RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 EPG5Q9HCE0 2579 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 COX7BP24311 80 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 COX8CQ7Z4L0 72 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 UPK3BQ9BT76 320 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 IGHV4OR15-8A0A075B7B6 117 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 A0A087WW49 117 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 GATA1P15976 413 aaPredicted RBP3.35□□□□□ -1.87
CHD9-201ENST00000219084 RPL39P62891 51 aaKnown RBP3.35□□□□□ -1.87
CHD9-201ENST00000219084 DEFB112Q30KQ8 113 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 A6NDX4 124 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 NXPH4O95158 308 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 PRR30Q53SZ7 412 aaPredicted RBP3.35□□□□□ -1.87
CHD9-201ENST00000219084 BRI3O95415 125 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 CFHR3Q02985 330 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 ZFAND2AQ8N6M9 145 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 ZNF580Q9UK33 172 aa3.35□□□□□ -1.87
CHD9-201ENST00000219084 PLA2G5P39877 138 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 Q8N7P7 452 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 SPTBN4Q9H254 2564 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 NDUFC2-KCTD14E9PQ53 114 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 IGLV2-11P01706 119 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 IGHV3-30P01768 117 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 IGHV4-59P01825 116 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 IGHV3-30-5P0DP03 117 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 CCL18P55774 89 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 IL17DQ8TAD2 202 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 CCDC140Q96MF4 163 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 PROP1O75360 226 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 NDUFA7O95182 113 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 PRO0255Q9UI72 69 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 A0A0J9YY99 117 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 F8WDY8 70 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
CHD9-201ENST00000219084 MSRB1Q9NZV6 116 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 LECT2O14960 151 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 GDF5OSQ5U4N7 250 aa3.34□□□□□ -1.87
CHD9-201ENST00000219084 RBX1P62877 108 aa3.34□□□□□ -1.88
CHD9-201ENST00000219084 RNASE13Q5GAN3 156 aaKnown RBP3.34□□□□□ -1.88
CHD9-201ENST00000219084 NRACQ8N912 160 aa3.34□□□□□ -1.88
CHD9-201ENST00000219084 POLQO75417 2590 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 IGKV2D-24A0A075B6R9 120 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 FAM236DA0A1B0GTK5 79 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 M0QY20 66 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 FAM236CP0DP71 79 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 RPL18AQ02543 176 aaKnown RBP3.33□□□□□ -1.88
CHD9-201ENST00000219084 CFAP126Q5VTH2 177 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 C2orf91Q6ZV80 131 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 MIR7-3HGQ8N6C7 128 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 SERP2Q8N6R1 65 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 ZFAND3Q9H8U3 227 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 SELENOKQ9Y6D0 94 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 OTOGLQ3ZCN5 2332 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 CCDC168Q8NDH2 2452 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 BRWD1-AS2P59051 145 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 SPRNQ5BIV9 151 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 TRBV6-4A0A1B0GX49 114 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 CHKB-CPT1BH3BT56 60 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 SLURP1P55000 103 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 SEM1Q6ZVN7 128 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 CLEC2BQ92478 149 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 RNF185Q96GF1 192 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 CACNA1AO00555 2505 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 GPR179Q6PRD1 2367 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 NAV2Q8IVL1 2488 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 TEX49A0A1B0GTD5 131 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 E7EUB6 86 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 LST1O00453 97 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 SPAG11BQ08648 103 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 PRR15LQ9BU68 103 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 PRORYQ9H606 182 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 PRAC2D3DTV9 90 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 IGHV3-33P01772 117 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 LINC00308Q8TCZ7 52 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 K7EQG2 157 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 B9D2Q9BPU9 175 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 MAP6D1Q9H9H5 199 aa3.33□□□□□ -1.88
CHD9-201ENST00000219084 USP9YO00507 2555 aaPredicted RBP3.32□□□□□ -1.88
CHD9-201ENST00000219084 IGLV4-3A0A075B6K6 122 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 IGHV4-38-2P0DP08 117 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 Q6ZPA2 131 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 WFDC9Q8NEX5 89 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 DHRS4-AS1Q9P1J3 65 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 LINC01546A6NGU7 62 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 KLLNB2CW77 178 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 PTH2Q96A98 100 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 TP53TG3Q9ULZ0 132 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 C5orf38Q86SI9 138 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 DEFB104AQ8WTQ1 72 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 SONP18583 2426 aaKnown RBP3.32□□□□□ -1.88
CHD9-201ENST00000219084 ACACBO00763 2458 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 BDP1A6H8Y1 2624 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 IGHV4-61A0A0C4DH41 118 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 PRB4P10163 310 aaPredicted RBP3.32□□□□□ -1.88
CHD9-201ENST00000219084 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
CHD9-201ENST00000219084 MYO18BQ8IUG5 2567 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 UBR5O95071 2799 aaPredicted RBP3.32□□□□□ -1.88
CHD9-201ENST00000219084 TRIAP1O43715 76 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 ADORA2A-AS1P86434 159 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 IGKV3D-7A0A0C4DH55 119 aa3.32□□□□□ -1.88
CHD9-201ENST00000219084 C10orf142B7Z368 130 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms