RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.82□□□□□ -1.16
TARDBP-230ENST00000639083 SCGB3A1Q96QR1 104 aa7.82□□□□□ -1.16
TARDBP-230ENST00000639083 MRPL16Q9NX20 251 aaKnown RBP7.82□□□□□ -1.16
TARDBP-230ENST00000639083 ZMAT5Q9UDW3 170 aaKnown RBP7.82□□□□□ -1.16
TARDBP-230ENST00000639083 TRBV27A0A0K0K1C4 114 aa7.82□□□□□ -1.16
TARDBP-230ENST00000639083 A8MWV9 139 aa7.82□□□□□ -1.16
TARDBP-230ENST00000639083 KIR2DL4Q99706 377 aa7.82□□□□□ -1.16
TARDBP-230ENST00000639083 SPXQ9BT56 116 aa7.82□□□□□ -1.16
TARDBP-230ENST00000639083 ATRQ13535 2644 aa7.82□□□□□ -1.16
TARDBP-230ENST00000639083 F8P00451 2351 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 P0DMU3 169 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 FAM231AP0DMU4 169 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 FAM231CP0DMU5 169 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 ANKRD39Q53RE8 183 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 PIK3CD-AS1Q5SR53 167 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 CFAP126Q5VTH2 177 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 UFSP1Q6NVU6 142 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 ZFP2Q6ZN57 461 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 PTH2Q96A98 100 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 ZMAT4Q9H898 229 aa7.81□□□□□ -1.16
TARDBP-230ENST00000639083 LBHQ53QV2 105 aaPredicted RBP7.8□□□□□ -1.16
TARDBP-230ENST00000639083 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 Q6ZSN1 163 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 RNASE8Q8TDE3 154 aaKnown RBP7.8□□□□□ -1.16
TARDBP-230ENST00000639083 MRPL35Q9NZE8 188 aaKnown RBP7.8□□□□□ -1.16
TARDBP-230ENST00000639083 Q9UF83 564 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 HHLA3Q9XRX5 114 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 TEP1Q99973 2627 aaKnown RBP7.8□□□□□ -1.16
TARDBP-230ENST00000639083 IGKCP01834 107 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 G0S2P27469 103 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 ERASQ7Z444 233 aa7.8□□□□□ -1.16
TARDBP-230ENST00000639083 MRPS16Q9Y3D3 137 aaKnown RBP7.8□□□□□ -1.16
TARDBP-230ENST00000639083 A0A087WX48 190 aa7.79□□□□□ -1.16
TARDBP-230ENST00000639083 H7C1H1 209 aa7.79□□□□□ -1.16
TARDBP-230ENST00000639083 RPL39P62891 51 aaKnown RBP7.79□□□□□ -1.16
TARDBP-230ENST00000639083 CITED1Q99966 193 aa7.79□□□□□ -1.16
TARDBP-230ENST00000639083 CYSLTR1Q9Y271 337 aa7.79□□□□□ -1.16
TARDBP-230ENST00000639083 TP53TG1Q9Y2A0 90 aa7.79□□□□□ -1.16
TARDBP-230ENST00000639083 TRRAPQ9Y4A5 3859 aa7.79□□□□□ -1.16
TARDBP-230ENST00000639083 DPM2O94777 84 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 COX8AP10176 69 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 MRPL52Q86TS9 123 aaKnown RBP7.78□□□□□ -1.16
TARDBP-230ENST00000639083 TRGV1A0A0A0MS02 117 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 NEXN-AS1Q8NBZ9 246 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 CSNK1G2-AS1Q8NCQ2 148 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 IL17DQ8TAD2 202 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 TMEM263Q8WUH6 116 aaKnown RBP7.78□□□□□ -1.16
TARDBP-230ENST00000639083 BAALCQ8WXS3 180 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 EDA2RQ9HAV5 297 aa7.78□□□□□ -1.16
TARDBP-230ENST00000639083 TRAV12-1A0A0B4J245 112 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 I3L3M4 83 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 RS1O15537 224 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 TSHBP01222 138 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 INSL3P51460 131 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 Q6ZVH6 145 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 C1QTNF4Q9BXJ3 329 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 IGIPA6NJ69 53 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 HINT1P49773 126 aaPredicted RBP7.77□□□□□ -1.17
TARDBP-230ENST00000639083 RIPPLY3P57055 190 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 C9orf66Q5T8R8 295 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 Q6ZTI0 123 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 NOP10Q9NPE3 64 aaKnown RBP7.77□□□□□ -1.17
TARDBP-230ENST00000639083 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 NACAE9PAV3 2078 aa7.77□□□□□ -1.17
TARDBP-230ENST00000639083 PRSS29PA6NIE9 313 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 RHODO00212 210 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 NMUP48645 174 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 ZC2HC1BQ5TFG8 222 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 GTSCR1Q86UQ5 136 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 CHTOPQ9Y3Y2 248 aaKnown RBP7.76□□□□□ -1.17
TARDBP-230ENST00000639083 IGKV2D-26A0A0A0MRZ7 120 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 F8VRH5 84 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 IGHV3-53P01767 116 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 FGF6P10767 208 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 PCP2Q8IVA1 136 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 OR4C5Q8NGB2 326 aa7.76□□□□□ -1.17
TARDBP-230ENST00000639083 PLAC8L1A1L4L8 177 aa7.75□□□□□ -1.17
TARDBP-230ENST00000639083 LINC01549A6NIU2 74 aa7.75□□□□□ -1.17
TARDBP-230ENST00000639083 RHOHQ15669 191 aa7.75□□□□□ -1.17
TARDBP-230ENST00000639083 ZNF479Q96JC4 524 aa7.75□□□□□ -1.17
TARDBP-230ENST00000639083 PLNP26678 52 aa7.75□□□□□ -1.17
TARDBP-230ENST00000639083 BOD1L2Q8IYS8 172 aa7.75□□□□□ -1.17
TARDBP-230ENST00000639083 DAZ2Q13117 558 aaKnown RBP7.74□□□□□ -1.17
TARDBP-230ENST00000639083 RRN3P1Q2M238 152 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 MPV17L2Q567V2 206 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 C2orf91Q6ZV80 131 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 C20orf203Q8NBC4 194 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 C16orf74Q96GX8 76 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 TIMM17AQ99595 171 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 NBEAL2Q6ZNJ1 2754 aa7.74□□□□□ -1.17
TARDBP-230ENST00000639083 ZNF25P17030 456 aaPredicted RBP7.73□□□□□ -1.17
TARDBP-230ENST00000639083 TMEM141Q96I45 108 aa7.73□□□□□ -1.17
TARDBP-230ENST00000639083 OPRPNQ99935 248 aaPredicted RBP7.73□□□□□ -1.17
TARDBP-230ENST00000639083 TTTY13Q9BZ97 58 aa7.73□□□□□ -1.17
TARDBP-230ENST00000639083 CST9LQ9H4G1 147 aa7.73□□□□□ -1.17
TARDBP-230ENST00000639083 IGHV3-38A0A0C4DH36 116 aa7.72□□□□□ -1.17
TARDBP-230ENST00000639083 GAGE12BA1L429 117 aa7.72□□□□□ -1.17
TARDBP-230ENST00000639083 GAGE7O76087 117 aa7.72□□□□□ -1.17
TARDBP-230ENST00000639083 GAGE12FP0CL80 117 aa7.72□□□□□ -1.17
TARDBP-230ENST00000639083 GAGE12GP0CL81 117 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms