RNA–Protein interactions for RNA: ENST00000600358.7

STRN4-218, Transcript of striatin 4, humanhuman

TSL 5

Gene STRN4, Length 1,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-218ENST00000600358 PRELID3AQ96N28 172 aa11.42□□□□□ -0.58
STRN4-218ENST00000600358 ALKBH7Q9BT30 221 aaPredicted RBP11.42□□□□□ -0.58
STRN4-218ENST00000600358 PRSS47A8MTI9 375 aa11.41□□□□□ -0.58
STRN4-218ENST00000600358 PAX4O43316 350 aa11.41□□□□□ -0.58
STRN4-218ENST00000600358 OR10J3Q5JRS4 329 aa11.41□□□□□ -0.58
STRN4-218ENST00000600358 C20orf78Q9BR46 151 aa11.41□□□□□ -0.58
STRN4-218ENST00000600358 TRBV7-3A0A075B6L6 115 aa11.4□□□□□ -0.58
STRN4-218ENST00000600358 TRAV26-1A0A087WT03 109 aa11.4□□□□□ -0.58
STRN4-218ENST00000600358 SMKR1H3BMG3 65 aa11.4□□□□□ -0.58
STRN4-218ENST00000600358 GAS8-AS1O95177 125 aa11.4□□□□□ -0.58
STRN4-218ENST00000600358 TNFRSF6BO95407 300 aa11.4□□□□□ -0.58
STRN4-218ENST00000600358 RPL36AP83881 106 aaKnown RBP11.4□□□□□ -0.58
STRN4-218ENST00000600358 KIAA1644Q3SXP7 199 aa11.4□□□□□ -0.58
STRN4-218ENST00000600358 RPL36ALQ969Q0 106 aaKnown RBP11.4□□□□□ -0.58
STRN4-218ENST00000600358 RPL39LQ96EH5 51 aaKnown RBP11.4□□□□□ -0.58
STRN4-218ENST00000600358 NUPR2A6NF83 97 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 NPYP01303 97 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 P0DMU3 169 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 FAM231AP0DMU4 169 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 FAM231CP0DMU5 169 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 SRIP30626 198 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 UBE2D3P61077 147 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 SUMO2P61956 95 aaKnown RBP11.39□□□□□ -0.59
STRN4-218ENST00000600358 UBE2D2P62837 147 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 SH2D6Q7Z4S9 175 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
STRN4-218ENST00000600358 GYPEP15421 78 aa11.38□□□□□ -0.59
STRN4-218ENST00000600358 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.38□□□□□ -0.59
STRN4-218ENST00000600358 WWC2-AS2Q96NR7 200 aa11.38□□□□□ -0.59
STRN4-218ENST00000600358 MAP1LC3AQ9H492 121 aa11.38□□□□□ -0.59
STRN4-218ENST00000600358 ST20Q9HBF5 79 aa11.38□□□□□ -0.59
STRN4-218ENST00000600358 TNFRSF18Q9Y5U5 241 aa11.38□□□□□ -0.59
STRN4-218ENST00000600358 ICOSQ9Y6W8 199 aa11.38□□□□□ -0.59
STRN4-218ENST00000600358 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
STRN4-218ENST00000600358 POLR2KP53803 58 aaKnown RBP11.37□□□□□ -0.59
STRN4-218ENST00000600358 MRPL23Q16540 153 aaKnown RBP11.37□□□□□ -0.59
STRN4-218ENST00000600358 CEMP1Q6PRD7 247 aaPredicted RBP11.37□□□□□ -0.59
STRN4-218ENST00000600358 TMEM70Q9BUB7 260 aa11.37□□□□□ -0.59
STRN4-218ENST00000600358 Q9UF83 564 aa11.37□□□□□ -0.59
STRN4-218ENST00000600358 A0A0J9YY99 117 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 TRBV27A0A0K0K1C4 114 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 SDHAF1A6NFY7 115 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 TCTAP57738 103 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 DAZ4Q86SG3 579 aaKnown RBP11.36□□□□□ -0.59
STRN4-218ENST00000600358 ZNRF2Q8NHG8 242 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 C18orf32Q8TCD1 76 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 SMIM2Q9BVW6 85 aa11.36□□□□□ -0.59
STRN4-218ENST00000600358 DAZ3Q9NR90 486 aaKnown RBP11.36□□□□□ -0.59
STRN4-218ENST00000600358 CSMD3Q7Z407 3707 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 A0A096LPF7 62 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 GAGE12JA6NER3 117 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 GAGE1Q13065 139 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 GAGE4Q13068 117 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 GAGE5Q13069 117 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 GAGE13Q4V321 117 aa11.35□□□□□ -0.59
STRN4-218ENST00000600358 STARD9Q9P2P6 4700 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 IGLV2-18A0A075B6J9 118 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 K7EMI3 77 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 TCAPO15273 167 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 TIRAPP58753 221 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 Q0VG73 95 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 TMEM97Q5BJF2 176 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 MUC7Q8TAX7 377 aa11.34□□□□□ -0.59
STRN4-218ENST00000600358 NXT2Q9NPJ8 142 aaKnown RBP11.34□□□□□ -0.59
STRN4-218ENST00000600358 KLK5Q9Y337 293 aaPredicted RBP11.34□□□□□ -0.59
STRN4-218ENST00000600358 LINC01546A6NGU7 62 aa11.33□□□□□ -0.6
STRN4-218ENST00000600358 VCYO14598 125 aa11.33□□□□□ -0.6
STRN4-218ENST00000600358 PMCHP20382 165 aa11.33□□□□□ -0.6
STRN4-218ENST00000600358 Q8N8P6 123 aa11.33□□□□□ -0.6
STRN4-218ENST00000600358 I3L3M4 83 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BKO60814 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BJP06899 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BOP23527 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BBP33778 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BDP58876 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BCP62807 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST2H2BEQ16778 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.32□□□□□ -0.6
STRN4-218ENST00000600358 NEGR1Q7Z3B1 354 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 ATP6V0E2Q8NHE4 81 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BHQ93079 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BNQ99877 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 HIST1H2BMQ99879 126 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 GTSF1LQ9H1H1 148 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 TGP01266 2768 aa11.32□□□□□ -0.6
STRN4-218ENST00000600358 RAB5BP61020 215 aa11.31□□□□□ -0.6
STRN4-218ENST00000600358 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
STRN4-218ENST00000600358 PLECQ15149 4684 aaKnown RBP11.31□□□□□ -0.6
STRN4-218ENST00000600358 IGLL5B9A064 214 aa11.3□□□□□ -0.6
STRN4-218ENST00000600358 TSHBP01222 138 aa11.29□□□□□ -0.6
STRN4-218ENST00000600358 COTL1Q14019 142 aa11.29□□□□□ -0.6
STRN4-218ENST00000600358 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
STRN4-218ENST00000600358 APLNQ9ULZ1 77 aa11.29□□□□□ -0.6
STRN4-218ENST00000600358 NUDT3O95989 172 aa11.28□□□□□ -0.6
STRN4-218ENST00000600358 IFI27P40305 119 aaPredicted RBP11.28□□□□□ -0.6
STRN4-218ENST00000600358 COA6Q5JTJ3 125 aaKnown RBP11.28□□□□□ -0.6
STRN4-218ENST00000600358 LOC389332A0A1B0GUA5 103 aa11.27□□□□□ -0.61
STRN4-218ENST00000600358 C3orf84H3BNL1 204 aa11.27□□□□□ -0.61
STRN4-218ENST00000600358 PRSS3P2Q8NHM4 247 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms