RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 NACAE9PAV3 2078 aa6.62□□□□□ -1.35
PHGDH-228ENST00000641847 F5H697 171 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 HLA-DQA1P01909 254 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 MT-ND6P03923 174 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 ATP5G1P05496 136 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 RAB5AP20339 215 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 LINC00315P59091 139 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 FAM104BQ5XKR9 115 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 Q6ZTC4 211 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 RNF185Q96GF1 192 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 GNB1LQ9BYB4 327 aa6.61□□□□□ -1.35
PHGDH-228ENST00000641847 TRAV26-2A0A0B4J265 109 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 CIDEAO60543 219 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 APCSP02743 223 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 HTN3P15516 51 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 RAB4AP20338 218 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 HOXA5P20719 270 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
PHGDH-228ENST00000641847 SLAQ13239 276 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 MRPL51Q4U2R6 128 aaKnown RBP6.6□□□□□ -1.35
PHGDH-228ENST00000641847 SUMO4Q6EEV6 95 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 FRZBQ92765 325 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 MRPL18Q9H0U6 180 aaKnown RBP6.6□□□□□ -1.35
PHGDH-228ENST00000641847 TRAPPC1Q9Y5R8 145 aa6.6□□□□□ -1.35
PHGDH-228ENST00000641847 F5H768 121 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 SMKR1H3BMG3 65 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 J3QL48 77 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 NCR2O95944 276 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 GATA1P15976 413 aaPredicted RBP6.59□□□□□ -1.35
PHGDH-228ENST00000641847 FHL2Q14192 279 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 Q6ZSN1 163 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 MAPKAPK5-AS1Q8N8E1 139 aa6.59□□□□□ -1.35
PHGDH-228ENST00000641847 DMBT1Q9UGM3 2413 aaPredicted RBP6.58□□□□□ -1.36
PHGDH-228ENST00000641847 TMEM238LA0A1B0GVL6 79 aa6.58□□□□□ -1.36
PHGDH-228ENST00000641847 IGLL5B9A064 214 aa6.58□□□□□ -1.36
PHGDH-228ENST00000641847 K7EQD1 137 aa6.58□□□□□ -1.36
PHGDH-228ENST00000641847 FABP9Q0Z7S8 132 aa6.58□□□□□ -1.36
PHGDH-228ENST00000641847 MRAP2Q96G30 205 aa6.58□□□□□ -1.36
PHGDH-228ENST00000641847 DEFB131BA0A096LNP1 70 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 TRAV10A0A0B4J240 114 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 D6R8Y8 96 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 H7C1H1 209 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 M0QY20 66 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 GAS8-AS1O95177 125 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 P0DMU3 169 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 FAM231AP0DMU4 169 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 FAM231CP0DMU5 169 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 CKS2P33552 79 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 RHOHQ15669 191 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 KIAA1644Q3SXP7 199 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 ORMDL3Q8N138 153 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
PHGDH-228ENST00000641847 RPL39LQ96EH5 51 aaKnown RBP6.57□□□□□ -1.36
PHGDH-228ENST00000641847 TRAV26-1A0A087WT03 109 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 A0A0J9YY99 117 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 TRBV6-4A0A1B0GX49 114 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 CDK2AP2O75956 126 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 PPBPP02775 128 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 TRGC2P03986 189 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 CRYBA4P53673 196 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 OR10J3Q5JRS4 329 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 NRACQ8N912 160 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 PRELID3AQ96N28 172 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 PRADC1Q9BSG0 188 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 PRO0255Q9UI72 69 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 HHLA3Q9XRX5 114 aa6.56□□□□□ -1.36
PHGDH-228ENST00000641847 SRRM2Q9UQ35 2752 aaKnown RBP6.55□□□□□ -1.36
PHGDH-228ENST00000641847 TRBV10-1A0A0K0K1A3 114 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 LOC100131303A0A0U1RQF7 123 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 PAX4O43316 350 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 SRIP30626 198 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 LINC00528Q8N1L1 170 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 VSIG2Q96IQ7 327 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
PHGDH-228ENST00000641847 GAGE12JA6NER3 117 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 PHOX2AO14813 284 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 TNFRSF6BO95407 300 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 NPYP01303 97 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 GYPEP15421 78 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 RPL36AP83881 106 aaKnown RBP6.54□□□□□ -1.36
PHGDH-228ENST00000641847 GAGE1Q13065 139 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 GAGE4Q13068 117 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 GAGE5Q13069 117 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 GAGE13Q4V321 117 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 NEXN-AS1Q8NBZ9 246 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 RPL36ALQ969Q0 106 aaKnown RBP6.54□□□□□ -1.36
PHGDH-228ENST00000641847 DNAJC30Q96LL9 226 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 ALKBH7Q9BT30 221 aaPredicted RBP6.54□□□□□ -1.36
PHGDH-228ENST00000641847 NIT2Q9NQR4 276 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 Q9UF83 564 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 LAMTOR2Q9Y2Q5 125 aa6.54□□□□□ -1.36
PHGDH-228ENST00000641847 TRBV6-5A0A0K0K1A5 114 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 M0R2N4 97 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 RTL8CO15255 209 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 PPP1R17O96001 155 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 LINC00694P0DN24 101 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 ST20Q9HBF5 79 aa6.53□□□□□ -1.36
PHGDH-228ENST00000641847 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms