RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 CLPSL1A2RUU4 121 aa16.34■□□□□ 0.21
PCSK6-220ENST00000622483 RBAKDNA6NC62 111 aa16.34■□□□□ 0.21
PCSK6-220ENST00000622483 ZFAND3Q9H8U3 227 aa16.34■□□□□ 0.21
PCSK6-220ENST00000622483 GPHB5Q86YW7 130 aa16.34■□□□□ 0.21
PCSK6-220ENST00000622483 TMEM190Q8WZ59 177 aa16.33■□□□□ 0.21
PCSK6-220ENST00000622483 UBTD1Q9HAC8 227 aa16.33■□□□□ 0.21
PCSK6-220ENST00000622483 CREBBPQ92793 2442 aa16.33■□□□□ 0.2
PCSK6-220ENST00000622483 MRPL23Q16540 153 aaKnown RBP16.33■□□□□ 0.2
PCSK6-220ENST00000622483 OR10J6PQ8NGY7 276 aa16.33■□□□□ 0.2
PCSK6-220ENST00000622483 IGIPA6NJ69 53 aa16.32■□□□□ 0.2
PCSK6-220ENST00000622483 VPREB3Q9UKI3 123 aa16.32■□□□□ 0.2
PCSK6-220ENST00000622483 TNFRSF18Q9Y5U5 241 aa16.32■□□□□ 0.2
PCSK6-220ENST00000622483 SONP18583 2426 aaKnown RBP16.32■□□□□ 0.2
PCSK6-220ENST00000622483 LOC107984640A0A0U1RRK4 108 aa16.32■□□□□ 0.2
PCSK6-220ENST00000622483 M0QXV9 152 aa16.32■□□□□ 0.2
PCSK6-220ENST00000622483 CEMP1Q6PRD7 247 aaPredicted RBP16.31■□□□□ 0.2
PCSK6-220ENST00000622483 HECTD1Q9ULT8 2610 aa16.31■□□□□ 0.2
PCSK6-220ENST00000622483 PRRC2AP48634 2157 aaKnown RBP16.31■□□□□ 0.2
PCSK6-220ENST00000622483 IGHV4-4A0A075B6R2 117 aa16.31■□□□□ 0.2
PCSK6-220ENST00000622483 NBPF19A0A087WUL8 3843 aa16.31■□□□□ 0.2
PCSK6-220ENST00000622483 LGALS9O00182 355 aa16.3■□□□□ 0.2
PCSK6-220ENST00000622483 NRGNQ92686 78 aa16.3■□□□□ 0.2
PCSK6-220ENST00000622483 RNF5Q99942 180 aa16.3■□□□□ 0.2
PCSK6-220ENST00000622483 KLK5Q9Y337 293 aaPredicted RBP16.3■□□□□ 0.2
PCSK6-220ENST00000622483 IGHV7-81A0A0B4J1V7 117 aa16.3■□□□□ 0.2
PCSK6-220ENST00000622483 UBE2E1P51965 193 aa16.3■□□□□ 0.2
PCSK6-220ENST00000622483 RNASE13Q5GAN3 156 aaKnown RBP16.3■□□□□ 0.2
PCSK6-220ENST00000622483 SPXQ9BT56 116 aa16.3■□□□□ 0.2
PCSK6-220ENST00000622483 FAM236AA0A1B0GUQ0 79 aa16.29■□□□□ 0.2
PCSK6-220ENST00000622483 FAM236BA0A1B0GV22 79 aa16.29■□□□□ 0.2
PCSK6-220ENST00000622483 A8MZ25 164 aa16.29■□□□□ 0.2
PCSK6-220ENST00000622483 EEF1AKMT3Q96AZ1 226 aa16.29■□□□□ 0.2
PCSK6-220ENST00000622483 TENM4Q6N022 2769 aa16.29■□□□□ 0.2
PCSK6-220ENST00000622483 NPBQ8NG41 125 aa16.29■□□□□ 0.2
PCSK6-220ENST00000622483 ANKRD17O75179 2603 aaKnown RBP16.29■□□□□ 0.2
PCSK6-220ENST00000622483 SDHAF1A6NFY7 115 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 H7C423 109 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 ITLN2Q8WWU7 325 aaPredicted RBP16.28■□□□□ 0.2
PCSK6-220ENST00000622483 A0A0J9YXV3 536 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 TRBV10-2A0A0K0K1G8 114 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 OOSP1A8MZH6 123 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 TMEM95Q3KNT9 176 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 CCDC140Q96MF4 163 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 TRGV11A0A075B6L2 103 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 TRAV8-3A0A0A6YYJ7 113 aa16.28■□□□□ 0.2
PCSK6-220ENST00000622483 ZFAND2AQ8N6M9 145 aa16.27■□□□□ 0.2
PCSK6-220ENST00000622483 METTL26Q96S19 204 aa16.27■□□□□ 0.2
PCSK6-220ENST00000622483 YAE1D1Q9NRH1 226 aa16.27■□□□□ 0.2
PCSK6-220ENST00000622483 DAND5Q8N907 189 aa16.27■□□□□ 0.19
PCSK6-220ENST00000622483 TRAV12-3A0A0B4J271 114 aa16.26■□□□□ 0.19
PCSK6-220ENST00000622483 ATP6V0E1O15342 81 aa16.26■□□□□ 0.19
PCSK6-220ENST00000622483 LINC00694P0DN24 101 aa16.26■□□□□ 0.19
PCSK6-220ENST00000622483 C9orf47Q6ZRZ4 202 aa16.26■□□□□ 0.19
PCSK6-220ENST00000622483 SUMO4Q6EEV6 95 aa16.26■□□□□ 0.19
PCSK6-220ENST00000622483 RNASE3P12724 160 aaKnown RBP16.25■□□□□ 0.19
PCSK6-220ENST00000622483 ATP5J2P56134 94 aa16.25■□□□□ 0.19
PCSK6-220ENST00000622483 SETD2Q9BYW2 2564 aaPredicted RBP16.24■□□□□ 0.19
PCSK6-220ENST00000622483 NACAE9PAV3 2078 aa16.24■□□□□ 0.19
PCSK6-220ENST00000622483 ZNF876PQ49A33 203 aa16.24■□□□□ 0.19
PCSK6-220ENST00000622483 PAPPA-AS1Q5QFB9 102 aa16.24■□□□□ 0.19
PCSK6-220ENST00000622483 TRAV21A0A0B4J279 112 aa16.23■□□□□ 0.19
PCSK6-220ENST00000622483 ACANP16112 2415 aa16.23■□□□□ 0.19
PCSK6-220ENST00000622483 LINC01587Q99440 93 aa16.23■□□□□ 0.19
PCSK6-220ENST00000622483 ADAMTSL4-AS1Q5T5F5 129 aa16.23■□□□□ 0.19
PCSK6-220ENST00000622483 LINC00477Q96M19 166 aa16.23■□□□□ 0.19
PCSK6-220ENST00000622483 B9A039 149 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 P0DMU3 169 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 FAM231AP0DMU4 169 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 FAM231CP0DMU5 169 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 Q6Q795 121 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 MDFICQ9P1T7 246 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 VMO1Q7Z5L0 202 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 DUX5Q96PT3 197 aa16.22■□□□□ 0.19
PCSK6-220ENST00000622483 A0A0U1RRA0 63 aa16.21■□□□□ 0.19
PCSK6-220ENST00000622483 ICOSQ9Y6W8 199 aa16.21■□□□□ 0.19
PCSK6-220ENST00000622483 A0A0B4J2C4 111 aa16.21■□□□□ 0.18
PCSK6-220ENST00000622483 A0A0J9YXY3 114 aa16.21■□□□□ 0.18
PCSK6-220ENST00000622483 IGKV3-20P01619 116 aa16.21■□□□□ 0.18
PCSK6-220ENST00000622483 RPL13AP40429 203 aaKnown RBP16.2■□□□□ 0.18
PCSK6-220ENST00000622483 RS1O15537 224 aa16.2■□□□□ 0.18
PCSK6-220ENST00000622483 UNQ9165/PRO28630Q6UXU0 137 aa16.2■□□□□ 0.18
PCSK6-220ENST00000622483 ITPR2Q14571 2701 aa16.2■□□□□ 0.18
PCSK6-220ENST00000622483 C2CD3Q4AC94 2353 aa16.2■□□□□ 0.18
PCSK6-220ENST00000622483 NOTCH3Q9UM47 2321 aa16.19■□□□□ 0.18
PCSK6-220ENST00000622483 TMEM223A0PJW6 202 aa16.19■□□□□ 0.18
PCSK6-220ENST00000622483 LINC00315P59091 139 aa16.19■□□□□ 0.18
PCSK6-220ENST00000622483 TRBV12-3P01733 135 aa16.19■□□□□ 0.18
PCSK6-220ENST00000622483 POLR2KP53803 58 aaKnown RBP16.19■□□□□ 0.18
PCSK6-220ENST00000622483 C9orf153Q5TBE3 101 aa16.19■□□□□ 0.18
PCSK6-220ENST00000622483 VCYO14598 125 aa16.18■□□□□ 0.18
PCSK6-220ENST00000622483 UBR5O95071 2799 aaPredicted RBP16.18■□□□□ 0.18
PCSK6-220ENST00000622483 LEPROTO15243 131 aa16.18■□□□□ 0.18
PCSK6-220ENST00000622483 FBXL19-AS1Q494R0 122 aa16.18■□□□□ 0.18
PCSK6-220ENST00000622483 Q8N9W7 124 aa16.18■□□□□ 0.18
PCSK6-220ENST00000622483 M0R2P5 195 aa16.17■□□□□ 0.18
PCSK6-220ENST00000622483 TRAV16A0A0A6YYK6 109 aaPredicted RBP16.17■□□□□ 0.18
PCSK6-220ENST00000622483 IGHV1-69DA0A0B4J2H0 117 aa16.16■□□□□ 0.18
PCSK6-220ENST00000622483 TMEM141Q96I45 108 aa16.16■□□□□ 0.18
PCSK6-220ENST00000622483 IGHV3-30-3P0DP02 117 aa16.15■□□□□ 0.18
PCSK6-220ENST00000622483 TMEM219Q86XT9 240 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms