RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 TCAPO15273 167 aa18.66■□□□□ 0.58
CHMP4B-201ENST00000217402 IFI27P40305 119 aaPredicted RBP18.66■□□□□ 0.58
CHMP4B-201ENST00000217402 C18orf32Q8TCD1 76 aa18.66■□□□□ 0.58
CHMP4B-201ENST00000217402 Q8N8P6 123 aa18.65■□□□□ 0.58
CHMP4B-201ENST00000217402 CHCHD5Q9BSY4 110 aa18.65■□□□□ 0.58
CHMP4B-201ENST00000217402 UPK3BQ9BT76 320 aa18.65■□□□□ 0.58
CHMP4B-201ENST00000217402 PRSS3P2Q8NHM4 247 aa18.63■□□□□ 0.57
CHMP4B-201ENST00000217402 TMEM243Q9BU79 118 aa18.63■□□□□ 0.57
CHMP4B-201ENST00000217402 NXT2Q9NPJ8 142 aaKnown RBP18.63■□□□□ 0.57
CHMP4B-201ENST00000217402 CHCHD7Q9BUK0 85 aa18.62■□□□□ 0.57
CHMP4B-201ENST00000217402 SIVA1O15304 175 aa18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 GAGE6Q13070 117 aa18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 Q9H8V8 135 aa18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 ALMS1Q8TCU4 4167 aa18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 IGKV2-29A2NJV5 120 aaPredicted RBP18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 Q8N3U1 123 aa18.6■□□□□ 0.57
CHMP4B-201ENST00000217402 TMEM262E9PQX1 116 aa18.58■□□□□ 0.56
CHMP4B-201ENST00000217402 UBE2L6O14933 153 aa18.58■□□□□ 0.56
CHMP4B-201ENST00000217402 FA2HQ7L5A8 372 aa18.58■□□□□ 0.56
CHMP4B-201ENST00000217402 NIT1Q86X76 327 aa18.58■□□□□ 0.56
CHMP4B-201ENST00000217402 ESDP10768 282 aa18.57■□□□□ 0.56
CHMP4B-201ENST00000217402 IGHV3-30P01768 117 aa18.56■□□□□ 0.56
CHMP4B-201ENST00000217402 IGHV3-33P01772 117 aa18.56■□□□□ 0.56
CHMP4B-201ENST00000217402 IGHV3-30-3P0DP02 117 aa18.56■□□□□ 0.56
CHMP4B-201ENST00000217402 IGHV3-30-5P0DP03 117 aa18.56■□□□□ 0.56
CHMP4B-201ENST00000217402 LAGE3Q14657 143 aa18.56■□□□□ 0.56
CHMP4B-201ENST00000217402 VPS13DQ5THJ4 4388 aa18.54■□□□□ 0.56
CHMP4B-201ENST00000217402 A0A087WX48 190 aa18.54■□□□□ 0.56
CHMP4B-201ENST00000217402 DNAH10OSP0CZ25 163 aa18.54■□□□□ 0.56
CHMP4B-201ENST00000217402 MPV17L2Q567V2 206 aa18.54■□□□□ 0.56
CHMP4B-201ENST00000217402 RNASEKQ6P5S7 137 aaKnown RBP18.54■□□□□ 0.56
CHMP4B-201ENST00000217402 URB1-AS1Q96HZ7 61 aa18.54■□□□□ 0.56
CHMP4B-201ENST00000217402 LCE6AA0A183 80 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BKO60814 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BJP06899 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BOP23527 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BBP33778 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BDP58876 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BCP62807 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST2H2BEQ16778 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 ORMDL2Q53FV1 153 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 BAGE3Q86Y29 109 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BHQ93079 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BNQ99877 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 HIST1H2BMQ99879 126 aa18.53■□□□□ 0.56
CHMP4B-201ENST00000217402 K7EMI3 77 aa18.52■□□□□ 0.56
CHMP4B-201ENST00000217402 LINC01556Q5JQF7 62 aa18.52■□□□□ 0.56
CHMP4B-201ENST00000217402 C20orf203Q8NBC4 194 aa18.52■□□□□ 0.56
CHMP4B-201ENST00000217402 C1orf196B1AJZ1 125 aa18.52■□□□□ 0.55
CHMP4B-201ENST00000217402 LINC00614P0C842 121 aa18.52■□□□□ 0.55
CHMP4B-201ENST00000217402 RPL39P62891 51 aaKnown RBP18.52■□□□□ 0.55
CHMP4B-201ENST00000217402 Q8N976 141 aa18.52■□□□□ 0.55
CHMP4B-201ENST00000217402 AP5S1Q9NUS5 200 aa18.52■□□□□ 0.55
CHMP4B-201ENST00000217402 DNAH1Q9P2D7 4330 aa18.52■□□□□ 0.55
CHMP4B-201ENST00000217402 Q0VG73 95 aa18.51■□□□□ 0.55
CHMP4B-201ENST00000217402 LINC01546A6NGU7 62 aa18.5■□□□□ 0.55
CHMP4B-201ENST00000217402 FGF6P10767 208 aa18.5■□□□□ 0.55
CHMP4B-201ENST00000217402 RAB5BP61020 215 aa18.5■□□□□ 0.55
CHMP4B-201ENST00000217402 PKIAP61925 76 aa18.5■□□□□ 0.55
CHMP4B-201ENST00000217402 RBX1P62877 108 aa18.5■□□□□ 0.55
CHMP4B-201ENST00000217402 AMMECR1LQ6DCA0 310 aa18.5■□□□□ 0.55
CHMP4B-201ENST00000217402 H7C423 109 aa18.49■□□□□ 0.55
CHMP4B-201ENST00000217402 BTF3P20290 206 aaKnown RBP18.49■□□□□ 0.55
CHMP4B-201ENST00000217402 TMEM18Q96B42 140 aa18.49■□□□□ 0.55
CHMP4B-201ENST00000217402 M0R2N4 97 aa18.47■□□□□ 0.55
CHMP4B-201ENST00000217402 C2orf66Q6UXQ4 117 aa18.47■□□□□ 0.55
CHMP4B-201ENST00000217402 NBDYA0A0U1RRE5 68 aa18.46■□□□□ 0.55
CHMP4B-201ENST00000217402 KRTAP1-5Q9BYS1 174 aa18.46■□□□□ 0.55
CHMP4B-201ENST00000217402 CYSLTR1Q9Y271 337 aa18.46■□□□□ 0.55
CHMP4B-201ENST00000217402 IGLV4-60A0A075B6I1 120 aa18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 PMCHL1Q16048 86 aa18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 UBE2D4Q9Y2X8 147 aa18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 SERF1AO75920 110 aa18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 ANGP03950 147 aaKnown RBP18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 CHCHD1Q96BP2 118 aaKnown RBP18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 KLK12Q9UKR0 248 aa18.45■□□□□ 0.54
CHMP4B-201ENST00000217402 TRAV9-2A0A087WT02 112 aa18.44■□□□□ 0.54
CHMP4B-201ENST00000217402 MRPL52Q86TS9 123 aaKnown RBP18.44■□□□□ 0.54
CHMP4B-201ENST00000217402 A0A1B0GUV1 79 aa18.43■□□□□ 0.54
CHMP4B-201ENST00000217402 ZNF25P17030 456 aaPredicted RBP18.43■□□□□ 0.54
CHMP4B-201ENST00000217402 LINC00310P59036 64 aa18.43■□□□□ 0.54
CHMP4B-201ENST00000217402 TTC32Q5I0X7 151 aa18.43■□□□□ 0.54
CHMP4B-201ENST00000217402 OR5A1Q8NGJ0 315 aa18.43■□□□□ 0.54
CHMP4B-201ENST00000217402 TMEM101Q96IK0 257 aa18.43■□□□□ 0.54
CHMP4B-201ENST00000217402 DGAT2L7PQ6IED9 249 aa18.42■□□□□ 0.54
CHMP4B-201ENST00000217402 C10orf126Q8N4M7 172 aa18.41■□□□□ 0.54
CHMP4B-201ENST00000217402 HSBP1O75506 76 aa18.41■□□□□ 0.54
CHMP4B-201ENST00000217402 G0S2P27469 103 aa18.41■□□□□ 0.54
CHMP4B-201ENST00000217402 SMAGPQ0VAQ4 97 aa18.41■□□□□ 0.54
CHMP4B-201ENST00000217402 CLPSL2Q6UWE3 100 aa18.41■□□□□ 0.54
CHMP4B-201ENST00000217402 TOMM6Q96B49 74 aa18.41■□□□□ 0.54
CHMP4B-201ENST00000217402 KMT2AQ03164 3969 aa18.4■□□□□ 0.54
CHMP4B-201ENST00000217402 A0A096LNJ9 63 aa18.4■□□□□ 0.54
CHMP4B-201ENST00000217402 SPANXA1Q9NS26 97 aa18.4■□□□□ 0.54
CHMP4B-201ENST00000217402 LINC00269Q8N2A0 174 aa18.39■□□□□ 0.53
CHMP4B-201ENST00000217402 TIMM21Q9BVV7 248 aa18.39■□□□□ 0.53
CHMP4B-201ENST00000217402 KMT2CQ8NEZ4 4911 aaKnown RBP18.39■□□□□ 0.53
CHMP4B-201ENST00000217402 NUPR1O60356 82 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms