ5BIV9 151 aa8.55□□□□□ -1.04
MSH6-201ENST00000234420 FRMD6-AS1P0C7T7 363 aa8.55□□□□□ -1.04
MSH6-201ENST00000234420 CACNA1HO95180 2353 aa8.55□□□□□ -1.04
MSH6-201ENST00000234420 Q8N9W7 124 aa8.55□□□□□ -1.04
MSH6-201ENST00000234420 MRPS12O15235 138 aaKnown RBP8.54□□□□□ -1.04
MSH6-201ENST00000234420 COX7BP24311 80 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 IGLV3-32A0A0A0MS00 114 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.54□□□□□ -1.04
MSH6-201ENST00000234420 CIRBP-AS1Q8TBR5 109 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 PSPHP1O15172 72 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 NDUFA1O15239 70 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 FHL1Q13642 323 aa8.54□□□□□ -1.04
MSH6-201ENST00000234420 POM121L12Q8N7R1 296 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 RITA1Q96K30 269 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 KIR2DL5BQ8NHK3 375 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 TMEM263Q8WUH6 116 aaKnown RBP8.53□□□□□ -1.04
MSH6-201ENST00000234420 ZNF833PQ6ZTB9 187 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 IGHV1-58A0A0C4DH39 117 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 MIAQ16674 131 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 ATP5EP2Q5VTU8 51 aa8.53□□□□□ -1.04
MSH6-201ENST00000234420 CSPG4Q6UVK1 2322 aa8.52□□□□□ -1.05
MSH6-201ENST00000234420 FAM30AQ9NZY2 134 aa8.52□□□□□ -1.05
MSH6-201ENST00000234420 WT1P19544 449 aaPredicted RBP8.52□□□□□ -1.05
MSH6-201ENST00000234420 XGP55808 180 aa8.52□□□□□ -1.05
MSH6-201ENST00000234420 ADORA2A-AS1P86434 159 aa8.52□□□□□ -1.05
MSH6-201ENST00000234420 C3orf84H3BNL1 204 aa8.51□□□□□ -1.05
MSH6-201ENST00000234420 PTPRSQ13332 1948 aa8.51□□□□□ -1.05
MSH6-201ENST00000234420 LRP4O75096 1905 aa8.51□□□□□ -1.05
MSH6-201ENST00000234420 LINC00269Q8N2A0 174 aa8.51□□□□□ -1.05
MSH6-201ENST00000234420 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 C17orf58Q2M2W7 97 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 Q8N9L7 120 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 C4orf3Q8WVX3 66 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 PTPN13Q12923 2485 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 PLA2G2AP14555 144 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 LOC107984640A0A0U1RRK4 108 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 C14orf177Q52M58 125 aa8.5□□□□□ -1.05
MSH6-201ENST00000234420 WFDC13Q8IUB5 93 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 CSDC2Q9Y534 153 aaKnown RBP8.49□□□□□ -1.05
MSH6-201ENST00000234420 C2orf70A6NJV1 201 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 TRIAP1O43715 76 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 FLVCR1-AS1Q8TAF5 88 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 A0A0J9YXY3 114 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 ABCA2Q9BZC7 2435 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 C1orf158Q8N1D5 194 aa8.49□□□□□ -1.05
MSH6-201ENST00000234420 B3GALT5-AS1P59052 145 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 CEMP1Q6PRD7 247 aaPredicted RBP8.48□□□□□ -1.05
MSH6-201ENST00000234420 DCANP1Q8TF63 244 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 RPL37AP8A6NKH3 93 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 PRYO14603 147 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 INSL3P51460 131 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 ODF3L1Q8IXM7 274 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 PLA2G2EQ9NZK7 142 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 FSHBP01225 129 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 P0DMU3 169 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 FAM231AP0DMU4 169 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 FAM231CP0DMU5 169 aa8.48□□□□□ -1.05
MSH6-201ENST00000234420 MIFP14174 115 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 IGKV2-28A0A075B6P5 120 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 IGKV2D-28P01615 120 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 EBI3Q14213 229 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 OXLD1Q5BKU9 147 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 NAV3Q8IVL0 2385 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 PROK2Q9HC23 129 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 TRBV7-3A0A075B6L6 115 aa8.47□□□□□ -1.05
MSH6-201ENST00000234420 C22orf34Q6ZV56 151 aa8.46□□□□□ -1.05
MSH6-201ENST00000234420 CCKP06307 115 aa8.46□□□□□ -1.06
MSH6-201ENST00000234420 IGLV2-14P01704 120 aa8.46□□□□□ -1.06
MSH6-201ENST00000234420 ZNF503-AS2A6NEH8 195 aa8.46□□□□□ -1.06
MSH6-201ENST00000234420 FAM222AQ5U5X8 452 aa8.46□□□□□ -1.06
MSH6-201ENST00000234420 WFDC10AQ9H1F0 79 aa8.45□□□□□ -1.06
MSH6-201ENST00000234420 CRIPAKQ8N1N5 446 aa8.45□□□□□ -1.06
MSH6-201ENST00000234420 MUC6Q6W4X9 2439 aa8.45□□□□□ -1.06
MSH6-201ENST00000234420 LENEPQ9Y5L5 61 aa8.45□□□□□ -1.06
MSH6-201ENST00000234420 LINC00526Q96FQ7 95 aa8.45□□□□□ -1.06
MSH6-201ENST00000234420 FAM215AQ9Y5M1 114 aa8.44□□□□□ -1.06
MSH6-201ENST00000234420 IGLV5-52A0A0A0MRZ9 124 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms