RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 TMEM89A2RUT3 159 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 H3BMM0 161 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 RPL35AP18077 110 aaKnown RBP8.68□□□□□ -1.02
CCND1-201ENST00000227507 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 UBE2D1P51668 147 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 PRR9Q5T870 116 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 HRCT1Q6UXD1 115 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 CNFNQ9BYD5 112 aa8.68□□□□□ -1.02
CCND1-201ENST00000227507 FN1P02751 2386 aaKnown RBP8.67□□□□□ -1.02
CCND1-201ENST00000227507 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
CCND1-201ENST00000227507 LY6LH3BQJ8 138 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 TRGV11A0A075B6L2 103 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 RBAKDNA6NC62 111 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 VCYO14598 125 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 PPP1R17O96001 155 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 EBI3Q14213 229 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 PSMG3-AS1Q96PY0 264 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 SPANXA1Q9NS26 97 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 HECTD1Q9ULT8 2610 aa8.67□□□□□ -1.02
CCND1-201ENST00000227507 ZNF415Q09FC8 603 aa8.66□□□□□ -1.02
CCND1-201ENST00000227507 MRAPQ8TCY5 172 aa8.66□□□□□ -1.02
CCND1-201ENST00000227507 TOMM7Q9P0U1 55 aa8.66□□□□□ -1.02
CCND1-201ENST00000227507 V9GYY9 64 aa8.66□□□□□ -1.02
CCND1-201ENST00000227507 UBE2D3P61077 147 aa8.66□□□□□ -1.02
CCND1-201ENST00000227507 UBE2D2P62837 147 aa8.66□□□□□ -1.02
CCND1-201ENST00000227507 A0A0J9YXV3 536 aa8.65□□□□□ -1.02
CCND1-201ENST00000227507 HTN3P15516 51 aa8.65□□□□□ -1.02
CCND1-201ENST00000227507 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
CCND1-201ENST00000227507 SLURP1P55000 103 aa8.65□□□□□ -1.03
CCND1-201ENST00000227507 ZNF625Q96I27 306 aaPredicted RBP8.65□□□□□ -1.03
CCND1-201ENST00000227507 M0R2P5 195 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 INSP01308 110 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 ZNF876PQ49A33 203 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 DMXL1Q9Y485 3027 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 CSMD1Q96PZ7 3565 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 SLC25A29Q8N8R3 303 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.64□□□□□ -1.03
CCND1-201ENST00000227507 FAM236AA0A1B0GUQ0 79 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 FAM236BA0A1B0GV22 79 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 KIR2DL5BQ8NHK3 375 aa8.64□□□□□ -1.03
CCND1-201ENST00000227507 KLK5Q9Y337 293 aaPredicted RBP8.64□□□□□ -1.03
CCND1-201ENST00000227507 UBE2L6O14933 153 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 DAND5Q8N907 189 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 TMEM101Q96IK0 257 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 TRAV12-2A0A075B6T6 113 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 RS1O15537 224 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 CD28P10747 220 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 IGHV3-33P01772 117 aa8.63□□□□□ -1.03
CCND1-201ENST00000227507 IGHV4OR15-8A0A075B7B6 117 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 A0A087WW49 117 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 TINCRA0A1B0GVN0 87 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 AVPP01185 164 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 SUMO4Q6EEV6 95 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
CCND1-201ENST00000227507 ZNRF2Q8NHG8 242 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 C20orf173Q96LM9 149 aa8.62□□□□□ -1.03
CCND1-201ENST00000227507 LRBAP50851 2863 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 TIMM21Q9BVV7 248 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 LAMA5O15230 3695 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 C9orf66Q5T8R8 295 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 DNAL4O96015 105 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 HERVK_113P63121 156 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 C9orf47Q6ZRZ4 202 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 Q6ZSV7 163 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 ZNF575Q86XF7 245 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 CCDC140Q96MF4 163 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 XCL2Q9UBD3 114 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 KLK9Q9UKQ9 250 aa8.61□□□□□ -1.03
CCND1-201ENST00000227507 SPINK13Q1W4C9 94 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 ZFAND3Q9H8U3 227 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 CRYGDP07320 174 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 UNQ9165/PRO28630Q6UXU0 137 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 TMEM141Q96I45 108 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 TRGV4A0A0C4DH28 118 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 TRIAP1O43715 76 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 C4orf26Q17RF5 130 aa8.6□□□□□ -1.03
CCND1-201ENST00000227507 CEMP1Q6PRD7 247 aaPredicted RBP8.6□□□□□ -1.03
CCND1-201ENST00000227507 KNCNA6PVL3 124 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 K7EMT4 169 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 C4orf3Q8WVX3 66 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 LINC01546A6NGU7 62 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 TRBV12-3P01733 135 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 NDUFA12Q9UI09 145 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 IGLV4-69A0A075B6H9 119 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 A8MZ25 164 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 HILS1P60008 231 aa8.59□□□□□ -1.03
CCND1-201ENST00000227507 GAGE2AQ6NT46 116 aa8.58□□□□□ -1.04
CCND1-201ENST00000227507 SMR3AQ99954 134 aa8.58□□□□□ -1.04
CCND1-201ENST00000227507 TRBV10-2A0A0K0K1G8 114 aa8.58□□□□□ -1.04
CCND1-201ENST00000227507 Q8N6K4 173 aa8.58□□□□□ -1.04
CCND1-201ENST00000227507 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
CCND1-201ENST00000227507 ODF3Q96PU9 254 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 286 ms