RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 NIT1Q86X76 327 aa5.78□□□□□ -1.48
TARDBP-213ENST00000611963 RNF183Q96D59 192 aa5.78□□□□□ -1.48
TARDBP-213ENST00000611963 MAP1LC3AQ9H492 121 aa5.78□□□□□ -1.48
TARDBP-213ENST00000611963 SMIM9A6NGZ8 99 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 PAX4O43316 350 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 P0DMU3 169 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 FAM231AP0DMU4 169 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 FAM231CP0DMU5 169 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 FABP4P15090 132 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 PMCHP20382 165 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 S100A2P29034 98 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 AKR1D1P51857 326 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 PMCHL1Q16048 86 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 LGALS9BQ3B8N2 356 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 DEFB121Q5J5C9 76 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 Q6ZSN1 163 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 Q6ZWC4 215 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 FA2HQ7L5A8 372 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 OR4C5Q8NGB2 326 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 OVOL2Q9BRP0 275 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 LAMTOR2Q9Y2Q5 125 aa5.77□□□□□ -1.49
TARDBP-213ENST00000611963 COL7A1Q02388 2944 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 TRGV2A0A075B6R0 118 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 TRAV4A0A0B4J268 109 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 M0QY20 66 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 RHODO00212 210 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 ESDP10768 282 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 NEGR1Q7Z3B1 354 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 KRTAP19-1Q8IUB9 90 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 FAM19A2Q8N3H0 131 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 Q8NAQ8 132 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 PRSS3P2Q8NHM4 247 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 ZNF479Q96JC4 524 aa5.76□□□□□ -1.49
TARDBP-213ENST00000611963 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.76□□□□□ -1.49
TARDBP-213ENST00000611963 IGLV2-18A0A075B6J9 118 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 HSBP1O75506 76 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 LINC00614P0C842 121 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 DEFB130BP0DP73 79 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 DEFB130AP0DP74 79 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 MIFP14174 115 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 AMTP48728 403 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 SUMO2P61956 95 aaKnown RBP5.75□□□□□ -1.49
TARDBP-213ENST00000611963 FAM222AQ5U5X8 452 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 OR10D4PQ8NGN7 298 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 CHCHD1Q96BP2 118 aaKnown RBP5.75□□□□□ -1.49
TARDBP-213ENST00000611963 B9D2Q9BPU9 175 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 NDUFAF3Q9BU61 184 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 SMIM2Q9BVW6 85 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 Q9UF83 564 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 CELA1Q9UNI1 258 aa5.75□□□□□ -1.49
TARDBP-213ENST00000611963 IGHV1-24A0A0C4DH33 117 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 TCAPO15273 167 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 ZFP2Q6ZN57 461 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 SBSPONQ8IVN8 264 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 LINC00612Q8N6U2 182 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 Q8N8P6 123 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 TMEM18Q96B42 140 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 ST20Q9HBF5 79 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 NXT2Q9NPJ8 142 aaKnown RBP5.74□□□□□ -1.49
TARDBP-213ENST00000611963 AP5S1Q9NUS5 200 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 DKK2Q9UBU2 259 aa5.74□□□□□ -1.49
TARDBP-213ENST00000611963 TRBV6-5A0A0K0K1A5 114 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 LYRM9A8MSI8 78 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 PRSS47A8MTI9 375 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 H7C1H1 209 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 PPP1R17O96001 155 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 LINC00173Q6ZV60 143 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 PACRGQ96M98 296 aaPredicted RBP5.73□□□□□ -1.49
TARDBP-213ENST00000611963 C20orf78Q9BR46 151 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 TMEM70Q9BUB7 260 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 EDA2RQ9HAV5 297 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 NIT2Q9NQR4 276 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 TP53TG1Q9Y2A0 90 aa5.73□□□□□ -1.49
TARDBP-213ENST00000611963 A0A096LNJ9 63 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 TRGV4A0A0C4DH28 118 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 LOC100131303A0A0U1RQF7 123 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 SDHAF1A6NFY7 115 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 LINC01546A6NGU7 62 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 K7EQD1 137 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 POLR2KP53803 58 aaKnown RBP5.72□□□□□ -1.49
TARDBP-213ENST00000611963 DAD1P61803 113 aa5.72□□□□□ -1.49
TARDBP-213ENST00000611963 RPL32P62910 135 aaKnown RBP5.71□□□□□ -1.5
TARDBP-213ENST00000611963 FHL2Q14192 279 aa5.71□□□□□ -1.5
TARDBP-213ENST00000611963 SLC25A29Q8N8R3 303 aa5.71□□□□□ -1.5
TARDBP-213ENST00000611963 TNFRSF18Q9Y5U5 241 aa5.71□□□□□ -1.5
TARDBP-213ENST00000611963 IGHV3-38A0A0C4DH36 116 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 A0A0J9YWU9 116 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 TRBV27A0A0K0K1C4 114 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 GAGE12JA6NER3 117 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 VCYO14598 125 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 NUDT3O95989 172 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 TSHBP01222 138 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 HBDP02042 147 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 SPART-AS1P0CW21 52 aa5.7□□□□□ -1.5
TARDBP-213ENST00000611963 BTF3P20290 206 aaKnown RBP5.7□□□□□ -1.5
TARDBP-213ENST00000611963 KRTDAPP60985 99 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms