RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 PHOX2AO14813 284 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 ATP6V1G1O75348 118 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 CRYBA4P53673 196 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 FAM3BP58499 235 aaPredicted RBP4.72□□□□□ -1.65
UPF3B-205ENST00000636792 NANOS2P60321 138 aaKnown RBP4.72□□□□□ -1.65
UPF3B-205ENST00000636792 FHL2Q14192 279 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 ZNF56Q15929 161 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 TMEM97Q5BJF2 176 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 ZNF479Q96JC4 524 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 DNAJC30Q96LL9 226 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 GNB1LQ9BYB4 327 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 ICOSQ9Y6W8 199 aa4.72□□□□□ -1.65
UPF3B-205ENST00000636792 HUWE1Q7Z6Z7 4374 aaKnown RBP4.72□□□□□ -1.65
UPF3B-205ENST00000636792 EVI2AP22794 236 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 TIRAPP58753 221 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 LINC00315P59091 139 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 RPL36AP83881 106 aaKnown RBP4.71□□□□□ -1.66
UPF3B-205ENST00000636792 ELOBQ15370 118 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 MRPL23Q16540 153 aaKnown RBP4.71□□□□□ -1.66
UPF3B-205ENST00000636792 FAM74A4Q5TZK3 123 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 FAM104BQ5XKR9 115 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 C14orf178Q8N769 122 aaPredicted RBP4.71□□□□□ -1.66
UPF3B-205ENST00000636792 RPL36ALQ969Q0 106 aaKnown RBP4.71□□□□□ -1.66
UPF3B-205ENST00000636792 COL7A1Q02388 2944 aa4.71□□□□□ -1.66
UPF3B-205ENST00000636792 NBEAL2Q6ZNJ1 2754 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 TRBV7-3A0A075B6L6 115 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 A0A087WWL8 130 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 TCAPO15273 167 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 LINC00694P0DN24 101 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 RPL32P62910 135 aaKnown RBP4.7□□□□□ -1.66
UPF3B-205ENST00000636792 MRPL54Q6P161 138 aaKnown RBP4.7□□□□□ -1.66
UPF3B-205ENST00000636792 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 YPEL4Q96NS1 127 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 NIT2Q9NQR4 276 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 MSRB1Q9NZV6 116 aa4.7□□□□□ -1.66
UPF3B-205ENST00000636792 F5H697 171 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 K7EMI3 77 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 M0QY20 66 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 MGPP08493 103 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 HTN3P15516 51 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 RAB4AP20338 218 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 SRIP30626 198 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 CAMPP49913 170 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 SUMO4Q6EEV6 95 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 TMEM88Q6PEY1 159 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 TMEM136Q6ZRR5 245 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 NEGR1Q7Z3B1 354 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 DAZ4Q86SG3 579 aaKnown RBP4.69□□□□□ -1.66
UPF3B-205ENST00000636792 ORMDL3Q8N138 153 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 VSIG2Q96IQ7 327 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 C20orf78Q9BR46 151 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 SAMD10Q9BYL1 202 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 JPT2Q9H910 190 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 DAZ3Q9NR90 486 aaKnown RBP4.69□□□□□ -1.66
UPF3B-205ENST00000636792 URGCP-MRPS24S4R325 110 aa4.69□□□□□ -1.66
UPF3B-205ENST00000636792 MUC21A0A0G2JKD1 596 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 MUC21A0A140T8X8 626 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 PRSS47A8MTI9 375 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 K7EP13 123 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 NCR2O95944 276 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 P0DMU3 169 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 FAM231AP0DMU4 169 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 FAM231CP0DMU5 169 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 PKIAP61925 76 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 CASC10Q5T4H9 136 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 AMN1Q8IY45 258 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 RNF185Q96GF1 192 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 TNFRSF18Q9Y5U5 241 aa4.68□□□□□ -1.66
UPF3B-205ENST00000636792 A0A096LPF7 62 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 TRBV27A0A0K0K1C4 114 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 LINC01549A6NIU2 74 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 IGLL5B9A064 214 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 GYPEP15421 78 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 CKS2P33552 79 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 UBE2D3P61077 147 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 UBE2D2P62837 147 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 MRPL51Q4U2R6 128 aaKnown RBP4.67□□□□□ -1.66
UPF3B-205ENST00000636792 OR10J3Q5JRS4 329 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 ATRAIDQ6UW56 229 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 CBLN2Q8IUK8 224 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 NEXN-AS1Q8NBZ9 246 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 ATP6V0E2Q8NHE4 81 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 UPK3BQ9BT76 320 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 CHCHD7Q9BUK0 85 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 GTSF1LQ9H1H1 148 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 APLNQ9ULZ1 77 aa4.67□□□□□ -1.66
UPF3B-205ENST00000636792 TGIF2-C20orf24A0A0A6YYL0 155 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 IGHV3-73A0A0B4J1V6 119 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 APCSP02743 223 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 CCL18P55774 89 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 SSTP61278 116 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 SUMO2P61956 95 aaKnown RBP4.66□□□□□ -1.66
UPF3B-205ENST00000636792 SMAGPQ0VAQ4 97 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 KIR2DL4Q99706 377 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 ST20Q9HBF5 79 aa4.66□□□□□ -1.66
UPF3B-205ENST00000636792 MRPS16Q9Y3D3 137 aaKnown RBP4.66□□□□□ -1.66
UPF3B-205ENST00000636792 DNAH7Q8WXX0 4024 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms