RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 CELSR1Q9NYQ6 3014 aa14.89□□□□□ -0.03
SYNGAP1-227ENST00000638142 TCL1BO95988 128 aa14.89□□□□□ -0.03
SYNGAP1-227ENST00000638142 CRYBA4P53673 196 aa14.89□□□□□ -0.03
SYNGAP1-227ENST00000638142 LEPROTO15243 131 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 CARD19Q96LW7 228 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 TMEM223A0PJW6 202 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 P0DMU3 169 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 FAM231AP0DMU4 169 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 FAM231CP0DMU5 169 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 C20orf203Q8NBC4 194 aa14.88□□□□□ -0.03
SYNGAP1-227ENST00000638142 I3L3M4 83 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 GATA3P23771 443 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 FHL3Q13643 280 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 SPINK13Q1W4C9 94 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 PTH2Q96A98 100 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 SPINK8P0C7L1 97 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 PRO1854Q9UHT4 67 aa14.87□□□□□ -0.03
SYNGAP1-227ENST00000638142 RNF152Q8N8N0 203 aa14.86□□□□□ -0.03
SYNGAP1-227ENST00000638142 OPRPNQ99935 248 aaPredicted RBP14.86□□□□□ -0.03
SYNGAP1-227ENST00000638142 PKD1L2Q7Z442 2459 aa14.86□□□□□ -0.03
SYNGAP1-227ENST00000638142 A8MWV9 139 aa14.86□□□□□ -0.03
SYNGAP1-227ENST00000638142 Q6ZUT4 128 aa14.86□□□□□ -0.03
SYNGAP1-227ENST00000638142 TRGV11A0A075B6L2 103 aa14.85□□□□□ -0.03
SYNGAP1-227ENST00000638142 IGHV4-59P01825 116 aa14.85□□□□□ -0.03
SYNGAP1-227ENST00000638142 C10orf99Q6UWK7 81 aa14.85□□□□□ -0.03
SYNGAP1-227ENST00000638142 VPS13CQ709C8 3753 aa14.84□□□□□ -0.03
SYNGAP1-227ENST00000638142 ZNF22P17026 224 aaPredicted RBP14.84□□□□□ -0.03
SYNGAP1-227ENST00000638142 ITPR1Q14643 2758 aa14.84□□□□□ -0.03
SYNGAP1-227ENST00000638142 RHODO00212 210 aa14.84□□□□□ -0.03
SYNGAP1-227ENST00000638142 MT-ATP8P03928 68 aa14.84□□□□□ -0.03
SYNGAP1-227ENST00000638142 XGP55808 180 aa14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 DEFB112Q30KQ8 113 aa14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 GEMIN7Q9H840 131 aaKnown RBP14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 ZFYVE26Q68DK2 2539 aa14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 IGLV4-3A0A075B6K6 122 aa14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 SYNJ2BPP57105 145 aa14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 EDA2RQ9HAV5 297 aa14.83□□□□□ -0.04
SYNGAP1-227ENST00000638142 M0QXV9 152 aa14.81□□□□□ -0.04
SYNGAP1-227ENST00000638142 SCGB1C2P0DMR2 95 aa14.81□□□□□ -0.04
SYNGAP1-227ENST00000638142 A4D1N5 150 aa14.81□□□□□ -0.04
SYNGAP1-227ENST00000638142 PYGO1Q9Y3Y4 419 aa14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 CHD6Q8TD26 2715 aa14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 A0A0B4J2C4 111 aa14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 A0A0J9YXV3 536 aa14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 DSCR9P59020 149 aa14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 ANKRD29Q8N6D5 301 aa14.8□□□□□ -0.04
SYNGAP1-227ENST00000638142 KMT2BQ9UMN6 2715 aaPredicted RBP14.79□□□□□ -0.04
SYNGAP1-227ENST00000638142 IGHV3-33P01772 117 aa14.78□□□□□ -0.04
SYNGAP1-227ENST00000638142 TMEM263Q8WUH6 116 aaKnown RBP14.78□□□□□ -0.04
SYNGAP1-227ENST00000638142 TRAV2A0A0B4J234 112 aa14.77□□□□□ -0.04
SYNGAP1-227ENST00000638142 TMEM262E9PQX1 116 aa14.77□□□□□ -0.04
SYNGAP1-227ENST00000638142 ELANEP08246 267 aa14.77□□□□□ -0.04
SYNGAP1-227ENST00000638142 IGHV3-64A0A075B6Q5 118 aa14.77□□□□□ -0.05
SYNGAP1-227ENST00000638142 TRAV26-1A0A087WT03 109 aa14.77□□□□□ -0.05
SYNGAP1-227ENST00000638142 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 HOXD3P31249 432 aaPredicted RBP14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 LINC01356Q8N9X3 169 aa14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 M0R2P5 195 aa14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 EIF4EBP3O60516 100 aaPredicted RBP14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 MUSTN1Q8IVN3 82 aa14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 ERG28Q9UKR5 140 aa14.76□□□□□ -0.05
SYNGAP1-227ENST00000638142 SLC25A20O43772 301 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 TGFAP01135 160 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 CD28P10747 220 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 UBE2E2Q96LR5 201 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 CLUHP3Q96NS8 147 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 RBMY1A1P0DJD3 496 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 RBMY1CP0DJD4 496 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 MRPS36P82909 103 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 RBMY1FQ15415 496 aaKnown RBP14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 RAX2Q96IS3 184 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 DUX5Q96PT3 197 aa14.75□□□□□ -0.05
SYNGAP1-227ENST00000638142 A0A0J9YXY3 114 aa14.74□□□□□ -0.05
SYNGAP1-227ENST00000638142 CSPG4Q6UVK1 2322 aa14.74□□□□□ -0.05
SYNGAP1-227ENST00000638142 J3QLI3 93 aa14.74□□□□□ -0.05
SYNGAP1-227ENST00000638142 IGHV3-30-3P0DP02 117 aa14.74□□□□□ -0.05
SYNGAP1-227ENST00000638142 TIMM21Q9BVV7 248 aa14.74□□□□□ -0.05
SYNGAP1-227ENST00000638142 DOPEY2Q9Y3R5 2298 aa14.73□□□□□ -0.05
SYNGAP1-227ENST00000638142 SPG11Q96JI7 2443 aa14.73□□□□□ -0.05
SYNGAP1-227ENST00000638142 FAM104AQ969W3 186 aa14.73□□□□□ -0.05
SYNGAP1-227ENST00000638142 VPREB3Q9UKI3 123 aa14.73□□□□□ -0.05
SYNGAP1-227ENST00000638142 A8MTW9 85 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 C9JAW5 83 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 TNFRSF18Q9Y5U5 241 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 COL12A1Q99715 3063 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 Q5PR19 223 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 PIK3CD-AS1Q5SR53 167 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 SPXQ9BT56 116 aa14.72□□□□□ -0.05
SYNGAP1-227ENST00000638142 IGHV3-73A0A0B4J1V6 119 aa14.71□□□□□ -0.05
SYNGAP1-227ENST00000638142 KNCNA6PVL3 124 aa14.71□□□□□ -0.05
SYNGAP1-227ENST00000638142 LINC01600Q96MT4 127 aa14.71□□□□□ -0.05
SYNGAP1-227ENST00000638142 HTN1P15515 57 aa14.7□□□□□ -0.06
SYNGAP1-227ENST00000638142 ZNF702PQ9H963 129 aa14.7□□□□□ -0.06
SYNGAP1-227ENST00000638142 IGHV1-58A0A0C4DH39 117 aa14.69□□□□□ -0.06
SYNGAP1-227ENST00000638142 PROK1P58294 105 aa14.69□□□□□ -0.06
SYNGAP1-227ENST00000638142 DEFB131AP59861 70 aa14.69□□□□□ -0.06
SYNGAP1-227ENST00000638142 LITAFQ99732 161 aa14.69□□□□□ -0.06
SYNGAP1-227ENST00000638142 SPANXA1Q9NS26 97 aa14.69□□□□□ -0.06
SYNGAP1-227ENST00000638142 H3BMM0 161 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms