RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 M0R2P5 195 aa12.64□□□□□ -0.39
USB1-201ENST00000219281 Q5PR19 223 aa12.64□□□□□ -0.39
USB1-201ENST00000219281 FAM104AQ969W3 186 aa12.64□□□□□ -0.39
USB1-201ENST00000219281 BEX4Q9NWD9 120 aaPredicted RBP12.64□□□□□ -0.39
USB1-201ENST00000219281 ERG28Q9UKR5 140 aa12.64□□□□□ -0.39
USB1-201ENST00000219281 CREBBPQ92793 2442 aa12.64□□□□□ -0.39
USB1-201ENST00000219281 A0A0J9YXY3 114 aa12.63□□□□□ -0.39
USB1-201ENST00000219281 ELANEP08246 267 aa12.63□□□□□ -0.39
USB1-201ENST00000219281 IGHV3-30-3P0DP02 117 aa12.63□□□□□ -0.39
USB1-201ENST00000219281 DEFB131AP59861 70 aa12.63□□□□□ -0.39
USB1-201ENST00000219281 RNASE13Q5GAN3 156 aaKnown RBP12.63□□□□□ -0.39
USB1-201ENST00000219281 SORL1Q92673 2214 aa12.63□□□□□ -0.39
USB1-201ENST00000219281 ANKRD29Q8N6D5 301 aa12.63□□□□□ -0.39
USB1-201ENST00000219281 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 CIDEAO60543 219 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 Q6YL49 198 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 KRTAP1-3Q8IUG1 177 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 UBE2E2Q96LR5 201 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 Q9UF83 564 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 VPREB3Q9UKI3 123 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 PYGO1Q9Y3Y4 419 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 TNFRSF18Q9Y5U5 241 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 SLURP1P55000 103 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 DEFB136Q30KP8 78 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 C18orf65Q6ZTR6 163 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 LRRC75A-AS1Q8N1F1 130 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 TIMM21Q9BVV7 248 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 ZNF702PQ9H963 129 aa12.62□□□□□ -0.39
USB1-201ENST00000219281 TRAV8-3A0A0A6YYJ7 113 aa12.61□□□□□ -0.39
USB1-201ENST00000219281 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
USB1-201ENST00000219281 EDA2RQ9HAV5 297 aa12.61□□□□□ -0.39
USB1-201ENST00000219281 PRRC2AP48634 2157 aaKnown RBP12.61□□□□□ -0.39
USB1-201ENST00000219281 MT-ATP8P03928 68 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 MRPS36P82909 103 aaKnown RBP12.6□□□□□ -0.39
USB1-201ENST00000219281 Q96MF0 132 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.6□□□□□ -0.39
USB1-201ENST00000219281 A0A1B0GV72 72 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 RBMY1BA6NDE4 496 aaKnown RBP12.6□□□□□ -0.39
USB1-201ENST00000219281 RBMY1EA6NEQ0 496 aaKnown RBP12.6□□□□□ -0.39
USB1-201ENST00000219281 C9JAW5 83 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 SLC25A20O43772 301 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 RBMY1DP0C7P1 496 aaKnown RBP12.6□□□□□ -0.39
USB1-201ENST00000219281 Q1RN00 199 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 Q6ZSN1 163 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 TENM4Q6N022 2769 aa12.6□□□□□ -0.39
USB1-201ENST00000219281 SPINK8P0C7L1 97 aa12.59□□□□□ -0.39
USB1-201ENST00000219281 CRYBA4P53673 196 aa12.59□□□□□ -0.39
USB1-201ENST00000219281 H3BMM0 161 aa12.59□□□□□ -0.39
USB1-201ENST00000219281 XGP55808 180 aa12.59□□□□□ -0.39
USB1-201ENST00000219281 CKS1BP61024 79 aa12.58□□□□□ -0.4
USB1-201ENST00000219281 Q6ZUT4 128 aa12.58□□□□□ -0.4
USB1-201ENST00000219281 LITAFQ99732 161 aa12.58□□□□□ -0.4
USB1-201ENST00000219281 TLN2Q9Y4G6 2542 aa12.57□□□□□ -0.4
USB1-201ENST00000219281 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
USB1-201ENST00000219281 IGHV1-58A0A0C4DH39 117 aa12.57□□□□□ -0.4
USB1-201ENST00000219281 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
USB1-201ENST00000219281 PRSS2P07478 247 aa12.57□□□□□ -0.4
USB1-201ENST00000219281 CHCHD7Q9BUK0 85 aa12.57□□□□□ -0.4
USB1-201ENST00000219281 A8MZ25 164 aa12.57□□□□□ -0.4
USB1-201ENST00000219281 HIST2H2BCQ6DN03 193 aa12.57□□□□□ -0.4
USB1-201ENST00000219281 ADAMTSL4-AS1Q5T5F5 129 aa12.56□□□□□ -0.4
USB1-201ENST00000219281 NDUFA12Q9UI09 145 aa12.56□□□□□ -0.4
USB1-201ENST00000219281 UBE2D4Q9Y2X8 147 aa12.56□□□□□ -0.4
USB1-201ENST00000219281 ZNF415Q09FC8 603 aa12.55□□□□□ -0.4
USB1-201ENST00000219281 IGHV3-38A0A0C4DH36 116 aa12.55□□□□□ -0.4
USB1-201ENST00000219281 TINCRA0A1B0GVN0 87 aa12.55□□□□□ -0.4
USB1-201ENST00000219281 A8MTW9 85 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 ATXN8Q156A1 80 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 TMEM61Q8N0U2 210 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 NPC2P61916 151 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 LINC01587Q99440 93 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 SPANXA1Q9NS26 97 aa12.54□□□□□ -0.4
USB1-201ENST00000219281 ITPR3Q14573 2671 aa12.53□□□□□ -0.4
USB1-201ENST00000219281 TRIAP1O43715 76 aa12.53□□□□□ -0.4
USB1-201ENST00000219281 CCDC168Q8NDH2 2452 aa12.52□□□□□ -0.4
USB1-201ENST00000219281 M0QXV9 152 aa12.52□□□□□ -0.41
USB1-201ENST00000219281 LINC01620Q4KN68 170 aa12.52□□□□□ -0.41
USB1-201ENST00000219281 WFDC11Q8NEX6 87 aa12.52□□□□□ -0.41
USB1-201ENST00000219281 TRBV30A0A0K0K1B3 111 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 SPANXCQ9NY87 97 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 PIK3CD-AS1Q5SR53 167 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 HIST2H2BDQ6DRA6 164 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 C11orf72Q8NBR9 251 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
USB1-201ENST00000219281 SONP18583 2426 aaKnown RBP12.51□□□□□ -0.41
USB1-201ENST00000219281 MIAQ16674 131 aa12.5□□□□□ -0.41
USB1-201ENST00000219281 GEMIN7Q9H840 131 aaKnown RBP12.5□□□□□ -0.41
USB1-201ENST00000219281 AKAP9Q99996 3911 aa12.5□□□□□ -0.41
USB1-201ENST00000219281 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
USB1-201ENST00000219281 Q6ZSV7 163 aa12.5□□□□□ -0.41
USB1-201ENST00000219281 NTN5Q8WTR8 489 aaPredicted RBP12.5□□□□□ -0.41
USB1-201ENST00000219281 PEMTQ9UBM1 199 aa12.5□□□□□ -0.41
USB1-201ENST00000219281 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
USB1-201ENST00000219281 NACAE9PAV3 2078 aa12.49□□□□□ -0.41
USB1-201ENST00000219281 TMEM262E9PQX1 116 aa12.49□□□□□ -0.41
USB1-201ENST00000219281 IGHV3-53P01767 116 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms