RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 TSTD3H0UI37 97 aa13.06□□□□□ -0.32
SNX17-201ENST00000233575 K7EMI3 77 aa13.06□□□□□ -0.32
SNX17-201ENST00000233575 SCGB1D1O95968 90 aa13.06□□□□□ -0.32
SNX17-201ENST00000233575 RHOHQ15669 191 aa13.06□□□□□ -0.32
SNX17-201ENST00000233575 C12orf74Q32Q52 190 aa13.06□□□□□ -0.32
SNX17-201ENST00000233575 SPATA12Q7Z6I5 190 aa13.06□□□□□ -0.32
SNX17-201ENST00000233575 RPL36AP83881 106 aaKnown RBP13.06□□□□□ -0.32
SNX17-201ENST00000233575 RPL36ALQ969Q0 106 aaKnown RBP13.06□□□□□ -0.32
SNX17-201ENST00000233575 HTN3P15516 51 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 CRYBA4P53673 196 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 UBE2D3P61077 147 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 UBE2D2P62837 147 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 HSPB8Q9UJY1 196 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 ATP5G1P05496 136 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 RPL39P62891 51 aaKnown RBP13.05□□□□□ -0.32
SNX17-201ENST00000233575 C2orf66Q6UXQ4 117 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 Q8N976 141 aa13.05□□□□□ -0.32
SNX17-201ENST00000233575 PRO0255Q9UI72 69 aa13.04□□□□□ -0.32
SNX17-201ENST00000233575 COL7A1Q02388 2944 aa13.04□□□□□ -0.32
SNX17-201ENST00000233575 H0Y8G0 127 aa13.03□□□□□ -0.32
SNX17-201ENST00000233575 TOMM6Q96B49 74 aa13.03□□□□□ -0.32
SNX17-201ENST00000233575 PRADC1Q9BSG0 188 aa13.03□□□□□ -0.32
SNX17-201ENST00000233575 A0A0J9YY99 117 aa13.03□□□□□ -0.32
SNX17-201ENST00000233575 F5H768 121 aa13.03□□□□□ -0.32
SNX17-201ENST00000233575 VSIG2Q96IQ7 327 aa13.03□□□□□ -0.32
SNX17-201ENST00000233575 GYPEP15421 78 aa13.02□□□□□ -0.33
SNX17-201ENST00000233575 TEX48A0A1B0GUV7 120 aa13.01□□□□□ -0.33
SNX17-201ENST00000233575 SYS1-DBNDD2H3BUS1 97 aa13.01□□□□□ -0.33
SNX17-201ENST00000233575 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
SNX17-201ENST00000233575 Q6ZTC4 211 aa13.01□□□□□ -0.33
SNX17-201ENST00000233575 IFI27L1Q96BM0 104 aa13.01□□□□□ -0.33
SNX17-201ENST00000233575 MAP1LC3CQ9BXW4 147 aa13.01□□□□□ -0.33
SNX17-201ENST00000233575 PRKDCP78527 4128 aaKnown RBP13.01□□□□□ -0.33
SNX17-201ENST00000233575 TRAV26-1A0A087WT03 109 aa13□□□□□ -0.33
SNX17-201ENST00000233575 PAX4O43316 350 aa13□□□□□ -0.33
SNX17-201ENST00000233575 NANOS2P60321 138 aaKnown RBP13□□□□□ -0.33
SNX17-201ENST00000233575 COTL1Q14019 142 aa13□□□□□ -0.33
SNX17-201ENST00000233575 NTM-AS1Q6ZSK4 140 aa13□□□□□ -0.33
SNX17-201ENST00000233575 C20orf203Q8NBC4 194 aa13□□□□□ -0.33
SNX17-201ENST00000233575 CHCHD7Q9BUK0 85 aa13□□□□□ -0.33
SNX17-201ENST00000233575 CYSLTR1Q9Y271 337 aa13□□□□□ -0.33
SNX17-201ENST00000233575 DAZ4Q86SG3 579 aaKnown RBP13□□□□□ -0.33
SNX17-201ENST00000233575 DAZ3Q9NR90 486 aaKnown RBP13□□□□□ -0.33
SNX17-201ENST00000233575 MEGF8Q7Z7M0 2845 aa13□□□□□ -0.33
SNX17-201ENST00000233575 SCGB3A1Q96QR1 104 aa12.99□□□□□ -0.33
SNX17-201ENST00000233575 PMCHL2Q9BQD1 86 aa12.99□□□□□ -0.33
SNX17-201ENST00000233575 C11orf45Q8TAV5 145 aa12.98□□□□□ -0.33
SNX17-201ENST00000233575 B9D2Q9BPU9 175 aa12.98□□□□□ -0.33
SNX17-201ENST00000233575 ZMAT4Q9H898 229 aa12.98□□□□□ -0.33
SNX17-201ENST00000233575 A0A096LPF7 62 aa12.98□□□□□ -0.33
SNX17-201ENST00000233575 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.97□□□□□ -0.33
SNX17-201ENST00000233575 IGKV2-29A2NJV5 120 aaPredicted RBP12.97□□□□□ -0.33
SNX17-201ENST00000233575 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
SNX17-201ENST00000233575 ATP5LO75964 103 aa12.96□□□□□ -0.34
SNX17-201ENST00000233575 ERASQ7Z444 233 aa12.96□□□□□ -0.34
SNX17-201ENST00000233575 ATOH7Q8N100 152 aa12.96□□□□□ -0.34
SNX17-201ENST00000233575 PRO1933Q9H354 126 aa12.96□□□□□ -0.34
SNX17-201ENST00000233575 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.95□□□□□ -0.34
SNX17-201ENST00000233575 CEMP1Q6PRD7 247 aaPredicted RBP12.95□□□□□ -0.34
SNX17-201ENST00000233575 PET117Q6UWS5 81 aa12.95□□□□□ -0.34
SNX17-201ENST00000233575 OPRPNQ99935 248 aaPredicted RBP12.95□□□□□ -0.34
SNX17-201ENST00000233575 PRSS1P07477 247 aa12.95□□□□□ -0.34
SNX17-201ENST00000233575 G0S2P27469 103 aa12.94□□□□□ -0.34
SNX17-201ENST00000233575 ZC2HC1BQ5TFG8 222 aa12.94□□□□□ -0.34
SNX17-201ENST00000233575 TEX43Q6ZNM6 134 aa12.94□□□□□ -0.34
SNX17-201ENST00000233575 ATP6V0E2Q8NHE4 81 aa12.94□□□□□ -0.34
SNX17-201ENST00000233575 LINC01545Q5VT33 79 aa12.93□□□□□ -0.34
SNX17-201ENST00000233575 BAALCQ8WXS3 180 aa12.93□□□□□ -0.34
SNX17-201ENST00000233575 Q6ZN92 141 aa12.92□□□□□ -0.34
SNX17-201ENST00000233575 FAM104AQ969W3 186 aa12.92□□□□□ -0.34
SNX17-201ENST00000233575 GTSF1LQ9H1H1 148 aa12.92□□□□□ -0.34
SNX17-201ENST00000233575 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
SNX17-201ENST00000233575 UBE2D4Q9Y2X8 147 aa12.91□□□□□ -0.34
SNX17-201ENST00000233575 ODF1Q14990 250 aa12.91□□□□□ -0.34
SNX17-201ENST00000233575 STAB2Q8WWQ8 2551 aa12.9□□□□□ -0.34
SNX17-201ENST00000233575 TRBV6-8A0A0A6YYG3 113 aa12.9□□□□□ -0.34
SNX17-201ENST00000233575 C20orf202A1L168 122 aa12.9□□□□□ -0.34
SNX17-201ENST00000233575 MAJINQ3KP22 176 aa12.9□□□□□ -0.34
SNX17-201ENST00000233575 ZNF664Q8N3J9 261 aa12.9□□□□□ -0.34
SNX17-201ENST00000233575 CBY1Q9Y3M2 126 aa12.9□□□□□ -0.34
SNX17-201ENST00000233575 DEFB131BA0A096LNP1 70 aa12.89□□□□□ -0.35
SNX17-201ENST00000233575 LGALS9CQ6DKI2 356 aa12.89□□□□□ -0.35
SNX17-201ENST00000233575 TMEM141Q96I45 108 aa12.89□□□□□ -0.35
SNX17-201ENST00000233575 TRBV25-1A0A075B6N4 114 aa12.89□□□□□ -0.35
SNX17-201ENST00000233575 LINC01549A6NIU2 74 aa12.89□□□□□ -0.35
SNX17-201ENST00000233575 RNASE13Q5GAN3 156 aaKnown RBP12.89□□□□□ -0.35
SNX17-201ENST00000233575 IGLV4-3A0A075B6K6 122 aa12.88□□□□□ -0.35
SNX17-201ENST00000233575 TMEM243Q9BU79 118 aa12.88□□□□□ -0.35
SNX17-201ENST00000233575 ICOSQ9Y6W8 199 aa12.88□□□□□ -0.35
SNX17-201ENST00000233575 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
SNX17-201ENST00000233575 VAMP8Q9BV40 100 aa12.88□□□□□ -0.35
SNX17-201ENST00000233575 MRPL35Q9NZE8 188 aaKnown RBP12.88□□□□□ -0.35
SNX17-201ENST00000233575 PYGO1Q9Y3Y4 419 aa12.88□□□□□ -0.35
SNX17-201ENST00000233575 A0A087WX48 190 aa12.87□□□□□ -0.35
SNX17-201ENST00000233575 PRSS29PA6NIE9 313 aa12.87□□□□□ -0.35
SNX17-201ENST00000233575 PAM16Q9Y3D7 125 aa12.87□□□□□ -0.35
SNX17-201ENST00000233575 FGF6P10767 208 aa12.86□□□□□ -0.35
SNX17-201ENST00000233575 TRAV12-1A0A0B4J245 112 aa12.86□□□□□ -0.35
SNX17-201ENST00000233575 GAGE6Q13070 117 aa12.86□□□□□ -0.35
SNX17-201ENST00000233575 Q6ZUT4 128 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms