RNA–Protein interactions for RNA: ENST00000638299.1

HMHB1-202, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMHB1, Length 126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-202ENST00000638299 INE1O15225 51 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 SSSCA1O60232 199 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 GNG11P61952 73 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 CCL8P80075 99 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 Q0VG73 95 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 PYY3Q5JQD4 70 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 OBSCN-AS1Q96MR7 158 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 CYSTM1Q9H1C7 97 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 NPVFQ9HCQ7 196 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 SCP2D1Q9UJQ7 156 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 AP4S1Q9Y587 144 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 GAPVD1Q14C86 1478 aa1.17□□□□□ -2.22
HMHB1-202ENST00000638299 NSD3Q9BZ95 1437 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 MED12Q93074 2177 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 MARF1Q9Y4F3 1742 aaKnown RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 IGKV3D-7A0A0C4DH55 119 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 IGKV3OR2-268A0A0C4DH90 116 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 IGKV2-29A2NJV5 120 aaPredicted RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 SIX6O95475 246 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 KRTAP10-10P60014 251 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 PCOTHQ58A44 107 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 CYP2G1PQ6ZSU1 146 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 C20orf197Q8N268 126 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 AMELYQ99218 206 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 ADGRB2O60241 1585 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 COL4A4P53420 1690 aaPredicted RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 RGPD3A6NKT7 1758 aaPredicted RBP1.16□□□□□ -2.22
HMHB1-202ENST00000638299 DOCK11Q5JSL3 2073 aa1.16□□□□□ -2.22
HMHB1-202ENST00000638299 TOP2BQ02880 1626 aa1.15□□□□□ -2.22
HMHB1-202ENST00000638299 COL5A1P20908 1838 aaPredicted RBP1.15□□□□□ -2.22
HMHB1-202ENST00000638299 LOC110117498A0A087WWA1 95 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 PIGBOS1A0A0B4J2F0 54 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 H3BQ15 152 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 M0R2N4 97 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 MRPS14O60783 128 aaKnown RBP1.15□□□□□ -2.23
HMHB1-202ENST00000638299 LINC00032P0C843 101 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 FXYD4P59646 89 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP12-1P59990 96 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 FXYD3Q14802 87 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 C10orf128Q5T292 105 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 NDUFA11Q86Y39 141 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 CCDC18Q5T9S5 1454 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 PPIP5K1Q6PFW1 1433 aa1.15□□□□□ -2.23
HMHB1-202ENST00000638299 MED13Q9UHV7 2174 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 ARHGAP35Q9NRY4 1499 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 TRBV6-7A0A0A0MS04 114 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 TRBV7-1A0A0A6YYK4 115 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 CRYM-AS1A6NIL9 109 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 HIGD1CA8MV81 97 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 CCL3L1P16619 93 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 SEC11AP67812 179 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP6-3Q3LI67 103 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 SPATA45Q537H7 98 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP5-3Q6L8H2 238 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 SFTA2Q6UW10 78 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF818PQ6ZRF7 136 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 C5orf56Q8N8D9 126 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 MYOZ3Q8TDC0 251 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 LINC00208Q96KT6 92 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 CYP4F30PQ9H0H9 118 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 ABCA4P78363 2273 aa1.14□□□□□ -2.23
HMHB1-202ENST00000638299 PRDM15P57071 1507 aaPredicted RBP1.14□□□□□ -2.23
HMHB1-202ENST00000638299 COL4A6Q14031 1691 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 ARHGEF5Q12774 1597 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 TRBV7-3A0A075B6L6 115 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 IGLV3-32A0A0A0MS00 114 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 FAUP35544 74 aaKnown RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 KRTAP1-1Q07627 177 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 GDF5OSQ5U4N7 250 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 Q5VV11 94 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 C20orf78Q9BR46 151 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 MANBALQ9NQG1 85 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 KIAA0100Q14667 2235 aaKnown RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 CDK13Q14004 1512 aaKnown RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 SIPA1L3O60292 1781 aaPredicted RBP1.13□□□□□ -2.23
HMHB1-202ENST00000638299 SCN7AQ01118 1682 aa1.13□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF236Q9UL36 1845 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 UBR1Q8IWV7 1749 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 PRRC2BQ5JSZ5 2229 aaKnown RBP1.12□□□□□ -2.23
HMHB1-202ENST00000638299 KDM6BO15054 1643 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 PDCD11Q14690 1871 aaKnown RBP1.12□□□□□ -2.23
HMHB1-202ENST00000638299 PPLO60437 1756 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 A0A087WTM6 91 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 NAP1L6A6NFF2 107 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 FXYD1O00168 92 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 APOC3P02656 99 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 NMBP08949 121 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 SSBP1Q04837 148 aaKnown RBP1.12□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF56Q15929 161 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 DEFB132Q7Z7B7 95 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 ZNF563Q8TA94 476 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 COX7B2Q8TF08 81 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 BPESC1Q9GZL8 116 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 SNURFQ9Y675 71 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 COL4A1P02462 1669 aa1.12□□□□□ -2.23
HMHB1-202ENST00000638299 ABCC3O15438 1527 aa1.11□□□□□ -2.23
HMHB1-202ENST00000638299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.11□□□□□ -2.23
HMHB1-202ENST00000638299 TRAV22A0A0B4J277 110 aa1.11□□□□□ -2.23
HMHB1-202ENST00000638299 H3BQF6 201 aa1.11□□□□□ -2.23
HMHB1-202ENST00000638299 CHKB-CPT1BH3BT56 60 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms