RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 H0Y9J4 135 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 LECT2O14960 151 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 LYPD2Q6UXB3 125 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 CTSGP08311 255 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 IGHV3-30-3P0DP02 117 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 AMTNQ6UX39 209 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 IGKV1-17P01599 117 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 TRAV26-2A0A0B4J265 109 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 CNFNQ9BYD5 112 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 DEFB113Q30KQ7 82 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 SMAD5-AS1Q9Y6J3 95 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 PINLYPA6NC86 204 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 C2orf70A6NJV1 201 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 TMEM105Q8N8V8 129 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 FAM167A-AS1Q96KT0 104 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 CHCHD7Q9BUK0 85 aa4.68□□□□□ -1.66
VPS13D-201ENST00000011700 HECTD1Q9ULT8 2610 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 MIFP14174 115 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 EPOPA6NHQ4 379 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 IGKV2D-26A0A0A0MRZ7 120 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 A0A1B0GXF2 115 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 C19orf71A6NCJ1 209 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 P0C879 139 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 IGHV7-81A0A0B4J1V7 117 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 CLPSL1A2RUU4 121 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 PLA2G2CQ5R387 149 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 RNF144BQ7Z419 303 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 SHISA2Q6UWI4 295 aa4.67□□□□□ -1.66
VPS13D-201ENST00000011700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.66□□□□□ -1.66
VPS13D-201ENST00000011700 TRAV12-2A0A075B6T6 113 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 TRBV6-4A0A1B0GX49 114 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 FXYD7P58549 80 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 MAST4O15021 2626 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 TRBV27A0A0K0K1C4 114 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 ZFAND2AQ8N6M9 145 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 PTH2Q96A98 100 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 U3KQK5 164 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 HILS1P60008 231 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 Q8N9L7 120 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 FAM110AQ9BQ89 295 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 A6NED7 52 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 MIR7-3HGQ8N6C7 128 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 RNF223E7ERA6 249 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 COX7CP15954 63 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 CENPEQ02224 2701 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 SMIM26A0A096LP01 95 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 G3V318 75 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 IGF1P05019 195 aa4.66□□□□□ -1.66
VPS13D-201ENST00000011700 LYNX1G3V0Z9 82 aa4.65□□□□□ -1.66
VPS13D-201ENST00000011700 LYNX1P0DP58 116 aa4.65□□□□□ -1.66
VPS13D-201ENST00000011700 Q6ZR03 302 aa4.65□□□□□ -1.66
VPS13D-201ENST00000011700 VPREB1P12018 145 aa4.65□□□□□ -1.66
VPS13D-201ENST00000011700 LINC00322Q6ZN03 302 aaPredicted RBP4.65□□□□□ -1.66
VPS13D-201ENST00000011700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-201ENST00000011700 IGHV3-16A0A0C4DH30 117 aa4.65□□□□□ -1.67
VPS13D-201ENST00000011700 IGKV2-29A2NJV5 120 aaPredicted RBP4.65□□□□□ -1.67
VPS13D-201ENST00000011700 FXYD2P54710 66 aa4.65□□□□□ -1.67
VPS13D-201ENST00000011700 PIP4P1Q86T03 277 aa4.65□□□□□ -1.67
VPS13D-201ENST00000011700 NEXN-AS1Q8NBZ9 246 aa4.65□□□□□ -1.67
VPS13D-201ENST00000011700 IGKV1OR2-108A0A075B7D4 117 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 ANKRD39Q53RE8 183 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 DEFB105AQ8NG35 78 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 TRBV6-5A0A0K0K1A5 114 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 Q6JHZ5 121 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 PRORYQ9H606 182 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 LINC00173Q6ZV60 143 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 TRAV7A0A075B6U4 112 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 IGLV1-47P01700 117 aa4.64□□□□□ -1.67
VPS13D-201ENST00000011700 TRAV23DV6A0A075B6W5 121 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 C5orf38Q86SI9 138 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 RPL39LQ96EH5 51 aaKnown RBP4.63□□□□□ -1.67
VPS13D-201ENST00000011700 YPEL4Q96NS1 127 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 ZNRD1Q9P1U0 126 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 CD164L2Q6UWJ8 174 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 IGHV4OR15-8A0A075B7B6 117 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 A0A087WW49 117 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 UBE2D3P61077 147 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 GNRH2O43555 120 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 PLA2G5P39877 138 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 MLST8Q9BVC4 326 aa4.63□□□□□ -1.67
VPS13D-201ENST00000011700 BCE1O60756 84 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 LINC01561Q8N1V8 128 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 ZNF580Q9UK33 172 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 TEX49A0A1B0GTD5 131 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 LST1O00453 97 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 SPRY2O43597 315 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 REG3AQ06141 175 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
VPS13D-201ENST00000011700 A0A0J9YXV3 536 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 WFDC2Q14508 124 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 A0A087WV48 116 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 IGKV3D-7A0A0C4DH55 119 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 LIMD2Q9BT23 127 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 IGHV4-4A0A075B6R2 117 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 LINC00308Q8TCZ7 52 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 FAM215AQ9Y5M1 114 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 RPL37AP8A6NKH3 93 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 CFHR3Q02985 330 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 IGHV3-38A0A0C4DH36 116 aa4.62□□□□□ -1.67
VPS13D-201ENST00000011700 TRBV10-3A0A0K0K1G6 114 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms