RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 FAM231CP0DMU5 169 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 EMP1P54849 157 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 ODF3L2Q3SX64 289 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 AMMECR1LQ6DCA0 310 aa12.4□□□□□ -0.42
PHGDH-229ENST00000641891 SPAG8Q99932 426 aaPredicted RBP12.4□□□□□ -0.42
PHGDH-229ENST00000641891 GCSHP23434 173 aa12.39□□□□□ -0.43
PHGDH-229ENST00000641891 RIPPLY3P57055 190 aa12.39□□□□□ -0.43
PHGDH-229ENST00000641891 NAA38Q9BRA0 125 aaKnown RBP12.39□□□□□ -0.43
PHGDH-229ENST00000641891 A6NDN8 102 aa12.39□□□□□ -0.43
PHGDH-229ENST00000641891 LINC01006Q8NI28 216 aa12.39□□□□□ -0.43
PHGDH-229ENST00000641891 ANK3Q12955 4377 aaKnown RBP12.39□□□□□ -0.43
PHGDH-229ENST00000641891 KMT2BQ9UMN6 2715 aaPredicted RBP12.38□□□□□ -0.43
PHGDH-229ENST00000641891 FXYD2P54710 66 aa12.38□□□□□ -0.43
PHGDH-229ENST00000641891 LINC01587Q99440 93 aa12.38□□□□□ -0.43
PHGDH-229ENST00000641891 IGLV4-69A0A075B6H9 119 aa12.37□□□□□ -0.43
PHGDH-229ENST00000641891 RAB37Q96AX2 223 aa12.37□□□□□ -0.43
PHGDH-229ENST00000641891 H3BRM9 83 aa12.37□□□□□ -0.43
PHGDH-229ENST00000641891 JMJD8Q96S16 334 aa12.37□□□□□ -0.43
PHGDH-229ENST00000641891 OPRPNQ99935 248 aaPredicted RBP12.37□□□□□ -0.43
PHGDH-229ENST00000641891 C11orf86A6NJI1 115 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 M0R2P5 195 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 ZNF415Q09FC8 603 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 CST9LQ9H4G1 147 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 XCL2Q9UBD3 114 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 ACANP16112 2415 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
PHGDH-229ENST00000641891 PMVKQ15126 192 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 NSUN5P1Q3KNT7 163 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 C11orf72Q8NBR9 251 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 OR11H2Q8NH07 326 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 TIMM17AQ99595 171 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 Q9UF83 564 aa12.36□□□□□ -0.43
PHGDH-229ENST00000641891 INSP01308 110 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 UFSP1Q6NVU6 142 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 Q6ZSN1 163 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 OR4C5Q8NGB2 326 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 TMEM141Q96I45 108 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 PRADC1Q9BSG0 188 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 I3L3M4 83 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 RHOHQ15669 191 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 SMR3AQ99954 134 aa12.35□□□□□ -0.43
PHGDH-229ENST00000641891 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
PHGDH-229ENST00000641891 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
PHGDH-229ENST00000641891 ITPR2Q14571 2701 aa12.34□□□□□ -0.43
PHGDH-229ENST00000641891 C9orf118A6NHY6 69 aa12.34□□□□□ -0.43
PHGDH-229ENST00000641891 E9PLD3 99 aa12.34□□□□□ -0.43
PHGDH-229ENST00000641891 H3BUT2 72 aa12.34□□□□□ -0.43
PHGDH-229ENST00000641891 WNK1Q9H4A3 2382 aa12.34□□□□□ -0.43
PHGDH-229ENST00000641891 TRAV25A0A0B4J276 109 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 MYMXA0A1B0GTQ4 84 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 K7ERJ3 54 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 STHQ8IWL8 128 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 CEND1Q8N111 149 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 C16orf95Q9H693 158 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 NACAE9PAV3 2078 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 LINC01549A6NIU2 74 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 AZU1P20160 251 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 CFAP126Q5VTH2 177 aa12.33□□□□□ -0.44
PHGDH-229ENST00000641891 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
PHGDH-229ENST00000641891 A8MWV9 139 aa12.32□□□□□ -0.44
PHGDH-229ENST00000641891 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
PHGDH-229ENST00000641891 ZNRF2Q8NHG8 242 aa12.32□□□□□ -0.44
PHGDH-229ENST00000641891 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
PHGDH-229ENST00000641891 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
PHGDH-229ENST00000641891 C1orf158Q8N1D5 194 aa12.3□□□□□ -0.44
PHGDH-229ENST00000641891 TM2D2Q9BX73 214 aa12.3□□□□□ -0.44
PHGDH-229ENST00000641891 HELZ2Q9BYK8 2649 aaKnown RBP12.3□□□□□ -0.44
PHGDH-229ENST00000641891 SAP30O75446 220 aa12.3□□□□□ -0.44
PHGDH-229ENST00000641891 SMIM13P0DJ93 91 aa12.3□□□□□ -0.44
PHGDH-229ENST00000641891 NHP2Q9NX24 153 aaKnown RBP12.3□□□□□ -0.44
PHGDH-229ENST00000641891 ZNF815PA8K554 130 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 CLUHP3Q96NS8 147 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 HIST1H4GQ99525 98 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 TMEM170BQ5T4T1 132 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 WFDC10AQ9H1F0 79 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 TNFRSF18Q9Y5U5 241 aa12.29□□□□□ -0.44
PHGDH-229ENST00000641891 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 HILS1P60008 231 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 PTH2Q96A98 100 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 IGLV4-3A0A075B6K6 122 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 ADARB2-AS1A8MUL3 147 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 PAPPA-AS1Q5QFB9 102 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 PIK3CD-AS1Q5SR53 167 aa12.28□□□□□ -0.44
PHGDH-229ENST00000641891 ZNF418Q8TF45 676 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-229ENST00000641891 PHLDA1Q8WV24 401 aaPredicted RBP12.28□□□□□ -0.44
PHGDH-229ENST00000641891 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.44
PHGDH-229ENST00000641891 BEAN1Q3B7T3 259 aa12.27□□□□□ -0.45
PHGDH-229ENST00000641891 SPXQ9BT56 116 aa12.27□□□□□ -0.45
PHGDH-229ENST00000641891 MTORP42345 2549 aa12.26□□□□□ -0.45
PHGDH-229ENST00000641891 GAGE10A6NGK3 116 aa12.26□□□□□ -0.45
PHGDH-229ENST00000641891 TAL2Q16559 108 aa12.26□□□□□ -0.45
PHGDH-229ENST00000641891 CEMP1Q6PRD7 247 aaPredicted RBP12.26□□□□□ -0.45
PHGDH-229ENST00000641891 HERVK_113P61574 105 aa12.26□□□□□ -0.45
PHGDH-229ENST00000641891 NIPBLQ6KC79 2804 aaeCLIP12.25□□□□□ -0.45
PHGDH-229ENST00000641891 SETD2Q9BYW2 2564 aaPredicted RBP12.25□□□□□ -0.45
PHGDH-229ENST00000641891 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
PHGDH-229ENST00000641891 A0A1W2PPM0 123 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 135.5 ms