RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 TINCRA0A1B0GVN0 87 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 ZNRF2Q8NHG8 242 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 IGHV7-4-1A0A0J9YVY3 117 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 A0A0J9YY99 117 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 TRACP01848 142 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 MRPL23Q16540 153 aaKnown RBP8.78□□□□□ -1
DNMT3B-201ENST00000201963 NEXN-AS1Q8NBZ9 246 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 TIMM17AQ99595 171 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 PEMTQ9UBM1 199 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 GATA3P23771 443 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 LAMTOR3Q9UHA4 124 aa8.78□□□□□ -1
DNMT3B-201ENST00000201963 LY6G6DO95868 133 aa8.77□□□□□ -1
DNMT3B-201ENST00000201963 HOXD3P31249 432 aaPredicted RBP8.77□□□□□ -1
DNMT3B-201ENST00000201963 IGF1P05019 195 aa8.77□□□□□ -1.01
DNMT3B-201ENST00000201963 S100A7L2Q5SY68 101 aa8.77□□□□□ -1.01
DNMT3B-201ENST00000201963 XCL2Q9UBD3 114 aa8.77□□□□□ -1.01
DNMT3B-201ENST00000201963 TET2Q6N021 2002 aaPredicted RBP8.77□□□□□ -1.01
DNMT3B-201ENST00000201963 RHODO00212 210 aa8.77□□□□□ -1.01
DNMT3B-201ENST00000201963 OVOL2Q9BRP0 275 aa8.77□□□□□ -1.01
DNMT3B-201ENST00000201963 SLC25A29Q8N8R3 303 aa8.76□□□□□ -1.01
DNMT3B-201ENST00000201963 H3BT86 120 aa8.76□□□□□ -1.01
DNMT3B-201ENST00000201963 TRBV7-3A0A075B6L6 115 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 CENPVL3A0A0U1RRI6 287 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 HOXB4P17483 251 aaPredicted RBP8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 MALP21145 153 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 TMEM126AQ9H061 195 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 PCSK5Q92824 1860 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 IGHV3-30-3P0DP02 117 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 DNAJC30Q96LL9 226 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 LOC400499M0QZD8 3231 aa8.75□□□□□ -1.01
DNMT3B-201ENST00000201963 TRAV4A0A0B4J268 109 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 IGKV3D-7A0A0C4DH55 119 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 CRYGBP07316 175 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 LGALS9O00182 355 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 ACYP1P07311 99 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 DEFB121Q5J5C9 76 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 INSP01308 110 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 STAB1Q9NY15 2570 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 C11orf21Q9P2W6 132 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 SMAD5-AS1Q9Y6J3 95 aa8.74□□□□□ -1.01
DNMT3B-201ENST00000201963 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
DNMT3B-201ENST00000201963 UNQ9165/PRO28630Q6UXU0 137 aa8.73□□□□□ -1.01
DNMT3B-201ENST00000201963 NRACQ8N912 160 aa8.73□□□□□ -1.01
DNMT3B-201ENST00000201963 NXPH4O95158 308 aa8.73□□□□□ -1.01
DNMT3B-201ENST00000201963 IGHV3-33P01772 117 aa8.73□□□□□ -1.01
DNMT3B-201ENST00000201963 LMO4P61968 165 aa8.73□□□□□ -1.01
DNMT3B-201ENST00000201963 HERVK_113P63121 156 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 C20orf203Q8NBC4 194 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 SPANXDQ9BXN6 97 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 A0A1B0GX51 115 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 J3QLI3 93 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 IGHV4-31P0DP07 118 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 HAMPP81172 84 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 CFHR3Q02985 330 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 MDFICQ9P1T7 246 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 CCDC179H3BU77 68 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 HTN3P15516 51 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 Q6ZS46 218 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 AJUBAQ96IF1 538 aa8.72□□□□□ -1.01
DNMT3B-201ENST00000201963 TRAV13-2A0A0B4J235 113 aa8.71□□□□□ -1.01
DNMT3B-201ENST00000201963 A0A0J9YXY3 114 aa8.71□□□□□ -1.01
DNMT3B-201ENST00000201963 LINC01548A6NM66 108 aa8.71□□□□□ -1.01
DNMT3B-201ENST00000201963 TRBV12-3P01733 135 aa8.71□□□□□ -1.02
DNMT3B-201ENST00000201963 BLCAPP62952 87 aa8.71□□□□□ -1.02
DNMT3B-201ENST00000201963 CCDC140Q96MF4 163 aa8.71□□□□□ -1.02
DNMT3B-201ENST00000201963 UBL5Q9BZL1 73 aa8.71□□□□□ -1.02
DNMT3B-201ENST00000201963 A0A0B4J2C4 111 aa8.7□□□□□ -1.02
DNMT3B-201ENST00000201963 TRIAP1O43715 76 aa8.7□□□□□ -1.02
DNMT3B-201ENST00000201963 MRPS12O15235 138 aaKnown RBP8.7□□□□□ -1.02
DNMT3B-201ENST00000201963 C11orf71Q6IPW1 123 aa8.7□□□□□ -1.02
DNMT3B-201ENST00000201963 NBEAQ8NFP9 2946 aa8.7□□□□□ -1.02
DNMT3B-201ENST00000201963 LRRC75A-AS1Q8N1F1 130 aa8.7□□□□□ -1.02
DNMT3B-201ENST00000201963 FSTL3O95633 263 aa8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 Q6ZQT7 251 aa8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 DCHS1Q96JQ0 3298 aa8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 HIST2H2BDQ6DRA6 164 aa8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 MED14OSP0DP75 135 aa8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 RPL35AP18077 110 aaKnown RBP8.69□□□□□ -1.02
DNMT3B-201ENST00000201963 J3KT08 172 aa8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 IGHV3-30P01768 117 aa8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 IGHV3-30-5P0DP03 117 aa8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 TMEM243Q9BU79 118 aa8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 ATOX1O00244 68 aa8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 ZNF22P17026 224 aaPredicted RBP8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 ITPR2Q14571 2701 aa8.68□□□□□ -1.02
DNMT3B-201ENST00000201963 DEFB130BP0DP73 79 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 DEFB130AP0DP74 79 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 LINC00643Q86TS7 51 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 ZFAND2AQ8N6M9 145 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 Q9HAA7 133 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 EXPH5Q8NEV8 1989 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 RPL32P62910 135 aaKnown RBP8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 C5orf56Q8N8D9 126 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 ZMAT4Q9H898 229 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
DNMT3B-201ENST00000201963 P0DMU3 169 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms