RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 TWIST1Q15672 202 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 FAM74A3Q4VXF1 159 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 CT83Q5H943 113 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 Q8N3U1 123 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 SMDT1Q9H4I9 107 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 OSTCQ9NRP0 149 aa11.26□□□□□ -0.61
SSBP4-213ENST00000602088 FOXA3P55318 350 aaPredicted RBP11.25□□□□□ -0.61
SSBP4-213ENST00000602088 TMEM241Q24JQ0 296 aa11.25□□□□□ -0.61
SSBP4-213ENST00000602088 SUMO4Q6EEV6 95 aa11.25□□□□□ -0.61
SSBP4-213ENST00000602088 DPH3P1Q9H4G8 78 aa11.25□□□□□ -0.61
SSBP4-213ENST00000602088 H7C1H1 209 aa11.24□□□□□ -0.61
SSBP4-213ENST00000602088 NIT1Q86X76 327 aa11.24□□□□□ -0.61
SSBP4-213ENST00000602088 TRBV6-8A0A0A6YYG3 113 aa11.23□□□□□ -0.61
SSBP4-213ENST00000602088 LAGE3Q14657 143 aa11.23□□□□□ -0.61
SSBP4-213ENST00000602088 DAZ4Q86SG3 579 aaKnown RBP11.23□□□□□ -0.61
SSBP4-213ENST00000602088 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.23□□□□□ -0.61
SSBP4-213ENST00000602088 ISOC2Q96AB3 205 aa11.23□□□□□ -0.61
SSBP4-213ENST00000602088 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
SSBP4-213ENST00000602088 DNAJC30Q96LL9 226 aa11.23□□□□□ -0.61
SSBP4-213ENST00000602088 DAZ3Q9NR90 486 aaKnown RBP11.23□□□□□ -0.61
SSBP4-213ENST00000602088 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
SSBP4-213ENST00000602088 KIAA1109Q2LD37 5005 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 RASL11AQ6T310 242 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 SPATA12Q7Z6I5 190 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 TSKUQ8WUA8 353 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 GFRA4Q9GZZ7 299 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 Q9HAA7 133 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 NAT8Q9UHE5 227 aa11.22□□□□□ -0.61
SSBP4-213ENST00000602088 FAM231BA6NCW3 169 aa11.21□□□□□ -0.61
SSBP4-213ENST00000602088 KRTAP10-2P60368 255 aa11.21□□□□□ -0.61
SSBP4-213ENST00000602088 NTM-AS1Q6ZSK4 140 aa11.21□□□□□ -0.61
SSBP4-213ENST00000602088 C15orf54Q8N8G6 183 aa11.21□□□□□ -0.61
SSBP4-213ENST00000602088 URGCP-MRPS24S4R325 110 aa11.21□□□□□ -0.61
SSBP4-213ENST00000602088 V9GYV3 84 aa11.21□□□□□ -0.61
SSBP4-213ENST00000602088 HIGD1CA8MV81 97 aa11.2□□□□□ -0.62
SSBP4-213ENST00000602088 TMEM97Q5BJF2 176 aa11.2□□□□□ -0.62
SSBP4-213ENST00000602088 SMIM15Q7Z3B0 74 aa11.2□□□□□ -0.62
SSBP4-213ENST00000602088 CHCHD7Q9BUK0 85 aa11.2□□□□□ -0.62
SSBP4-213ENST00000602088 NIT2Q9NQR4 276 aa11.2□□□□□ -0.62
SSBP4-213ENST00000602088 A0A087WTM6 91 aa11.19□□□□□ -0.62
SSBP4-213ENST00000602088 A0A087WX48 190 aa11.19□□□□□ -0.62
SSBP4-213ENST00000602088 C16orf90A8MZG2 172 aa11.19□□□□□ -0.62
SSBP4-213ENST00000602088 EREGO14944 169 aa11.19□□□□□ -0.62
SSBP4-213ENST00000602088 RAB14P61106 215 aa11.19□□□□□ -0.62
SSBP4-213ENST00000602088 ADIRFQ15847 76 aa11.19□□□□□ -0.62
SSBP4-213ENST00000602088 TRAV8-3A0A0A6YYJ7 113 aa11.18□□□□□ -0.62
SSBP4-213ENST00000602088 A0A1B0GUT8 65 aa11.18□□□□□ -0.62
SSBP4-213ENST00000602088 PSCAO43653 123 aa11.18□□□□□ -0.62
SSBP4-213ENST00000602088 GATD1Q8NB37 220 aa11.18□□□□□ -0.62
SSBP4-213ENST00000602088 FRZBQ92765 325 aa11.18□□□□□ -0.62
SSBP4-213ENST00000602088 BORCS7Q96B45 105 aa11.18□□□□□ -0.62
SSBP4-213ENST00000602088 TMEM262E9PQX1 116 aa11.17□□□□□ -0.62
SSBP4-213ENST00000602088 PGPEP1Q9NXJ5 209 aa11.17□□□□□ -0.62
SSBP4-213ENST00000602088 KLK12Q9UKR0 248 aa11.17□□□□□ -0.62
SSBP4-213ENST00000602088 HERC2O95714 4834 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 TRAV26-2A0A0B4J265 109 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 ELOBQ15370 118 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 KCNIP4Q6PIL6 250 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 NUP35Q8NFH5 326 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 CHCHD5Q9BSY4 110 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 TM2D2Q9BX73 214 aa11.16□□□□□ -0.62
SSBP4-213ENST00000602088 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.62
SSBP4-213ENST00000602088 LRCOL1A6NCL2 159 aa11.15□□□□□ -0.62
SSBP4-213ENST00000602088 PKIAP61925 76 aa11.15□□□□□ -0.62
SSBP4-213ENST00000602088 IQCJQ1A5X6 159 aa11.15□□□□□ -0.62
SSBP4-213ENST00000602088 TMEM191AQ9H0A3 160 aa11.15□□□□□ -0.62
SSBP4-213ENST00000602088 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
SSBP4-213ENST00000602088 MPV17L2Q567V2 206 aa11.14□□□□□ -0.63
SSBP4-213ENST00000602088 CLLU1Q5K131 121 aa11.14□□□□□ -0.63
SSBP4-213ENST00000602088 LRP1BQ9NZR2 4599 aa11.14□□□□□ -0.63
SSBP4-213ENST00000602088 SMIM27A0A1W2PRY6 76 aa11.13□□□□□ -0.63
SSBP4-213ENST00000602088 IFITM2Q01629 132 aa11.13□□□□□ -0.63
SSBP4-213ENST00000602088 ATRAIDQ6UW56 229 aa11.13□□□□□ -0.63
SSBP4-213ENST00000602088 UBE2WQ96B02 151 aa11.13□□□□□ -0.63
SSBP4-213ENST00000602088 RPL39LQ96EH5 51 aaKnown RBP11.13□□□□□ -0.63
SSBP4-213ENST00000602088 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
SSBP4-213ENST00000602088 RIGQ13278 110 aa11.12□□□□□ -0.63
SSBP4-213ENST00000602088 CDPF1Q6NVV7 123 aa11.12□□□□□ -0.63
SSBP4-213ENST00000602088 Q8N976 141 aa11.12□□□□□ -0.63
SSBP4-213ENST00000602088 COX11Q9Y6N1 276 aa11.12□□□□□ -0.63
SSBP4-213ENST00000602088 DNAH5Q8TE73 4624 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 FUSP35637 526 aaKnown RBP eCLIP11.11□□□□□ -0.632e-6■■■□□ 17
SSBP4-213ENST00000602088 RBX1P62877 108 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 Q0VG73 95 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 GAGE6Q13070 117 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 ENHOQ6UWT2 76 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 DEFB104AQ8WTQ1 72 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 RMI2Q96E14 147 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 RNF185Q96GF1 192 aa11.11□□□□□ -0.63
SSBP4-213ENST00000602088 ANGP03950 147 aaKnown RBP11.1□□□□□ -0.63
SSBP4-213ENST00000602088 RAB4AP20338 218 aa11.1□□□□□ -0.63
SSBP4-213ENST00000602088 COTL1Q14019 142 aa11.1□□□□□ -0.63
SSBP4-213ENST00000602088 MAPKAPK5-AS1Q8N8E1 139 aa11.1□□□□□ -0.63
SSBP4-213ENST00000602088 TMEM243Q9BU79 118 aa11.1□□□□□ -0.63
SSBP4-213ENST00000602088 IGKV2D-24A0A075B6R9 120 aa11.09□□□□□ -0.63
SSBP4-213ENST00000602088 TRBV6-5A0A0K0K1A5 114 aa11.09□□□□□ -0.63
SSBP4-213ENST00000602088 SDHAF1A6NFY7 115 aa11.09□□□□□ -0.63
SSBP4-213ENST00000602088 CDK2AP2O75956 126 aa11.09□□□□□ -0.63
SSBP4-213ENST00000602088 GAS8-AS1O95177 125 aa11.09□□□□□ -0.63
SSBP4-213ENST00000602088 AMN1Q8IY45 258 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms