RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 I3L3M4 83 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 SMAD5-AS1Q9Y6J3 95 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 IGKV3D-20A0A0C4DH25 116 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 SPANXN1Q5VSR9 72 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 PRIMA1Q86XR5 153 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 C5orf56Q8N8D9 126 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 CCL19Q99731 98 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 MYO18BQ8IUG5 2567 aa10.13□□□□□ -0.79
GABPB1-201ENST00000220429 CSMD2Q7Z408 3487 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 LEPROTO15243 131 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 CCDC140Q96MF4 163 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 NDUFC2-KCTD14E9PQ53 114 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 PRSS2P07478 247 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 PSMB8P28062 276 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 FHL2Q14192 279 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 ZFAND3Q9H8U3 227 aa10.12□□□□□ -0.79
GABPB1-201ENST00000220429 IGHV1-69DA0A0B4J2H0 117 aa10.11□□□□□ -0.79
GABPB1-201ENST00000220429 IGHV1-69P01742 117 aa10.11□□□□□ -0.79
GABPB1-201ENST00000220429 IGFL4Q6B9Z1 124 aa10.11□□□□□ -0.79
GABPB1-201ENST00000220429 RPL39LQ96EH5 51 aaKnown RBP10.11□□□□□ -0.79
GABPB1-201ENST00000220429 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
GABPB1-201ENST00000220429 IGHV4-4A0A075B6R2 117 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 CLEC19AQ6UXS0 136 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 SDHAF1A6NFY7 115 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 IGIPA6NJ69 53 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 EPM2AB3EWF7 344 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 NDUFC2O95298 119 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 Q6ZSV7 163 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 DAND5Q8N907 189 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 C11orf21Q9P2W6 132 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 MOB4Q9Y3A3 225 aa10.1□□□□□ -0.79
GABPB1-201ENST00000220429 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.1□□□□□ -0.797e-11■■■■■ 55.5
GABPB1-201ENST00000220429 WFDC11Q8NEX6 87 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 TP53TG1Q9Y2A0 90 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 IGHV4-30-2A0A087WSY4 118 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 A0A0J9YX75 114 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 A0A0J9YXY3 114 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 CLPSL1A2RUU4 121 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 IGHV4-38-2P0DP08 117 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 DAZ2Q13117 558 aaKnown RBP10.09□□□□□ -0.79
GABPB1-201ENST00000220429 DAZ4Q86SG3 579 aaKnown RBP10.09□□□□□ -0.79
GABPB1-201ENST00000220429 DAZ1Q9NQZ3 744 aaKnown RBP10.09□□□□□ -0.79
GABPB1-201ENST00000220429 DAZ3Q9NR90 486 aaKnown RBP10.09□□□□□ -0.79
GABPB1-201ENST00000220429 ZFYVE26Q68DK2 2539 aa10.09□□□□□ -0.79
GABPB1-201ENST00000220429 RNF223E7ERA6 249 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 BUB3O43684 328 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 ZNF876PQ49A33 203 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 AVPP01185 164 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 TIRAPP58753 221 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 C19orf54Q5BKX5 351 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 C9orf139Q6ZV77 190 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 SERP1Q9Y6X1 66 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 CSPG4Q6UVK1 2322 aa10.08□□□□□ -0.8
GABPB1-201ENST00000220429 USP24Q9UPU5 2620 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 USP17L23D6RBM5 183 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 LINC01561Q8N1V8 128 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 TMEM141Q96I45 108 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 IGHV3-64A0A075B6Q5 118 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 IGHV3-66A0A0C4DH42 116 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 C16orf92Q96LL3 132 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 C16orf95Q9H693 158 aa10.07□□□□□ -0.8
GABPB1-201ENST00000220429 IGHV3OR16-13A0A075B7E8 117 aa10.06□□□□□ -0.8
GABPB1-201ENST00000220429 IGHV3-74A0A0B4J1X5 117 aa10.06□□□□□ -0.8
GABPB1-201ENST00000220429 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
GABPB1-201ENST00000220429 TRAV12-3A0A0B4J271 114 aa10.06□□□□□ -0.8
GABPB1-201ENST00000220429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.06□□□□□ -0.8
GABPB1-201ENST00000220429 LITAFQ99732 161 aa10.06□□□□□ -0.8
GABPB1-201ENST00000220429 NACAE9PAV3 2078 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 A0A087WVE0 104 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 FAM223AQ8IWN6 122 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 IGHV3-49A0A0A0MS15 119 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 IGKV3D-7A0A0C4DH55 119 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 PRAC2D3DTV9 90 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 LY6EQ16553 131 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 RNF182Q8N6D2 247 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 TIMM17AQ99595 171 aa10.05□□□□□ -0.8
GABPB1-201ENST00000220429 PRRC2AP48634 2157 aaKnown RBP10.04□□□□□ -0.8
GABPB1-201ENST00000220429 INAFM2P0DMQ5 153 aa10.04□□□□□ -0.8
GABPB1-201ENST00000220429 RPL39P62891 51 aaKnown RBP10.04□□□□□ -0.8
GABPB1-201ENST00000220429 TMEM61Q8N0U2 210 aa10.04□□□□□ -0.8
GABPB1-201ENST00000220429 ANKRD17O75179 2603 aaKnown RBP10.04□□□□□ -0.8
GABPB1-201ENST00000220429 CENPEQ02224 2701 aa10.04□□□□□ -0.8
GABPB1-201ENST00000220429 FAM208BQ5VWN6 2430 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 MSMBP08118 114 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 BRK1Q8WUW1 75 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 FBN2P35556 2912 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 USP9YO00507 2555 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-201ENST00000220429 FAM223BA6NKX1 122 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 H3BUX3 64 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 M0R381 172 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 U3KQE9 123 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 ZANQ9Y493 2812 aa10.03□□□□□ -0.8
GABPB1-201ENST00000220429 ZNF462Q96JM2 2506 aa10.02□□□□□ -0.8
GABPB1-201ENST00000220429 IGF1P05019 195 aa10.02□□□□□ -0.81
GABPB1-201ENST00000220429 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
GABPB1-201ENST00000220429 ADAMTSL4-AS1Q5T5F5 129 aa10.02□□□□□ -0.81
GABPB1-201ENST00000220429 Q6JHZ5 121 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms