RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 LAMTOR3Q9UHA4 124 aa10.96□□□□□ -0.65
SCARB2-216ENST00000639300 EBI3Q14213 229 aa10.96□□□□□ -0.65
SCARB2-216ENST00000639300 PPDPFLQ8WWR9 84 aa10.96□□□□□ -0.65
SCARB2-216ENST00000639300 Q9H8V8 135 aa10.96□□□□□ -0.65
SCARB2-216ENST00000639300 A0A0J9YX75 114 aa10.96□□□□□ -0.66
SCARB2-216ENST00000639300 A0A0J9YY99 117 aa10.96□□□□□ -0.66
SCARB2-216ENST00000639300 C11orf86A6NJI1 115 aa10.96□□□□□ -0.66
SCARB2-216ENST00000639300 BAALCQ8WXS3 180 aa10.96□□□□□ -0.66
SCARB2-216ENST00000639300 SMAD5-AS1Q9Y6J3 95 aa10.96□□□□□ -0.66
SCARB2-216ENST00000639300 TEX48A0A1B0GUV7 120 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 HERVK_113P63121 156 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 C11orf71Q6IPW1 123 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 ZFAND3Q9H8U3 227 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 IGLV2-11P01706 119 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 CFC1BP0CG36 223 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 CFC1P0CG37 223 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 C5orf38Q86SI9 138 aa10.95□□□□□ -0.66
SCARB2-216ENST00000639300 A4D1N5 150 aa10.94□□□□□ -0.66
SCARB2-216ENST00000639300 FSTL3O95633 263 aa10.94□□□□□ -0.66
SCARB2-216ENST00000639300 C10orf99Q6UWK7 81 aa10.94□□□□□ -0.66
SCARB2-216ENST00000639300 CPAMD8Q8IZJ3 1885 aa10.94□□□□□ -0.66
SCARB2-216ENST00000639300 TNFRSF13BO14836 293 aaPredicted RBP10.94□□□□□ -0.66
SCARB2-216ENST00000639300 ANGP03950 147 aaKnown RBP10.94□□□□□ -0.66
SCARB2-216ENST00000639300 XIRP2A4UGR9 3374 aa10.94□□□□□ -0.66
SCARB2-216ENST00000639300 XCL1P47992 114 aa10.94□□□□□ -0.66
SCARB2-216ENST00000639300 HIST1H4AP62805 103 aaKnown RBP10.93□□□□□ -0.66
SCARB2-216ENST00000639300 SPATA12Q7Z6I5 190 aa10.93□□□□□ -0.66
SCARB2-216ENST00000639300 H3BMM0 161 aa10.93□□□□□ -0.66
SCARB2-216ENST00000639300 UBE2WQ96B02 151 aa10.93□□□□□ -0.66
SCARB2-216ENST00000639300 C20orf173Q96LM9 149 aa10.93□□□□□ -0.66
SCARB2-216ENST00000639300 ESM1Q9NQ30 184 aa10.93□□□□□ -0.66
SCARB2-216ENST00000639300 WFDC2Q14508 124 aa10.93□□□□□ -0.66
SCARB2-216ENST00000639300 NTN5Q8WTR8 489 aaPredicted RBP10.93□□□□□ -0.66
SCARB2-216ENST00000639300 GAGE12HA6NDE8 117 aa10.92□□□□□ -0.66
SCARB2-216ENST00000639300 TRIOO75962 3097 aa10.92□□□□□ -0.66
SCARB2-216ENST00000639300 TOMM6Q96B49 74 aa10.92□□□□□ -0.66
SCARB2-216ENST00000639300 IGHG4P01861 327 aa10.92□□□□□ -0.66
SCARB2-216ENST00000639300 CEMP1Q6PRD7 247 aaPredicted RBP10.92□□□□□ -0.66
SCARB2-216ENST00000639300 DAND5Q8N907 189 aa10.92□□□□□ -0.66
SCARB2-216ENST00000639300 MUSTN1Q8IVN3 82 aa10.91□□□□□ -0.66
SCARB2-216ENST00000639300 SPANXA1Q9NS26 97 aa10.91□□□□□ -0.66
SCARB2-216ENST00000639300 EXPH5Q8NEV8 1989 aa10.91□□□□□ -0.66
SCARB2-216ENST00000639300 GHRHP01286 108 aa10.91□□□□□ -0.66
SCARB2-216ENST00000639300 E9PLD3 99 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 P0DMU3 169 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 FAM231AP0DMU4 169 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 FAM231CP0DMU5 169 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 HIST2H2BDQ6DRA6 164 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 CARD19Q96LW7 228 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 PRORYQ9H606 182 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 TRAV12-1A0A0B4J245 112 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 Q6ZQT7 251 aa10.9□□□□□ -0.66
SCARB2-216ENST00000639300 CITED2Q99967 270 aaPredicted RBP10.9□□□□□ -0.67
SCARB2-216ENST00000639300 HIGD1BQ9P298 99 aa10.89□□□□□ -0.67
SCARB2-216ENST00000639300 ZFAND2AQ8N6M9 145 aa10.89□□□□□ -0.67
SCARB2-216ENST00000639300 LINC00310P59036 64 aa10.89□□□□□ -0.67
SCARB2-216ENST00000639300 MED14OSP0DP75 135 aa10.89□□□□□ -0.67
SCARB2-216ENST00000639300 Q6ZS46 218 aa10.89□□□□□ -0.67
SCARB2-216ENST00000639300 TIMM17AQ99595 171 aa10.89□□□□□ -0.67
SCARB2-216ENST00000639300 CFAP54Q96N23 3096 aa10.88□□□□□ -0.67
SCARB2-216ENST00000639300 C20orf203Q8NBC4 194 aa10.88□□□□□ -0.67
SCARB2-216ENST00000639300 ZNF561-AS1K7EIQ3 104 aa10.88□□□□□ -0.67
SCARB2-216ENST00000639300 Q8N6K4 173 aa10.88□□□□□ -0.67
SCARB2-216ENST00000639300 IGLV10-54A0A075B6I4 117 aa10.87□□□□□ -0.67
SCARB2-216ENST00000639300 APOC4P55056 127 aa10.87□□□□□ -0.67
SCARB2-216ENST00000639300 C11orf21Q9P2W6 132 aa10.87□□□□□ -0.67
SCARB2-216ENST00000639300 GAS8-AS1O95177 125 aa10.87□□□□□ -0.67
SCARB2-216ENST00000639300 IGKV2D-26A0A0A0MRZ7 120 aa10.87□□□□□ -0.67
SCARB2-216ENST00000639300 K7EQG2 157 aa10.87□□□□□ -0.67
SCARB2-216ENST00000639300 GYPEP15421 78 aa10.86□□□□□ -0.67
SCARB2-216ENST00000639300 TRBV7-3A0A075B6L6 115 aa10.86□□□□□ -0.67
SCARB2-216ENST00000639300 TMEM89A2RUT3 159 aa10.86□□□□□ -0.67
SCARB2-216ENST00000639300 DEFB4AO15263 64 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 RNF185Q96GF1 192 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 RNF152Q8N8N0 203 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 PIFOQ8TCI5 191 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 BPTFQ12830 3046 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 A0A1W2PPR1 153 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 K7EQD1 137 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 SLC25A29Q8N8R3 303 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 DNAJC30Q96LL9 226 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 OVOL2Q9BRP0 275 aa10.85□□□□□ -0.67
SCARB2-216ENST00000639300 WFDC11Q8NEX6 87 aa10.84□□□□□ -0.67
SCARB2-216ENST00000639300 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
SCARB2-216ENST00000639300 UBE2DNLQ8IWF7 75 aa10.84□□□□□ -0.67
SCARB2-216ENST00000639300 ATP6V0E2Q8NHE4 81 aa10.84□□□□□ -0.67
SCARB2-216ENST00000639300 COL5A1P20908 1838 aaPredicted RBP10.83□□□□□ -0.68
SCARB2-216ENST00000639300 CDH23Q9H251 3354 aa10.83□□□□□ -0.68
SCARB2-216ENST00000639300 INAFM2P0DMQ5 153 aa10.83□□□□□ -0.68
SCARB2-216ENST00000639300 PRR9Q5T870 116 aa10.83□□□□□ -0.68
SCARB2-216ENST00000639300 HIST2H2BCQ6DN03 193 aa10.83□□□□□ -0.68
SCARB2-216ENST00000639300 TRAV13-2A0A0B4J235 113 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 FLNBO75369 2602 aaKnown RBP10.82□□□□□ -0.68
SCARB2-216ENST00000639300 RS1O15537 224 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 PTH2Q96A98 100 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 C16orf74Q96GX8 76 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 TINCRA0A1B0GVN0 87 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 DNAJC9-AS1A6NH13 148 aa10.82□□□□□ -0.68
SCARB2-216ENST00000639300 SOCS3O14543 225 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 150.5 ms