RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 MIR7-3HGQ8N6C7 128 aa16.06■□□□□ 0.16
SH3D19-211ENST00000604030 NOTCH3Q9UM47 2321 aa16.06■□□□□ 0.16
SH3D19-211ENST00000604030 CHD3Q12873 2000 aaKnown RBP16.06■□□□□ 0.16
SH3D19-211ENST00000604030 ADORA2A-AS1P86434 159 aa16.05■□□□□ 0.16
SH3D19-211ENST00000604030 CLEC2BQ92478 149 aa16.05■□□□□ 0.16
SH3D19-211ENST00000604030 RPL18AQ02543 176 aaKnown RBP16.05■□□□□ 0.16
SH3D19-211ENST00000604030 GDF5OSQ5U4N7 250 aa16.05■□□□□ 0.16
SH3D19-211ENST00000604030 CRYGBP07316 175 aa16.05■□□□□ 0.16
SH3D19-211ENST00000604030 ZFP36P26651 326 aaKnown RBP16.05■□□□□ 0.16
SH3D19-211ENST00000604030 TCL1BO95988 128 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 CCL18P55774 89 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 MSMPQ1L6U9 139 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 NEXN-AS1Q8NBZ9 246 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 TIRAPP58753 221 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 HIST2H2BDQ6DRA6 164 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 A0A0J9YXY3 114 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 SPAG11BQ08648 103 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 LINC00322Q6ZN03 302 aaPredicted RBP16.04■□□□□ 0.16
SH3D19-211ENST00000604030 DAND5Q8N907 189 aa16.04■□□□□ 0.16
SH3D19-211ENST00000604030 LOXL1Q08397 574 aaPredicted RBP16.03■□□□□ 0.16
SH3D19-211ENST00000604030 CRIP3Q6Q6R5 217 aa16.03■□□□□ 0.16
SH3D19-211ENST00000604030 H7C423 109 aa16.03■□□□□ 0.16
SH3D19-211ENST00000604030 ZNF80P51504 273 aaPredicted RBP16.03■□□□□ 0.16
SH3D19-211ENST00000604030 Q6ZPA2 131 aa16.03■□□□□ 0.16
SH3D19-211ENST00000604030 NFE4Q86UQ8 179 aa16.03■□□□□ 0.16
SH3D19-211ENST00000604030 U3KQK5 164 aa16.03■□□□□ 0.16
SH3D19-211ENST00000604030 NDUFS5O43920 106 aa16.02■□□□□ 0.16
SH3D19-211ENST00000604030 Q6ZUT4 128 aa16.02■□□□□ 0.16
SH3D19-211ENST00000604030 HIGD2BQ4VC39 106 aa16.02■□□□□ 0.16
SH3D19-211ENST00000604030 ATP5EP2Q5VTU8 51 aa16.02■□□□□ 0.16
SH3D19-211ENST00000604030 OBSL1O75147 1896 aa16.02■□□□□ 0.15
SH3D19-211ENST00000604030 CCDC140Q96MF4 163 aa16.01■□□□□ 0.15
SH3D19-211ENST00000604030 NBASA2RRP1 2371 aa16.01■□□□□ 0.15
SH3D19-211ENST00000604030 INSL3P51460 131 aa16.01■□□□□ 0.15
SH3D19-211ENST00000604030 PRO0255Q9UI72 69 aa16.01■□□□□ 0.15
SH3D19-211ENST00000604030 IGLV10-54A0A075B6I4 117 aa16.01■□□□□ 0.15
SH3D19-211ENST00000604030 ZNF106Q9H2Y7 1883 aaKnown RBP16■□□□□ 0.15
SH3D19-211ENST00000604030 UNQ9165/PRO28630Q6UXU0 137 aa16■□□□□ 0.15
SH3D19-211ENST00000604030 TNFRSF13BO14836 293 aaPredicted RBP16■□□□□ 0.15
SH3D19-211ENST00000604030 Q9HAA7 133 aa16■□□□□ 0.15
SH3D19-211ENST00000604030 IGF1P05019 195 aa15.99■□□□□ 0.15
SH3D19-211ENST00000604030 DENND4AQ7Z401 1863 aa15.99■□□□□ 0.15
SH3D19-211ENST00000604030 P0DMU3 169 aa15.99■□□□□ 0.15
SH3D19-211ENST00000604030 FAM231AP0DMU4 169 aa15.99■□□□□ 0.15
SH3D19-211ENST00000604030 FAM231CP0DMU5 169 aa15.99■□□□□ 0.15
SH3D19-211ENST00000604030 SPATA25Q9BR10 227 aa15.98■□□□□ 0.15
SH3D19-211ENST00000604030 PCNX1Q96RV3 2341 aa15.98■□□□□ 0.15
SH3D19-211ENST00000604030 IGHV4-4A0A075B6R2 117 aa15.97■□□□□ 0.15
SH3D19-211ENST00000604030 TRAV26-1A0A087WT03 109 aa15.97■□□□□ 0.15
SH3D19-211ENST00000604030 NCR3O14931 201 aa15.97■□□□□ 0.15
SH3D19-211ENST00000604030 EBI3Q14213 229 aa15.97■□□□□ 0.15
SH3D19-211ENST00000604030 PTH2Q96A98 100 aa15.97■□□□□ 0.15
SH3D19-211ENST00000604030 NACAE9PAV3 2078 aa15.96■□□□□ 0.15
SH3D19-211ENST00000604030 UQCRQO14949 82 aa15.96■□□□□ 0.15
SH3D19-211ENST00000604030 COX7BP24311 80 aa15.96■□□□□ 0.15
SH3D19-211ENST00000604030 UFSP1Q6NVU6 142 aa15.96■□□□□ 0.15
SH3D19-211ENST00000604030 WFDC9Q8NEX5 89 aa15.96■□□□□ 0.15
SH3D19-211ENST00000604030 IGHV3-30P01768 117 aa15.96■□□□□ 0.14
SH3D19-211ENST00000604030 IGHV3-33P01772 117 aa15.96■□□□□ 0.14
SH3D19-211ENST00000604030 IGHV3-30-5P0DP03 117 aa15.96■□□□□ 0.14
SH3D19-211ENST00000604030 MAP6D1Q9H9H5 199 aa15.95■□□□□ 0.14
SH3D19-211ENST00000604030 NDUFV3P56181 108 aaKnown RBP15.95■□□□□ 0.14
SH3D19-211ENST00000604030 TMEM223A0PJW6 202 aa15.94■□□□□ 0.14
SH3D19-211ENST00000604030 TRBV12-3P01733 135 aa15.94■□□□□ 0.14
SH3D19-211ENST00000604030 TRBV30A0A0K0K1B3 111 aa15.94■□□□□ 0.14
SH3D19-211ENST00000604030 A0A1W2PNU3 283 aaPredicted RBP15.93■□□□□ 0.14
SH3D19-211ENST00000604030 TP53TG3Q9ULZ0 132 aa15.93■□□□□ 0.14
SH3D19-211ENST00000604030 K7EQG2 157 aa15.93■□□□□ 0.14
SH3D19-211ENST00000604030 TP73-AS1Q9UF72 201 aa15.93■□□□□ 0.14
SH3D19-211ENST00000604030 ZFAND2AQ8N6M9 145 aa15.92■□□□□ 0.14
SH3D19-211ENST00000604030 ZGRF1Q86YA3 2104 aa15.92■□□□□ 0.14
SH3D19-211ENST00000604030 ZNF22P17026 224 aaPredicted RBP15.92■□□□□ 0.14
SH3D19-211ENST00000604030 CHKB-CPT1BH3BT56 60 aa15.91■□□□□ 0.14
SH3D19-211ENST00000604030 TIMM17BO60830 172 aa15.91■□□□□ 0.14
SH3D19-211ENST00000604030 TRBV6-5A0A0K0K1A5 114 aa15.91■□□□□ 0.14
SH3D19-211ENST00000604030 C5orf47Q569G3 176 aa15.91■□□□□ 0.14
SH3D19-211ENST00000604030 IBA57-AS1B1ANH7 110 aa15.9■□□□□ 0.14
SH3D19-211ENST00000604030 PYGO1Q9Y3Y4 419 aa15.9■□□□□ 0.14
SH3D19-211ENST00000604030 SMIM9A6NGZ8 99 aa15.9■□□□□ 0.14
SH3D19-211ENST00000604030 LMO4P61968 165 aa15.9■□□□□ 0.14
SH3D19-211ENST00000604030 IGHV4-28A0A0C4DH34 117 aa15.9■□□□□ 0.14
SH3D19-211ENST00000604030 CLPSL1A2RUU4 121 aa15.89■□□□□ 0.13
SH3D19-211ENST00000604030 C14orf132Q9NPU4 83 aa15.89■□□□□ 0.13
SH3D19-211ENST00000604030 IGLV4-3A0A075B6K6 122 aa15.89■□□□□ 0.13
SH3D19-211ENST00000604030 DEFB1P60022 68 aa15.89■□□□□ 0.13
SH3D19-211ENST00000604030 ZFAND3Q9H8U3 227 aa15.88■□□□□ 0.13
SH3D19-211ENST00000604030 LY6LH3BQJ8 138 aa15.88■□□□□ 0.13
SH3D19-211ENST00000604030 PCNX2A6NKB5 2137 aa15.87■□□□□ 0.13
SH3D19-211ENST00000604030 RNF183Q96D59 192 aa15.87■□□□□ 0.13
SH3D19-211ENST00000604030 RNF185Q96GF1 192 aa15.87■□□□□ 0.13
SH3D19-211ENST00000604030 KLK12Q9UKR0 248 aa15.87■□□□□ 0.13
SH3D19-211ENST00000604030 FAM222AQ5U5X8 452 aa15.87■□□□□ 0.13
SH3D19-211ENST00000604030 IMUPQ9GZP8 106 aa15.87■□□□□ 0.13
SH3D19-211ENST00000604030 UBE2AP49459 152 aa15.86■□□□□ 0.13
SH3D19-211ENST00000604030 UPK3BQ9BT76 320 aa15.86■□□□□ 0.13
SH3D19-211ENST00000604030 MT-ATP8P03928 68 aa15.86■□□□□ 0.13
SH3D19-211ENST00000604030 TRBV27A0A0K0K1C4 114 aa15.85■□□□□ 0.13
SH3D19-211ENST00000604030 C1orf229Q6ZS94 237 aaPredicted RBP15.85■□□□□ 0.13
SH3D19-211ENST00000604030 LINC00308Q8TCZ7 52 aa15.85■□□□□ 0.13
SH3D19-211ENST00000604030 LYRM9A8MSI8 78 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 110.8 ms