RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 GUCA1BQ9UMX6 200 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 LRRC37A2A6NM11 1700 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 UHRF1BP1Q6BDS2 1440 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 ANKRD50Q9ULJ7 1429 aa-3.87□□□□□ -3.03
LMBR1-222ENST00000638959 TRAV2A0A0B4J234 112 aa-3.88□□□□□ -3.03
LMBR1-222ENST00000638959 H3BQV1 296 aa-3.88□□□□□ -3.03
LMBR1-222ENST00000638959 NDUFC2O95298 119 aa-3.88□□□□□ -3.03
LMBR1-222ENST00000638959 TRAPPC8Q9Y2L5 1435 aa-3.88□□□□□ -3.03
LMBR1-222ENST00000638959 FER1L6Q2WGJ9 1857 aa-3.89□□□□□ -3.03
LMBR1-222ENST00000638959 PTPRMP28827 1452 aa-3.89□□□□□ -3.03
LMBR1-222ENST00000638959 RIIAD1A6NNX1 92 aa-3.89□□□□□ -3.03
LMBR1-222ENST00000638959 AIPO00170 330 aa-3.9□□□□□ -3.03
LMBR1-222ENST00000638959 APOA2P02652 100 aa-3.9□□□□□ -3.03
LMBR1-222ENST00000638959 RPL19P84098 196 aaKnown RBP-3.9□□□□□ -3.03
LMBR1-222ENST00000638959 STX19Q8N4C7 294 aa-3.9□□□□□ -3.03
LMBR1-222ENST00000638959 OTORQ9NRC9 128 aa-3.9□□□□□ -3.03
LMBR1-222ENST00000638959 NBEAL2Q6ZNJ1 2754 aa-3.91□□□□□ -3.03
LMBR1-222ENST00000638959 CCDC171Q6TFL3 1326 aa-3.91□□□□□ -3.03
LMBR1-222ENST00000638959 TCOF1Q13428 1488 aaKnown RBP-3.91□□□□□ -3.03
LMBR1-222ENST00000638959 WDR97A6NE52 1622 aa-3.91□□□□□ -3.03
LMBR1-222ENST00000638959 DNAH8Q96JB1 4490 aa-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 LSM3P62310 102 aaKnown RBP-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 CROCCP2Q86T23 111 aa-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 FAM9CQ8IZT9 166 aa-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 PAIP2Q9BPZ3 127 aaKnown RBP-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 CHMP4BQ9H444 224 aaKnown RBP-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 CEP295Q9C0D2 2601 aa-3.91□□□□□ -3.04
LMBR1-222ENST00000638959 POLA1P09884 1462 aaPredicted RBP-3.92□□□□□ -3.04
LMBR1-222ENST00000638959 MRC1P22897 1456 aa-3.92□□□□□ -3.04
LMBR1-222ENST00000638959 IQCF5A8MTL0 148 aa-3.92□□□□□ -3.04
LMBR1-222ENST00000638959 ALX1Q15699 326 aa-3.92□□□□□ -3.04
LMBR1-222ENST00000638959 TMEM97Q5BJF2 176 aa-3.92□□□□□ -3.04
LMBR1-222ENST00000638959 SRCAPQ6ZRS2 3230 aa-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 HMGXB3Q12766 1538 aa-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 TRBV27A0A0K0K1C4 114 aa-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 PGRMC1O00264 195 aaKnown RBP-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 PCBD1P61457 104 aa-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 MRPS15P82914 257 aaKnown RBP-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 BORCS8Q96FH0 119 aa-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 USMG5Q96IX5 58 aa-3.93□□□□□ -3.04
LMBR1-222ENST00000638959 FMN2Q9NZ56 1722 aa-3.94□□□□□ -3.04
LMBR1-222ENST00000638959 CLPSL1A2RUU4 121 aa-3.94□□□□□ -3.04
LMBR1-222ENST00000638959 S100A9P06702 114 aaKnown RBP-3.94□□□□□ -3.04
LMBR1-222ENST00000638959 DYNLRB2Q8TF09 96 aa-3.94□□□□□ -3.04
LMBR1-222ENST00000638959 TRANK1O15050 2925 aa-3.94□□□□□ -3.04
LMBR1-222ENST00000638959 FAM186AA6NE01 2351 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 KIAA0556O60303 1618 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 PNMA8CA0A1B0GUJ8 204 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 PPP5D1E7EU14 171 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 YKT6O15498 198 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 CYBAP13498 195 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 UBE2D3P61077 147 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 UBE2D2P62837 147 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 PLGLB1Q02325 96 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 C9orf116Q5BN46 136 aaPredicted RBP-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 PAPPA2Q9BXP8 1791 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 CCDC144AA2RUR9 1427 aa-3.95□□□□□ -3.04
LMBR1-222ENST00000638959 C5orf42Q9H799 3197 aa-3.96□□□□□ -3.04
LMBR1-222ENST00000638959 TMEM114B3SHH9 223 aa-3.96□□□□□ -3.04
LMBR1-222ENST00000638959 TMEM170BQ5T4T1 132 aa-3.96□□□□□ -3.04
LMBR1-222ENST00000638959 CNPY4Q8N129 248 aa-3.96□□□□□ -3.04
LMBR1-222ENST00000638959 CSMD1Q96PZ7 3565 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 EYSQ5T1H1 3165 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 MAGI1Q96QZ7 1491 aaPredicted RBP-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 TRBV7-4A0A0J9YYF1 115 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 CTXND1A0A1B0GTU2 59 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 ERICH2A1L162 156 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 CCDC179H3BU77 68 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 HBDP02042 147 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 PIPP12273 146 aaPredicted RBP-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 SDC2P34741 201 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 CRYBA4P53673 196 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 HSPE1P61604 102 aaKnown RBP-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 GNG5P63218 68 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 VSTM2AQ8TAG5 236 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 BTF3L4Q96K17 158 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 CARD19Q96LW7 228 aa-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 NMNAT1Q9HAN9 279 aaPredicted RBP-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 FAM32AQ9Y421 112 aaKnown RBP-3.97□□□□□ -3.04
LMBR1-222ENST00000638959 TRAV13-1A0A0B4J241 112 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 F8VRH5 84 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 H7C1C5 153 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 M0R135 149 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 CRYGSP22914 178 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 LCN6P62502 163 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 TMED2Q15363 201 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 LINC00305Q7Z4B0 112 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 NUP35Q8NFH5 326 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 CTNNBIP1Q9NSA3 81 aaPredicted RBP-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 UFC1Q9Y3C8 167 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 REV3LO60673 3130 aa-3.98□□□□□ -3.05
LMBR1-222ENST00000638959 ZNF236Q9UL36 1845 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 G3V2T6 193 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 H3BMG7 143 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 S100A6P06703 90 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 PPP1R2P41236 205 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 SRP9P49458 86 aaKnown RBP-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 CCL18P55774 89 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 PHB2Q99623 299 aa-3.99□□□□□ -3.05
LMBR1-222ENST00000638959 PIRTP0C851 137 aa-4□□□□□ -3.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms