RNA–Protein interactions for RNA: ENST00000229769.2

FANCE-201, Transcript of FA complementation group E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FANCE, Length 2,554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCE-201ENST00000229769 MIAQ16674 131 aa17.42■□□□□ 0.38
FANCE-201ENST00000229769 MSMBP08118 114 aa17.41■□□□□ 0.38
FANCE-201ENST00000229769 Q6ZSV7 163 aa17.41■□□□□ 0.38
FANCE-201ENST00000229769 COX6CP09669 75 aa17.41■□□□□ 0.38
FANCE-201ENST00000229769 RNASE13Q5GAN3 156 aaKnown RBP17.41■□□□□ 0.38
FANCE-201ENST00000229769 TRGV11A0A075B6L2 103 aa17.4■□□□□ 0.38
FANCE-201ENST00000229769 VPS13CQ709C8 3753 aa17.4■□□□□ 0.38
FANCE-201ENST00000229769 NPC2P61916 151 aa17.39■□□□□ 0.38
FANCE-201ENST00000229769 CLEC2BQ92478 149 aa17.39■□□□□ 0.38
FANCE-201ENST00000229769 VSIG2Q96IQ7 327 aa17.39■□□□□ 0.37
FANCE-201ENST00000229769 A8MZ25 164 aa17.38■□□□□ 0.37
FANCE-201ENST00000229769 EDA2RQ9HAV5 297 aa17.38■□□□□ 0.37
FANCE-201ENST00000229769 IGHV4-30-2A0A087WSY4 118 aa17.38■□□□□ 0.37
FANCE-201ENST00000229769 IGHV3-73A0A0B4J1V6 119 aa17.37■□□□□ 0.37
FANCE-201ENST00000229769 LST1O00453 97 aa17.37■□□□□ 0.37
FANCE-201ENST00000229769 ATP5J2P56134 94 aa17.37■□□□□ 0.37
FANCE-201ENST00000229769 TMEM61Q8N0U2 210 aa17.37■□□□□ 0.37
FANCE-201ENST00000229769 PROK1P58294 105 aa17.36■□□□□ 0.37
FANCE-201ENST00000229769 C10orf99Q6UWK7 81 aa17.36■□□□□ 0.37
FANCE-201ENST00000229769 TINCRA0A1B0GVN0 87 aa17.36■□□□□ 0.37
FANCE-201ENST00000229769 GNLYP22749 145 aa17.36■□□□□ 0.37
FANCE-201ENST00000229769 MRPL23Q16540 153 aaKnown RBP17.35■□□□□ 0.37
FANCE-201ENST00000229769 SYNJ2BPP57105 145 aa17.35■□□□□ 0.37
FANCE-201ENST00000229769 AVPP01185 164 aa17.34■□□□□ 0.37
FANCE-201ENST00000229769 DOPEY2Q9Y3R5 2298 aa17.34■□□□□ 0.37
FANCE-201ENST00000229769 FAM240AA0A1B0GVK7 77 aa17.34■□□□□ 0.37
FANCE-201ENST00000229769 DEFB121Q5J5C9 76 aa17.34■□□□□ 0.37
FANCE-201ENST00000229769 HTN1P15515 57 aa17.33■□□□□ 0.36
FANCE-201ENST00000229769 DUX3Q96PT4 197 aa17.33■□□□□ 0.36
FANCE-201ENST00000229769 YAE1D1Q9NRH1 226 aa17.33■□□□□ 0.36
FANCE-201ENST00000229769 TMEM89A2RUT3 159 aa17.33■□□□□ 0.36
FANCE-201ENST00000229769 TNFRSF18Q9Y5U5 241 aa17.33■□□□□ 0.36
FANCE-201ENST00000229769 IGHV4-59P01825 116 aa17.32■□□□□ 0.36
FANCE-201ENST00000229769 RBMY1A1P0DJD3 496 aaKnown RBP17.32■□□□□ 0.36
FANCE-201ENST00000229769 RBMY1CP0DJD4 496 aa17.32■□□□□ 0.36
FANCE-201ENST00000229769 RBMY1FQ15415 496 aaKnown RBP17.32■□□□□ 0.36
FANCE-201ENST00000229769 UBE2D4Q9Y2X8 147 aa17.32■□□□□ 0.36
FANCE-201ENST00000229769 RNF152Q8N8N0 203 aa17.32■□□□□ 0.36
FANCE-201ENST00000229769 CHCHD7Q9BUK0 85 aa17.32■□□□□ 0.36
FANCE-201ENST00000229769 B4DSR2 109 aa17.31■□□□□ 0.36
FANCE-201ENST00000229769 SPANXA1Q9NS26 97 aa17.31■□□□□ 0.36
FANCE-201ENST00000229769 Q9UF83 564 aa17.31■□□□□ 0.36
FANCE-201ENST00000229769 TIMM17BO60830 172 aa17.3■□□□□ 0.36
FANCE-201ENST00000229769 DUX5Q96PT3 197 aa17.3■□□□□ 0.36
FANCE-201ENST00000229769 DEFB112Q30KQ8 113 aa17.29■□□□□ 0.36
FANCE-201ENST00000229769 DAND5Q8N907 189 aa17.29■□□□□ 0.36
FANCE-201ENST00000229769 SORL1Q92673 2214 aa17.28■□□□□ 0.36
FANCE-201ENST00000229769 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.28■□□□□ 0.36
FANCE-201ENST00000229769 IGKV2-29A2NJV5 120 aaPredicted RBP17.28■□□□□ 0.36
FANCE-201ENST00000229769 KNCNA6PVL3 124 aa17.28■□□□□ 0.36
FANCE-201ENST00000229769 COL12A1Q99715 3063 aa17.27■□□□□ 0.36
FANCE-201ENST00000229769 NACAE9PAV3 2078 aa17.26■□□□□ 0.35
FANCE-201ENST00000229769 Q6ZSN1 163 aa17.26■□□□□ 0.35
FANCE-201ENST00000229769 HOXD3P31249 432 aaPredicted RBP17.25■□□□□ 0.35
FANCE-201ENST00000229769 LINC00467Q9BRT7 94 aa17.25■□□□□ 0.35
FANCE-201ENST00000229769 CITED2Q99967 270 aaPredicted RBP17.25■□□□□ 0.35
FANCE-201ENST00000229769 CDKN2A-AS1Q9UH64 79 aa17.25■□□□□ 0.35
FANCE-201ENST00000229769 TRBV7-7A0A0K0K1E9 115 aa17.24■□□□□ 0.35
FANCE-201ENST00000229769 NDUFA1O15239 70 aa17.24■□□□□ 0.35
FANCE-201ENST00000229769 PRM2P04554 102 aa17.23■□□□□ 0.35
FANCE-201ENST00000229769 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.23■□□□□ 0.358e-11■■■■■ 40.5
FANCE-201ENST00000229769 TMEM101Q96IK0 257 aa17.22■□□□□ 0.35
FANCE-201ENST00000229769 DEFB131AP59861 70 aa17.21■□□□□ 0.35
FANCE-201ENST00000229769 CHCHD5Q9BSY4 110 aa17.21■□□□□ 0.35
FANCE-201ENST00000229769 IGLV5-45A0A087WSX0 123 aa17.2■□□□□ 0.34
FANCE-201ENST00000229769 IGHV3-38A0A0C4DH36 116 aa17.2■□□□□ 0.34
FANCE-201ENST00000229769 MEIG1Q5JSS6 88 aa17.2■□□□□ 0.34
FANCE-201ENST00000229769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.2■□□□□ 0.34
FANCE-201ENST00000229769 TIRAPP58753 221 aa17.2■□□□□ 0.34
FANCE-201ENST00000229769 ZNF415Q09FC8 603 aa17.2■□□□□ 0.34
FANCE-201ENST00000229769 LINC00308Q8TCZ7 52 aa17.19■□□□□ 0.34
FANCE-201ENST00000229769 CIRBPQ14011 172 aaKnown RBP17.19■□□□□ 0.34
FANCE-201ENST00000229769 UBE2E2Q96LR5 201 aa17.19■□□□□ 0.34
FANCE-201ENST00000229769 PIK3CD-AS1Q5SR53 167 aa17.18■□□□□ 0.34
FANCE-201ENST00000229769 SMIM20Q8N5G0 67 aa17.18■□□□□ 0.34
FANCE-201ENST00000229769 FAM110AQ9BQ89 295 aa17.18■□□□□ 0.34
FANCE-201ENST00000229769 PRORYQ9H606 182 aa17.18■□□□□ 0.34
FANCE-201ENST00000229769 COX7A2LO14548 114 aa17.16■□□□□ 0.34
FANCE-201ENST00000229769 COX6A2Q02221 97 aa17.16■□□□□ 0.34
FANCE-201ENST00000229769 Q9H8V8 135 aa17.16■□□□□ 0.34
FANCE-201ENST00000229769 RBMY1BA6NDE4 496 aaKnown RBP17.15■□□□□ 0.34
FANCE-201ENST00000229769 RBMY1EA6NEQ0 496 aaKnown RBP17.15■□□□□ 0.34
FANCE-201ENST00000229769 ACYP1P07311 99 aa17.15■□□□□ 0.34
FANCE-201ENST00000229769 RBMY1DP0C7P1 496 aaKnown RBP17.15■□□□□ 0.34
FANCE-201ENST00000229769 LINC01356Q8N9X3 169 aa17.15■□□□□ 0.34
FANCE-201ENST00000229769 CSPG4Q6UVK1 2322 aa17.15■□□□□ 0.34
FANCE-201ENST00000229769 CRYBG3Q68DQ2 2970 aa17.14■□□□□ 0.34
FANCE-201ENST00000229769 MAP1AP78559 2803 aaPredicted RBP17.14■□□□□ 0.33
FANCE-201ENST00000229769 IGHV3-53P01767 116 aa17.14■□□□□ 0.33
FANCE-201ENST00000229769 DNAJC30Q96LL9 226 aa17.14■□□□□ 0.33
FANCE-201ENST00000229769 A8MTW9 85 aa17.14■□□□□ 0.33
FANCE-201ENST00000229769 DSCR9P59020 149 aa17.14■□□□□ 0.33
FANCE-201ENST00000229769 IGLV5-39A0A0G2JS06 123 aa17.13■□□□□ 0.33
FANCE-201ENST00000229769 ZNF625Q96I27 306 aaPredicted RBP17.13■□□□□ 0.33
FANCE-201ENST00000229769 VPREB3Q9UKI3 123 aa17.13■□□□□ 0.33
FANCE-201ENST00000229769 IGHV3OR16-12A0A075B7B8 117 aa17.12■□□□□ 0.33
FANCE-201ENST00000229769 A0A0U1RRA0 63 aa17.12■□□□□ 0.33
FANCE-201ENST00000229769 SLURP1P55000 103 aa17.12■□□□□ 0.33
FANCE-201ENST00000229769 DGAT2L7PQ6IED9 249 aa17.12■□□□□ 0.33
FANCE-201ENST00000229769 SHISA2Q6UWI4 295 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms