RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SRSF2Q01130 221 aaKnown RBP9.74□□□□□ -0.85
MSH6-215ENST00000622629 FOXI2Q6ZQN5 318 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 SH2D6Q7Z4S9 175 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
MSH6-215ENST00000622629 BBC3Q96PG8 261 aaPredicted RBP9.74□□□□□ -0.85
MSH6-215ENST00000622629 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 IGLL5B9A064 214 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 RNASE1P07998 156 aaKnown RBP9.73□□□□□ -0.85
MSH6-215ENST00000622629 GAGE4Q13068 117 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 GAGE5Q13069 117 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 TEX48A0A1B0GUV7 120 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 C10orf99Q6UWK7 81 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 ACANP16112 2415 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 A0A0J9YXV3 536 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 RHODO00212 210 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 Q6ZS46 218 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 ZFAND2AQ8N6M9 145 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 GPHB5Q86YW7 130 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 RASL10AQ92737 203 aa9.73□□□□□ -0.85
MSH6-215ENST00000622629 U3KQK5 164 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 TRBV7-9A0A0J9YWB2 115 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 C11orf86A6NJI1 115 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 K7EMT4 169 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 FGF6P10767 208 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 MRPL23Q16540 153 aaKnown RBP9.72□□□□□ -0.85
MSH6-215ENST00000622629 PRR9Q5T870 116 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 PRIMA1Q86XR5 153 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 MAP1AP78559 2803 aaPredicted RBP9.72□□□□□ -0.85
MSH6-215ENST00000622629 F8W1H4 67 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 TOMM6Q96B49 74 aa9.72□□□□□ -0.85
MSH6-215ENST00000622629 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
MSH6-215ENST00000622629 CLPSL1A2RUU4 121 aa9.71□□□□□ -0.85
MSH6-215ENST00000622629 HIGD1BQ9P298 99 aa9.71□□□□□ -0.85
MSH6-215ENST00000622629 PRO1854Q9UHT4 67 aa9.71□□□□□ -0.85
MSH6-215ENST00000622629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.71□□□□□ -0.85
MSH6-215ENST00000622629 IGKV2-29A2NJV5 120 aaPredicted RBP9.71□□□□□ -0.85
MSH6-215ENST00000622629 DEFB130BP0DP73 79 aa9.71□□□□□ -0.85
MSH6-215ENST00000622629 DEFB130AP0DP74 79 aa9.71□□□□□ -0.85
MSH6-215ENST00000622629 WFDC2Q14508 124 aa9.71□□□□□ -0.85
MSH6-215ENST00000622629 AZU1P20160 251 aa9.71□□□□□ -0.86
MSH6-215ENST00000622629 MORN3Q6PF18 240 aaPredicted RBP9.7□□□□□ -0.86
MSH6-215ENST00000622629 C2orf91Q6ZV80 131 aa9.7□□□□□ -0.86
MSH6-215ENST00000622629 C11orf68Q9H3H3 251 aaKnown RBP9.7□□□□□ -0.86
MSH6-215ENST00000622629 A0A0J9YX75 114 aa9.7□□□□□ -0.86
MSH6-215ENST00000622629 LINC00158P58513 81 aa9.7□□□□□ -0.86
MSH6-215ENST00000622629 TRAV12-1A0A0B4J245 112 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 SPINK8P0C7L1 97 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 DOPEY1Q5JWR5 2465 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 BOD1L1Q8NFC6 3051 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 GAGE7O76087 117 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 GAGE12FP0CL80 117 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 GAGE12GP0CL81 117 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 GAGE12IP0CL82 117 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 U3KQE9 123 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 RHOHQ15669 191 aa9.69□□□□□ -0.86
MSH6-215ENST00000622629 E9PLD3 99 aa9.68□□□□□ -0.86
MSH6-215ENST00000622629 RBX1P62877 108 aa9.68□□□□□ -0.86
MSH6-215ENST00000622629 C2orf82Q6UX34 121 aa9.68□□□□□ -0.86
MSH6-215ENST00000622629 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
MSH6-215ENST00000622629 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
MSH6-215ENST00000622629 TRAV8-3A0A0A6YYJ7 113 aa9.68□□□□□ -0.86
MSH6-215ENST00000622629 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
MSH6-215ENST00000622629 TRBV20-1A0A075B6N2 111 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 IGHG4P01861 327 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 MED14OSP0DP75 135 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 ATXN8Q156A1 80 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 ANKRD17O75179 2603 aaKnown RBP9.67□□□□□ -0.86
MSH6-215ENST00000622629 DMXL1Q9Y485 3027 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 C5orf47Q569G3 176 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 NRACQ8N912 160 aa9.67□□□□□ -0.86
MSH6-215ENST00000622629 A0A096LNJ9 63 aa9.66□□□□□ -0.86
MSH6-215ENST00000622629 GAGE12HA6NDE8 117 aa9.66□□□□□ -0.86
MSH6-215ENST00000622629 C10orf126Q8N4M7 172 aa9.66□□□□□ -0.86
MSH6-215ENST00000622629 HECTD1Q9ULT8 2610 aa9.66□□□□□ -0.86
MSH6-215ENST00000622629 HIST2H2BDQ6DRA6 164 aa9.65□□□□□ -0.86
MSH6-215ENST00000622629 P0DMU3 169 aa9.65□□□□□ -0.86
MSH6-215ENST00000622629 FAM231AP0DMU4 169 aa9.65□□□□□ -0.86
MSH6-215ENST00000622629 FAM231CP0DMU5 169 aa9.65□□□□□ -0.86
MSH6-215ENST00000622629 CEMP1Q6PRD7 247 aaPredicted RBP9.65□□□□□ -0.86
MSH6-215ENST00000622629 DEFB113Q30KQ7 82 aa9.65□□□□□ -0.86
MSH6-215ENST00000622629 TRAV8-4A0A0B4J246 113 aa9.65□□□□□ -0.87
MSH6-215ENST00000622629 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.87
MSH6-215ENST00000622629 TSPAN13O95857 204 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 AVPP01185 164 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 TIMM17AQ99595 171 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 CNFNQ9BYD5 112 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 PAX4O43316 350 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 CCL24O00175 119 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 RNASE3P12724 160 aaKnown RBP9.64□□□□□ -0.87
MSH6-215ENST00000622629 EDN2P20800 178 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 GAGE6Q13070 117 aa9.64□□□□□ -0.87
MSH6-215ENST00000622629 NOP10Q9NPE3 64 aaKnown RBP9.64□□□□□ -0.87
MSH6-215ENST00000622629 CMC4P56277 68 aaPredicted RBP9.63□□□□□ -0.87
MSH6-215ENST00000622629 K7EQG2 157 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 PPDPFLQ8WWR9 84 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 CFC1BP0CG36 223 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 CFC1P0CG37 223 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 NEXN-AS1Q8NBZ9 246 aa9.63□□□□□ -0.87
MSH6-215ENST00000622629 AGRNO00468 2067 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms