RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 Q6ZTI0 123 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 XAGE1AQ9HD64 81 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 TANC2Q9HCD6 1990 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 REG3AQ06141 175 aa13.67□□□□□ -0.22
CACNA1A-227ENST00000636549 SLX1AQ9BQ83 275 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 ACACAQ13085 2346 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 LINC00311Q8N616 119 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 ARHGAP21Q5T5U3 1957 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 IGLV2-11P01706 119 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 DSCAML1Q8TD84 2053 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 USP17L23D6RBM5 183 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 NFE4Q86UQ8 179 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 FAM236AA0A1B0GUQ0 79 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 FAM236BA0A1B0GV22 79 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 UBE2D2P62837 147 aa13.66□□□□□ -0.22
CACNA1A-227ENST00000636549 Q0VG73 95 aa13.65□□□□□ -0.22
CACNA1A-227ENST00000636549 LINC01548A6NM66 108 aa13.65□□□□□ -0.22
CACNA1A-227ENST00000636549 Q6ZUT4 128 aa13.65□□□□□ -0.22
CACNA1A-227ENST00000636549 C3orf84H3BNL1 204 aa13.65□□□□□ -0.22
CACNA1A-227ENST00000636549 PKDREJQ9NTG1 2253 aa13.64□□□□□ -0.23
CACNA1A-227ENST00000636549 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
CACNA1A-227ENST00000636549 WFDC10AQ9H1F0 79 aa13.63□□□□□ -0.23
CACNA1A-227ENST00000636549 LGALS9O00182 355 aa13.63□□□□□ -0.23
CACNA1A-227ENST00000636549 PRR4Q16378 134 aa13.63□□□□□ -0.23
CACNA1A-227ENST00000636549 C10orf99Q6UWK7 81 aa13.62□□□□□ -0.23
CACNA1A-227ENST00000636549 FAM236DA0A1B0GTK5 79 aa13.62□□□□□ -0.23
CACNA1A-227ENST00000636549 FAM236CP0DP71 79 aa13.62□□□□□ -0.23
CACNA1A-227ENST00000636549 A0A0B4J2C4 111 aa13.62□□□□□ -0.23
CACNA1A-227ENST00000636549 NDUFA11Q86Y39 141 aa13.62□□□□□ -0.23
CACNA1A-227ENST00000636549 PCNX2A6NKB5 2137 aa13.61□□□□□ -0.23
CACNA1A-227ENST00000636549 I3L2K1 104 aa13.61□□□□□ -0.23
CACNA1A-227ENST00000636549 C14orf177Q52M58 125 aa13.61□□□□□ -0.23
CACNA1A-227ENST00000636549 NANOS2P60321 138 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-227ENST00000636549 K7EIM0 57 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 C1orf158Q8N1D5 194 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 Q6ZS49 121 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 C22orf34Q6ZV56 151 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 PRO0255Q9UI72 69 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 C11orf53Q8IXP5 236 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 PRM2P04554 102 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 ROS1P08922 2347 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 CRYGBP07316 175 aa13.6□□□□□ -0.23
CACNA1A-227ENST00000636549 Q8N7P7 452 aa13.59□□□□□ -0.23
CACNA1A-227ENST00000636549 CHCHD10Q8WYQ3 142 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-227ENST00000636549 A0A0U1RQV1 116 aa13.59□□□□□ -0.23
CACNA1A-227ENST00000636549 C18orf65Q6ZTR6 163 aa13.59□□□□□ -0.23
CACNA1A-227ENST00000636549 CIRBP-AS1Q8TBR5 109 aa13.58□□□□□ -0.24
CACNA1A-227ENST00000636549 E7EUB6 86 aa13.57□□□□□ -0.24
CACNA1A-227ENST00000636549 PROK1P58294 105 aa13.57□□□□□ -0.24
CACNA1A-227ENST00000636549 UPK3BQ9BT76 320 aa13.57□□□□□ -0.24
CACNA1A-227ENST00000636549 PLA2G5P39877 138 aa13.57□□□□□ -0.24
CACNA1A-227ENST00000636549 IGLV11-55A0A075B6I3 123 aa13.57□□□□□ -0.24
CACNA1A-227ENST00000636549 ZNF843Q8N446 348 aa13.57□□□□□ -0.24
CACNA1A-227ENST00000636549 TRBV6-1A0A0K0K1D8 114 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 POM121L12Q8N7R1 296 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 KIR2DL5BQ8NHK3 375 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 K7ERS5 55 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 RSPO1Q2MKA7 263 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 BPY2O14599 106 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 WFDC13Q8IUB5 93 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 OXLD1Q5BKU9 147 aa13.56□□□□□ -0.24
CACNA1A-227ENST00000636549 LINC01620Q4KN68 170 aa13.55□□□□□ -0.24
CACNA1A-227ENST00000636549 KAAG1Q9UBP8 84 aa13.54□□□□□ -0.24
CACNA1A-227ENST00000636549 TNCP24821 2201 aa13.54□□□□□ -0.24
CACNA1A-227ENST00000636549 CLUHP3Q96NS8 147 aa13.54□□□□□ -0.24
CACNA1A-227ENST00000636549 ZNF106Q9H2Y7 1883 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-227ENST00000636549 TRBV10-1A0A0K0K1A3 114 aa13.53□□□□□ -0.24
CACNA1A-227ENST00000636549 CDPF1Q6NVV7 123 aa13.53□□□□□ -0.24
CACNA1A-227ENST00000636549 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
CACNA1A-227ENST00000636549 ZNF747Q9BV97 191 aa13.53□□□□□ -0.24
CACNA1A-227ENST00000636549 NLRC5Q86WI3 1866 aa13.53□□□□□ -0.24
CACNA1A-227ENST00000636549 LOC100131303A0A0U1RQF7 123 aa13.52□□□□□ -0.24
CACNA1A-227ENST00000636549 ZFAND2AQ8N6M9 145 aa13.52□□□□□ -0.24
CACNA1A-227ENST00000636549 BBC3Q96PG8 261 aaPredicted RBP13.52□□□□□ -0.25
CACNA1A-227ENST00000636549 H0YGX0 51 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 NOTCH3Q9UM47 2321 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 NDUFC2O95298 119 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 RNF152Q8N8N0 203 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 PTH2Q96A98 100 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 LINC00467Q9BRT7 94 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 SIVA1O15304 175 aa13.51□□□□□ -0.25
CACNA1A-227ENST00000636549 LY6LH3BQJ8 138 aa13.5□□□□□ -0.25
CACNA1A-227ENST00000636549 TMEM256-PLSCR3K7ERE1 68 aa13.5□□□□□ -0.25
CACNA1A-227ENST00000636549 C2orf16Q68DN1 1984 aa13.5□□□□□ -0.25
CACNA1A-227ENST00000636549 PIK3CD-AS1Q5SR53 167 aa13.5□□□□□ -0.25
CACNA1A-227ENST00000636549 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 MED14OSP0DP75 135 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 NUPR2A6NF83 97 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 FAM30AQ9NZY2 134 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 C11orf86A6NJI1 115 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 PCNX1Q96RV3 2341 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 SPINK1P00995 79 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 PATE2Q6UY27 113 aa13.49□□□□□ -0.25
CACNA1A-227ENST00000636549 Q6Q795 121 aa13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 Q6ZVQ6 151 aa13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 WFDC2Q14508 124 aa13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 SMIM20Q8N5G0 67 aa13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 Q8N976 141 aa13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 PLA2G1BP04054 148 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-227ENST00000636549 TOMM6Q96B49 74 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms