RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 ZNF705AQ6ZN79 300 aaPredicted RBP17.01■□□□□ 0.31
CAPNS1-216ENST00000628306 PRELID3AQ96N28 172 aa17.01■□□□□ 0.31
CAPNS1-216ENST00000628306 PRSS47A8MTI9 375 aa17■□□□□ 0.31
CAPNS1-216ENST00000628306 D6R8Y8 96 aa17■□□□□ 0.31
CAPNS1-216ENST00000628306 M0R2P5 195 aa17■□□□□ 0.31
CAPNS1-216ENST00000628306 S100A2P29034 98 aa17■□□□□ 0.31
CAPNS1-216ENST00000628306 SERF1AO75920 110 aa16.99■□□□□ 0.31
CAPNS1-216ENST00000628306 LINC00310P59036 64 aa16.99■□□□□ 0.31
CAPNS1-216ENST00000628306 CHCHD1Q96BP2 118 aaKnown RBP16.99■□□□□ 0.31
CAPNS1-216ENST00000628306 IFITM10A6NMD0 228 aa16.98■□□□□ 0.31
CAPNS1-216ENST00000628306 PPP1R17O96001 155 aa16.98■□□□□ 0.31
CAPNS1-216ENST00000628306 LINC00315P59091 139 aa16.98■□□□□ 0.31
CAPNS1-216ENST00000628306 ZNF876PQ49A33 203 aa16.98■□□□□ 0.31
CAPNS1-216ENST00000628306 TMEM18Q96B42 140 aa16.98■□□□□ 0.31
CAPNS1-216ENST00000628306 NACAE9PAV3 2078 aa16.97■□□□□ 0.31
CAPNS1-216ENST00000628306 SMIM17P0DL12 118 aa16.97■□□□□ 0.31
CAPNS1-216ENST00000628306 C14orf178Q8N769 122 aaPredicted RBP16.97■□□□□ 0.31
CAPNS1-216ENST00000628306 TMEM263Q8WUH6 116 aaKnown RBP16.97■□□□□ 0.31
CAPNS1-216ENST00000628306 HIST1H2BLQ99880 126 aa16.97■□□□□ 0.31
CAPNS1-216ENST00000628306 IGLV2-18A0A075B6J9 118 aa16.96■□□□□ 0.31
CAPNS1-216ENST00000628306 HTN1P15515 57 aa16.96■□□□□ 0.31
CAPNS1-216ENST00000628306 NIT1Q86X76 327 aa16.96■□□□□ 0.31
CAPNS1-216ENST00000628306 RNASE8Q8TDE3 154 aaKnown RBP16.96■□□□□ 0.31
CAPNS1-216ENST00000628306 NUPR1O60356 82 aa16.95■□□□□ 0.3
CAPNS1-216ENST00000628306 LINC00614P0C842 121 aa16.95■□□□□ 0.3
CAPNS1-216ENST00000628306 RASL10AQ92737 203 aa16.95■□□□□ 0.3
CAPNS1-216ENST00000628306 SMIM9A6NGZ8 99 aa16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 A8MWV9 139 aa16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 CRYGDP07320 174 aa16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 PMCHP20382 165 aa16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 DAZ2Q13117 558 aaKnown RBP16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 IQCJQ1A5X6 159 aa16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 DNAH5Q8TE73 4624 aa16.94■□□□□ 0.3
CAPNS1-216ENST00000628306 AZU1P20160 251 aa16.93■□□□□ 0.3
CAPNS1-216ENST00000628306 C16orf74Q96GX8 76 aa16.93■□□□□ 0.3
CAPNS1-216ENST00000628306 TNFRSF6BO95407 300 aa16.92■□□□□ 0.3
CAPNS1-216ENST00000628306 LINC01546A6NGU7 62 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 NPYP01303 97 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 SPART-AS1P0CW21 52 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 RRN3P1Q2M238 152 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 NRACQ8N912 160 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 URB1-AS1Q96HZ7 61 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 C20orf78Q9BR46 151 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 DKK2Q9UBU2 259 aa16.91■□□□□ 0.3
CAPNS1-216ENST00000628306 PDZD11Q5EBL8 140 aa16.9■□□□□ 0.3
CAPNS1-216ENST00000628306 PRSS3P2Q8NHM4 247 aa16.9■□□□□ 0.3
CAPNS1-216ENST00000628306 MAP1LC3AQ9H492 121 aa16.9■□□□□ 0.3
CAPNS1-216ENST00000628306 NXT2Q9NPJ8 142 aaKnown RBP16.9■□□□□ 0.3
CAPNS1-216ENST00000628306 IGHV3OR16-12A0A075B7B8 117 aa16.89■□□□□ 0.3
CAPNS1-216ENST00000628306 FABP4P15090 132 aa16.89■□□□□ 0.3
CAPNS1-216ENST00000628306 EMP1P54849 157 aa16.89■□□□□ 0.3
CAPNS1-216ENST00000628306 SMKR1H3BMG3 65 aa16.89■□□□□ 0.29
CAPNS1-216ENST00000628306 HSBP1O75506 76 aa16.89■□□□□ 0.29
CAPNS1-216ENST00000628306 PRM2P04554 102 aa16.89■□□□□ 0.29
CAPNS1-216ENST00000628306 RPL32P62910 135 aaKnown RBP16.89■□□□□ 0.29
CAPNS1-216ENST00000628306 JPT2Q9H910 190 aa16.89■□□□□ 0.29
CAPNS1-216ENST00000628306 RHODO00212 210 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 CIDEAO60543 219 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 NCR2O95944 276 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 AKR1D1P51857 326 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 FAM222AQ5U5X8 452 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 UFSP1Q6NVU6 142 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 ZFP2Q6ZN57 461 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 SAMD10Q9BYL1 202 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 AP5S1Q9NUS5 200 aa16.88■□□□□ 0.29
CAPNS1-216ENST00000628306 HERC1Q15751 4861 aa16.87■□□□□ 0.29
CAPNS1-216ENST00000628306 RS1O15537 224 aa16.87■□□□□ 0.29
CAPNS1-216ENST00000628306 FA2HQ7L5A8 372 aa16.87■□□□□ 0.29
CAPNS1-216ENST00000628306 UBE2DNLQ8IWF7 75 aa16.87■□□□□ 0.29
CAPNS1-216ENST00000628306 TRBV6-5A0A0K0K1A5 114 aa16.86■□□□□ 0.29
CAPNS1-216ENST00000628306 PLAC8L1A1L4L8 177 aa16.86■□□□□ 0.29
CAPNS1-216ENST00000628306 K7EMI3 77 aa16.86■□□□□ 0.29
CAPNS1-216ENST00000628306 GAS8-AS1O95177 125 aa16.86■□□□□ 0.29
CAPNS1-216ENST00000628306 RNASEKQ6P5S7 137 aaKnown RBP16.86■□□□□ 0.29
CAPNS1-216ENST00000628306 OR10D4PQ8NGN7 298 aa16.86■□□□□ 0.29
CAPNS1-216ENST00000628306 A0A087WWL8 130 aa16.85■□□□□ 0.29
CAPNS1-216ENST00000628306 MGPP08493 103 aa16.85■□□□□ 0.29
CAPNS1-216ENST00000628306 IFI27P40305 119 aaPredicted RBP16.85■□□□□ 0.29
CAPNS1-216ENST00000628306 C1orf134Q5TEV5 83 aa16.85■□□□□ 0.29
CAPNS1-216ENST00000628306 Q8N8P6 123 aa16.85■□□□□ 0.29
CAPNS1-216ENST00000628306 GATA1P15976 413 aaPredicted RBP16.84■□□□□ 0.29
CAPNS1-216ENST00000628306 AMTP48728 403 aa16.84■□□□□ 0.29
CAPNS1-216ENST00000628306 CFAP126Q5VTH2 177 aa16.84■□□□□ 0.29
CAPNS1-216ENST00000628306 TRAV26-2A0A0B4J265 109 aa16.83■□□□□ 0.28
CAPNS1-216ENST00000628306 H7C1H1 209 aa16.83■□□□□ 0.28
CAPNS1-216ENST00000628306 M0QY20 66 aa16.83■□□□□ 0.28
CAPNS1-216ENST00000628306 SUMO4Q6EEV6 95 aa16.83■□□□□ 0.28
CAPNS1-216ENST00000628306 F5H697 171 aa16.82■□□□□ 0.28
CAPNS1-216ENST00000628306 SUMO2P61956 95 aaKnown RBP16.82■□□□□ 0.28
CAPNS1-216ENST00000628306 TNP2Q05952 138 aa16.82■□□□□ 0.28
CAPNS1-216ENST00000628306 LOC389332A0A1B0GUA5 103 aa16.81■□□□□ 0.28
CAPNS1-216ENST00000628306 TEX48A0A1B0GUV7 120 aa16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 CDK2AP2O75956 126 aa16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 SMIM6P0DI80 62 aa16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 HTN3P15516 51 aa16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 FAM74A4Q5TZK3 123 aa16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 C18orf15Q96N68 181 aa16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 MRPL16Q9NX20 251 aaKnown RBP16.8■□□□□ 0.28
CAPNS1-216ENST00000628306 SMIM2Q9BVW6 85 aa16.79■□□□□ 0.28
CAPNS1-216ENST00000628306 NIT2Q9NQR4 276 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms