RNA–Protein interactions for RNA: ENST00000616236.1

RFC3-203, Transcript of replication factor C subunit 3, humanhuman

TSL 3

Gene RFC3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-203ENST00000616236 CCL8P80075 99 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 C5orf38Q86SI9 138 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 C20orf197Q8N268 126 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 VPS8Q8N3P4 1428 aa1.87□□□□□ -2.11
RFC3-203ENST00000616236 CAV3P56539 151 aa1.86□□□□□ -2.11
RFC3-203ENST00000616236 RP1L1Q8IWN7 2480 aaPredicted RBP1.85□□□□□ -2.11
RFC3-203ENST00000616236 MED12Q93074 2177 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 CASKIN1Q8WXD9 1431 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 KDM6BO15054 1643 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 CCL3L1P16619 93 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 ZNF56Q15929 161 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 LINC00575Q6W349 94 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 ZNF818PQ6ZRF7 136 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 Q6ZSA8 131 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 ACBD7Q8N6N7 88 aa1.85□□□□□ -2.11
RFC3-203ENST00000616236 SPHKAPQ2M3C7 1700 aa1.84□□□□□ -2.11
RFC3-203ENST00000616236 TRBV30A0A0K0K1B3 111 aa1.84□□□□□ -2.11
RFC3-203ENST00000616236 C4orf33Q8N1A6 199 aa1.84□□□□□ -2.11
RFC3-203ENST00000616236 AQP10Q96PS8 301 aa1.84□□□□□ -2.11
RFC3-203ENST00000616236 DPH3P1Q9H4G8 78 aa1.84□□□□□ -2.11
RFC3-203ENST00000616236 CC2D2AQ9P2K1 1620 aa1.84□□□□□ -2.12
RFC3-203ENST00000616236 TNS1Q9HBL0 1735 aaKnown RBP1.83□□□□□ -2.12
RFC3-203ENST00000616236 DOCK2Q92608 1830 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 UBE2L5PA0A1B0GUS4 154 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 A0A1W2PPM0 123 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 CLPSL1A2RUU4 121 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 SIX6O95475 246 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 S100A10P60903 97 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 UBE2L3P68036 154 aaKnown RBP1.83□□□□□ -2.12
RFC3-203ENST00000616236 SSBP1Q04837 148 aaKnown RBP1.83□□□□□ -2.12
RFC3-203ENST00000616236 NCMAPQ5T1S8 102 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 COMMD6Q7Z4G1 85 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 COX7B2Q8TF08 81 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 BET1LQ9NYM9 111 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 LINC00312Q9Y6C7 94 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 NOTCH2Q04721 2471 aa1.83□□□□□ -2.12
RFC3-203ENST00000616236 M0R143 59 aa1.82□□□□□ -2.12
RFC3-203ENST00000616236 SSSCA1O60232 199 aa1.82□□□□□ -2.12
RFC3-203ENST00000616236 ELOF1P60002 83 aaKnown RBP1.82□□□□□ -2.12
RFC3-203ENST00000616236 KLKP1Q107X0 134 aa1.82□□□□□ -2.12
RFC3-203ENST00000616236 TTC9CQ8N5M4 171 aa1.82□□□□□ -2.12
RFC3-203ENST00000616236 PPP1R1CQ8WVI7 109 aa1.82□□□□□ -2.12
RFC3-203ENST00000616236 SHROOM2Q13796 1616 aa1.81□□□□□ -2.12
RFC3-203ENST00000616236 ANGP03950 147 aaKnown RBP1.81□□□□□ -2.12
RFC3-203ENST00000616236 ATP5EP56381 51 aaPredicted RBP1.81□□□□□ -2.12
RFC3-203ENST00000616236 C10orf71Q711Q0 1435 aa1.81□□□□□ -2.12
RFC3-203ENST00000616236 AKAP12Q02952 1782 aa1.8□□□□□ -2.12
RFC3-203ENST00000616236 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.8□□□□□ -2.12
RFC3-203ENST00000616236 TRBV7-1A0A0A6YYK4 115 aa1.8□□□□□ -2.12
RFC3-203ENST00000616236 RBAKDNA6NC62 111 aa1.8□□□□□ -2.12
RFC3-203ENST00000616236 DCDP81605 110 aaKnown RBP1.8□□□□□ -2.12
RFC3-203ENST00000616236 LINC00474Q9P2X8 69 aa1.8□□□□□ -2.12
RFC3-203ENST00000616236 A0A087WTM6 91 aa1.79□□□□□ -2.12
RFC3-203ENST00000616236 TMEM262E9PQX1 116 aa1.79□□□□□ -2.12
RFC3-203ENST00000616236 C10orf128Q5T292 105 aa1.79□□□□□ -2.12
RFC3-203ENST00000616236 FAM74A4Q5TZK3 123 aa1.79□□□□□ -2.12
RFC3-203ENST00000616236 TCHHQ07283 1943 aa1.79□□□□□ -2.12
RFC3-203ENST00000616236 MED13LQ71F56 2210 aa1.79□□□□□ -2.12
RFC3-203ENST00000616236 COL6A6A6NMZ7 2263 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 ABCA3Q99758 1704 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 ARHGAP5Q13017 1502 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 ABCC10Q5T3U5 1492 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 PPIP5K1Q6PFW1 1433 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 SNCAP37840 140 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 C10orf99Q6UWK7 81 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 TSLPQ969D9 159 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 CYP4F30PQ9H0H9 118 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 TMEM14BQ9NUH8 114 aa1.78□□□□□ -2.12
RFC3-203ENST00000616236 LOC285556D6RIA3 1793 aa1.77□□□□□ -2.13
RFC3-203ENST00000616236 MPC2O95563 127 aa1.77□□□□□ -2.13
RFC3-203ENST00000616236 EDDM3BP56851 147 aa1.77□□□□□ -2.13
RFC3-203ENST00000616236 PKIAP61925 76 aa1.77□□□□□ -2.13
RFC3-203ENST00000616236 MYOZ3Q8TDC0 251 aa1.77□□□□□ -2.13
RFC3-203ENST00000616236 V9GYV3 84 aa1.77□□□□□ -2.13
RFC3-203ENST00000616236 SCAPERQ9BY12 1400 aa1.76□□□□□ -2.13
RFC3-203ENST00000616236 PSME4Q14997 1843 aa1.76□□□□□ -2.13
RFC3-203ENST00000616236 ABCA1O95477 2261 aa1.76□□□□□ -2.13
RFC3-203ENST00000616236 LRRC37A3O60309 1634 aa1.76□□□□□ -2.13
RFC3-203ENST00000616236 TET3O43151 1660 aa1.75□□□□□ -2.13
RFC3-203ENST00000616236 KRTAP21-3Q3LHN1 58 aa1.75□□□□□ -2.13
RFC3-203ENST00000616236 CNTRLQ7Z7A1 2325 aa1.75□□□□□ -2.13
RFC3-203ENST00000616236 MAP2P11137 1827 aaKnown RBP1.75□□□□□ -2.13
RFC3-203ENST00000616236 PRDM2Q13029 1718 aa1.74□□□□□ -2.13
RFC3-203ENST00000616236 H3BQ15 152 aa1.74□□□□□ -2.13
RFC3-203ENST00000616236 GNG11P61952 73 aa1.74□□□□□ -2.13
RFC3-203ENST00000616236 PLAC4Q8WY50 150 aa1.74□□□□□ -2.13
RFC3-203ENST00000616236 DOCK11Q5JSL3 2073 aa1.74□□□□□ -2.13
RFC3-203ENST00000616236 SIPA1L3O60292 1781 aaPredicted RBP1.74□□□□□ -2.13
RFC3-203ENST00000616236 ZDBF2Q9HCK1 2354 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 ROS1P08922 2347 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 LY6G6CO95867 125 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 LCE1CQ5T751 118 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 LCE1BQ5T7P3 118 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 ANKRD26Q9UPS8 1709 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 PXDNQ92626 1479 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 PI4KAP42356 2102 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 ZNF609O15014 1411 aa1.73□□□□□ -2.13
RFC3-203ENST00000616236 TANC1Q9C0D5 1861 aa1.72□□□□□ -2.13
RFC3-203ENST00000616236 TOPAZ1Q8N9V7 1692 aa1.72□□□□□ -2.13
RFC3-203ENST00000616236 TRBV7-3A0A075B6L6 115 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms