RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 SIVA1O15304 175 aa9.51□□□□□ -0.89
RNF40-212ENST00000602784 RASL11AQ6T310 242 aa9.51□□□□□ -0.89
RNF40-212ENST00000602784 CARHSP1Q9Y2V2 147 aaKnown RBP9.51□□□□□ -0.89
RNF40-212ENST00000602784 DNAH6Q9C0G6 4158 aa9.51□□□□□ -0.89
RNF40-212ENST00000602784 RYR3Q15413 4870 aa9.5□□□□□ -0.89
RNF40-212ENST00000602784 LELP1Q5T871 98 aa9.5□□□□□ -0.89
RNF40-212ENST00000602784 NIT2Q9NQR4 276 aa9.5□□□□□ -0.89
RNF40-212ENST00000602784 IGLV2-18A0A075B6J9 118 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 TRAV8-6A0A0B4J262 113 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 NBDYA0A0U1RRE5 68 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 K7EP13 123 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 S100A8P05109 93 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 TTC32Q5I0X7 151 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.49□□□□□ -0.89
RNF40-212ENST00000602784 IMMP2LQ96T52 175 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 CTDSP1Q9GZU7 261 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 TNFRSF18Q9Y5U5 241 aa9.49□□□□□ -0.89
RNF40-212ENST00000602784 ATP5L2Q7Z4Y8 100 aa9.48□□□□□ -0.89
RNF40-212ENST00000602784 DAZ4Q86SG3 579 aaKnown RBP9.48□□□□□ -0.89
RNF40-212ENST00000602784 GATD1Q8NB37 220 aa9.48□□□□□ -0.89
RNF40-212ENST00000602784 DAZ3Q9NR90 486 aaKnown RBP9.48□□□□□ -0.89
RNF40-212ENST00000602784 HYDINQ4G0P3 5121 aa9.48□□□□□ -0.89
RNF40-212ENST00000602784 A0A1B0GXF2 115 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 M0R2N4 97 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
RNF40-212ENST00000602784 RAB4AP20338 218 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 TMEM97Q5BJF2 176 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 OR10J3Q5JRS4 329 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 TMEM242Q9NWH2 141 aa9.47□□□□□ -0.89
RNF40-212ENST00000602784 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
RNF40-212ENST00000602784 IGHV3-38A0A0C4DH36 116 aa9.46□□□□□ -0.9
RNF40-212ENST00000602784 HBBP68871 147 aa9.46□□□□□ -0.9
RNF40-212ENST00000602784 WFDC10BQ8IUB3 73 aa9.46□□□□□ -0.9
RNF40-212ENST00000602784 MRAP2Q96G30 205 aa9.46□□□□□ -0.9
RNF40-212ENST00000602784 RNF185Q96GF1 192 aa9.46□□□□□ -0.9
RNF40-212ENST00000602784 TRAV26-2A0A0B4J265 109 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 CAMPP49913 170 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 RHEBQ15382 184 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 LINC01556Q5JQF7 62 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 FAM104BQ5XKR9 115 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 AMN1Q8IY45 258 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 CLRN3Q8NCR9 226 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 BTF3L4Q96K17 158 aa9.45□□□□□ -0.9
RNF40-212ENST00000602784 TRBV6-8A0A0A6YYG3 113 aa9.44□□□□□ -0.9
RNF40-212ENST00000602784 TRBV6-5A0A0K0K1A5 114 aa9.44□□□□□ -0.9
RNF40-212ENST00000602784 C7orf77A4D0Y5 90 aa9.44□□□□□ -0.9
RNF40-212ENST00000602784 NDUFA5Q16718 116 aa9.44□□□□□ -0.9
RNF40-212ENST00000602784 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
RNF40-212ENST00000602784 TRAV9-1A0A075B6T8 112 aa9.43□□□□□ -0.9
RNF40-212ENST00000602784 PPP1R17O96001 155 aa9.43□□□□□ -0.9
RNF40-212ENST00000602784 C1orf134Q5TEV5 83 aa9.43□□□□□ -0.9
RNF40-212ENST00000602784 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
RNF40-212ENST00000602784 KRTAP1-5Q9BYS1 174 aa9.43□□□□□ -0.9
RNF40-212ENST00000602784 MRPL51Q4U2R6 128 aaKnown RBP9.42□□□□□ -0.9
RNF40-212ENST00000602784 KCNIP4Q6PIL6 250 aa9.42□□□□□ -0.9
RNF40-212ENST00000602784 NTM-AS1Q6ZSK4 140 aa9.42□□□□□ -0.9
RNF40-212ENST00000602784 SVBPQ8N300 66 aa9.42□□□□□ -0.9
RNF40-212ENST00000602784 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
RNF40-212ENST00000602784 APOC3P02656 99 aa9.41□□□□□ -0.9
RNF40-212ENST00000602784 IQCJQ1A5X6 159 aa9.41□□□□□ -0.9
RNF40-212ENST00000602784 NIT1Q86X76 327 aa9.41□□□□□ -0.9
RNF40-212ENST00000602784 C6orf223Q8N319 242 aa9.41□□□□□ -0.9
RNF40-212ENST00000602784 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
RNF40-212ENST00000602784 TRBV25-1A0A075B6N4 114 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 SDHAF1A6NFY7 115 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 GAS8-AS1O95177 125 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 SNAPINO95295 136 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 PPBPP02775 128 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 S100PP25815 95 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 PKIAP61925 76 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 LINC00336Q6ZUF6 198 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 ST20Q9HBF5 79 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.9
RNF40-212ENST00000602784 TRBV24-1A0A075B6N3 115 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 IGHV1-24A0A0C4DH33 117 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 RTL8CO15255 209 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 NCR2O95944 276 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 RPS10P46783 165 aaKnown RBP9.39□□□□□ -0.91
RNF40-212ENST00000602784 COTL1Q14019 142 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 NRACQ8N912 160 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 TMEM70Q9BUB7 260 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 URGCP-MRPS24S4R325 110 aa9.39□□□□□ -0.91
RNF40-212ENST00000602784 TRBV27A0A0K0K1C4 114 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 IBA57-AS1B1ANH7 110 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 I3L3M4 83 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 CKS2P33552 79 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
RNF40-212ENST00000602784 LAGE3Q14657 143 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 NFE4Q86UQ8 179 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 SLC7A5P1Q8MH63 180 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 C20orf78Q9BR46 151 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
RNF40-212ENST00000602784 A0A087WX48 190 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 SMKR1H3BMG3 65 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 PHOX2AO14813 284 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 IGHV3-30P01768 117 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 IGHV3-33P01772 117 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 IGHV3-30-3P0DP02 117 aa9.37□□□□□ -0.91
RNF40-212ENST00000602784 IGHV3-30-5P0DP03 117 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms