RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 SMCR5Q8TEV8 140 aa10.42□□□□□ -0.74
SF1-201ENST00000227503 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
SF1-201ENST00000227503 OVOL1O14753 267 aa10.41□□□□□ -0.74
SF1-201ENST00000227503 FAM19A4Q96LR4 140 aa10.41□□□□□ -0.74
SF1-201ENST00000227503 IGHV4OR15-8A0A075B7B6 117 aa10.4□□□□□ -0.74
SF1-201ENST00000227503 A0A087WW49 117 aa10.4□□□□□ -0.74
SF1-201ENST00000227503 IGHV3-73A0A0B4J1V6 119 aa10.4□□□□□ -0.74
SF1-201ENST00000227503 PPP1R17O96001 155 aa10.4□□□□□ -0.74
SF1-201ENST00000227503 RS1O15537 224 aa10.4□□□□□ -0.74
SF1-201ENST00000227503 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.74
SF1-201ENST00000227503 TIMM21Q9BVV7 248 aa10.4□□□□□ -0.75
SF1-201ENST00000227503 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
SF1-201ENST00000227503 MYO18BQ8IUG5 2567 aa10.39□□□□□ -0.75
SF1-201ENST00000227503 TRBV27A0A0K0K1C4 114 aa10.39□□□□□ -0.75
SF1-201ENST00000227503 APRG1Q8IVJ8 170 aa10.39□□□□□ -0.75
SF1-201ENST00000227503 IGHV4-61A0A0C4DH41 118 aa10.38□□□□□ -0.75
SF1-201ENST00000227503 C2CD3Q4AC94 2353 aa10.38□□□□□ -0.75
SF1-201ENST00000227503 IGHG2P01859 326 aa10.38□□□□□ -0.75
SF1-201ENST00000227503 IGHV4-38-2P0DP08 117 aa10.38□□□□□ -0.75
SF1-201ENST00000227503 LY6EQ16553 131 aa10.38□□□□□ -0.75
SF1-201ENST00000227503 USMG5Q96IX5 58 aa10.38□□□□□ -0.75
SF1-201ENST00000227503 LST1O00453 97 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 POM121L12Q8N7R1 296 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 TMEM101Q96IK0 257 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 NDUFA12Q9UI09 145 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 H3BUA1 57 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 COX6CP09669 75 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 MED14OSP0DP75 135 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 ZNF625Q96I27 306 aaPredicted RBP10.37□□□□□ -0.75
SF1-201ENST00000227503 Q9UF83 564 aa10.37□□□□□ -0.75
SF1-201ENST00000227503 H3BT86 120 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 M0QY20 66 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 IGSF10Q6WRI0 2623 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 TRBV7-7A0A0K0K1E9 115 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 A6NDX4 124 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 CD28P10747 220 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 PROK1P58294 105 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 C20orf203Q8NBC4 194 aa10.36□□□□□ -0.75
SF1-201ENST00000227503 CSDC2Q9Y534 153 aaKnown RBP10.36□□□□□ -0.75
SF1-201ENST00000227503 NXPH4O95158 308 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 HTN1P15515 57 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 BLCAPP62952 87 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 HERVK_113P63121 156 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 RHPN1-AS1Q9BWJ2 59 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 H3BUX3 64 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 GNLYP22749 145 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 TMEM126AQ9H061 195 aa10.35□□□□□ -0.75
SF1-201ENST00000227503 PF4V1P10720 104 aa10.34□□□□□ -0.75
SF1-201ENST00000227503 PIMREGQ9BSJ6 248 aa10.34□□□□□ -0.75
SF1-201ENST00000227503 POLQO75417 2590 aa10.34□□□□□ -0.75
SF1-201ENST00000227503 USP9XQ93008 2570 aaPredicted RBP10.34□□□□□ -0.75
SF1-201ENST00000227503 PRM2P04554 102 aa10.34□□□□□ -0.75
SF1-201ENST00000227503 TMEM61Q8N0U2 210 aa10.34□□□□□ -0.75
SF1-201ENST00000227503 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
SF1-201ENST00000227503 NDUFA7O95182 113 aa10.33□□□□□ -0.76
SF1-201ENST00000227503 IGLV1-40P01703 118 aa10.33□□□□□ -0.76
SF1-201ENST00000227503 C10orf105Q8TEF2 133 aa10.33□□□□□ -0.76
SF1-201ENST00000227503 CYSTM1Q9H1C7 97 aa10.33□□□□□ -0.76
SF1-201ENST00000227503 MIAQ16674 131 aa10.33□□□□□ -0.76
SF1-201ENST00000227503 NSUN5P1Q3KNT7 163 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 CSPG4Q6UVK1 2322 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 C3orf22Q8N5N4 141 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 LINC01600Q96MT4 127 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 PRORYQ9H606 182 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 EDA2RQ9HAV5 297 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 KLLNB2CW77 178 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 Q8N2B8 174 aa10.32□□□□□ -0.76
SF1-201ENST00000227503 DAZ1Q9NQZ3 744 aaKnown RBP10.32□□□□□ -0.76
SF1-201ENST00000227503 FAM208BQ5VWN6 2430 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 FAM240AA0A1B0GVK7 77 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 KNCNA6PVL3 124 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 CFHR3Q02985 330 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 RHOHQ15669 191 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 NRGNQ92686 78 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
SF1-201ENST00000227503 A0A0J9YX75 114 aa10.31□□□□□ -0.76
SF1-201ENST00000227503 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
SF1-201ENST00000227503 TRBV6-5A0A0K0K1A5 114 aa10.3□□□□□ -0.76
SF1-201ENST00000227503 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.3□□□□□ -0.76
SF1-201ENST00000227503 IGKV2-29A2NJV5 120 aaPredicted RBP10.3□□□□□ -0.76
SF1-201ENST00000227503 DEFB121Q5J5C9 76 aa10.3□□□□□ -0.76
SF1-201ENST00000227503 FAM19A5Q7Z5A7 132 aaPredicted RBP10.3□□□□□ -0.76
SF1-201ENST00000227503 IGHV4-30-2A0A087WSY4 118 aa10.29□□□□□ -0.76
SF1-201ENST00000227503 IGHV3-16A0A0C4DH30 117 aa10.29□□□□□ -0.76
SF1-201ENST00000227503 DAZ2Q13117 558 aaKnown RBP10.29□□□□□ -0.76
SF1-201ENST00000227503 SPINK13Q1W4C9 94 aa10.29□□□□□ -0.76
SF1-201ENST00000227503 DAZ4Q86SG3 579 aaKnown RBP10.29□□□□□ -0.76
SF1-201ENST00000227503 CCL19Q99731 98 aa10.29□□□□□ -0.76
SF1-201ENST00000227503 DAZ3Q9NR90 486 aaKnown RBP10.29□□□□□ -0.76
SF1-201ENST00000227503 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
SF1-201ENST00000227503 DNAJC30Q96LL9 226 aa10.29□□□□□ -0.76
SF1-201ENST00000227503 IGHV3-38A0A0C4DH36 116 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 K7EMT4 169 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 VSIG2Q96IQ7 327 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 SPANXDQ9BXN6 97 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 SPANXCQ9NY87 97 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 hADV29S1A0JD25 119 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 EPG5Q9HCE0 2579 aa10.28□□□□□ -0.76
SF1-201ENST00000227503 HOXD3P31249 432 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms