RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 DEFB114Q30KQ6 69 aa16.64■□□□□ 0.25
SRRM1-222ENST00000596378 CEND1Q8N111 149 aa16.64■□□□□ 0.25
SRRM1-222ENST00000596378 ACANP16112 2415 aa16.63■□□□□ 0.25
SRRM1-222ENST00000596378 C11orf86A6NJI1 115 aa16.63■□□□□ 0.25
SRRM1-222ENST00000596378 RIPPLY3P57055 190 aa16.63■□□□□ 0.25
SRRM1-222ENST00000596378 PROK1P58294 105 aa16.63■□□□□ 0.25
SRRM1-222ENST00000596378 TRPT1Q86TN4 253 aaKnown RBP16.63■□□□□ 0.25
SRRM1-222ENST00000596378 PRADC1Q9BSG0 188 aa16.63■□□□□ 0.25
SRRM1-222ENST00000596378 A8MTW9 85 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 P0DMU3 169 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 FAM231AP0DMU4 169 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 FAM231CP0DMU5 169 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 OPRPNQ99935 248 aaPredicted RBP16.62■□□□□ 0.25
SRRM1-222ENST00000596378 NIPBLQ6KC79 2804 aaeCLIP16.62■□□□□ 0.25
SRRM1-222ENST00000596378 MYMXA0A1B0GTQ4 84 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 GAGE10A6NGK3 116 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 SMIM13P0DJ93 91 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 TMEM86BQ8N661 226 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 RAX2Q96IS3 184 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 CST9LQ9H4G1 147 aa16.62■□□□□ 0.25
SRRM1-222ENST00000596378 NHP2Q9NX24 153 aaKnown RBP16.62■□□□□ 0.25
SRRM1-222ENST00000596378 PMVKQ15126 192 aa16.61■□□□□ 0.25
SRRM1-222ENST00000596378 TM2D2Q9BX73 214 aa16.61■□□□□ 0.25
SRRM1-222ENST00000596378 E9PLD3 99 aa16.61■□□□□ 0.25
SRRM1-222ENST00000596378 TIMM17AQ99595 171 aa16.6■□□□□ 0.25
SRRM1-222ENST00000596378 ITPR2Q14571 2701 aa16.6■□□□□ 0.25
SRRM1-222ENST00000596378 TRAV2A0A0B4J234 112 aa16.59■□□□□ 0.25
SRRM1-222ENST00000596378 TMEM141Q96I45 108 aa16.59■□□□□ 0.25
SRRM1-222ENST00000596378 HIST1H4GQ99525 98 aa16.59■□□□□ 0.25
SRRM1-222ENST00000596378 NACAE9PAV3 2078 aa16.59■□□□□ 0.25
SRRM1-222ENST00000596378 CD28P10747 220 aa16.58■□□□□ 0.25
SRRM1-222ENST00000596378 A0A1W2PPM0 123 aa16.58■□□□□ 0.24
SRRM1-222ENST00000596378 UFSP1Q6NVU6 142 aa16.58■□□□□ 0.24
SRRM1-222ENST00000596378 ANK3Q12955 4377 aaKnown RBP16.57■□□□□ 0.24
SRRM1-222ENST00000596378 NSUN5P1Q3KNT7 163 aa16.57■□□□□ 0.24
SRRM1-222ENST00000596378 PHLDA1Q8WV24 401 aaPredicted RBP16.57■□□□□ 0.24
SRRM1-222ENST00000596378 Q9UF83 564 aa16.57■□□□□ 0.24
SRRM1-222ENST00000596378 GAGE12BA1L429 117 aa16.57■□□□□ 0.24
SRRM1-222ENST00000596378 FOSL1P15407 271 aa16.57■□□□□ 0.24
SRRM1-222ENST00000596378 ZNRF2Q8NHG8 242 aa16.57■□□□□ 0.24
SRRM1-222ENST00000596378 ZNF815PA8K554 130 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 I3L3M4 83 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 K7EP34 96 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 PLEKHB2Q96CS7 222 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 MTORP42345 2549 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 TRBV7-3A0A075B6L6 115 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 LINC01549A6NIU2 74 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 KRTAP1-1Q07627 177 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 LINC01587Q99440 93 aa16.56■□□□□ 0.24
SRRM1-222ENST00000596378 RHOHQ15669 191 aa16.55■□□□□ 0.24
SRRM1-222ENST00000596378 SAMD5Q5TGI4 173 aa16.55■□□□□ 0.24
SRRM1-222ENST00000596378 SPAG8Q99932 426 aaPredicted RBP16.55■□□□□ 0.24
SRRM1-222ENST00000596378 ODF3L2Q3SX64 289 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 Q6ZSN1 163 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 GTF2H5Q6ZYL4 71 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 M0R2P5 195 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 TAL2Q16559 108 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 TMEM170BQ5T4T1 132 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 C20orf203Q8NBC4 194 aa16.54■□□□□ 0.24
SRRM1-222ENST00000596378 SPCS1Q9Y6A9 102 aa16.53■□□□□ 0.24
SRRM1-222ENST00000596378 ZNF415Q09FC8 603 aa16.53■□□□□ 0.24
SRRM1-222ENST00000596378 SCGB2A2Q13296 93 aa16.53■□□□□ 0.24
SRRM1-222ENST00000596378 CITED2Q99967 270 aaPredicted RBP16.53■□□□□ 0.24
SRRM1-222ENST00000596378 XCL2Q9UBD3 114 aa16.53■□□□□ 0.24
SRRM1-222ENST00000596378 CCL24O00175 119 aa16.52■□□□□ 0.24
SRRM1-222ENST00000596378 C11orf72Q8NBR9 251 aa16.52■□□□□ 0.24
SRRM1-222ENST00000596378 YAE1D1Q9NRH1 226 aa16.52■□□□□ 0.24
SRRM1-222ENST00000596378 MRPL16Q9NX20 251 aaKnown RBP16.52■□□□□ 0.24
SRRM1-222ENST00000596378 TSPEAR-AS2P59090 65 aa16.52■□□□□ 0.23
SRRM1-222ENST00000596378 FHL3Q13643 280 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 SCGB1D4Q6XE38 83 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 TEX29Q8N6K0 151 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 HELZ2Q9BYK8 2649 aaKnown RBP16.51■□□□□ 0.23
SRRM1-222ENST00000596378 INSP01308 110 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 FABP2P12104 132 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 C12orf74Q32Q52 190 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 PAPPA-AS1Q5QFB9 102 aa16.51■□□□□ 0.23
SRRM1-222ENST00000596378 RBX1P62877 108 aa16.5■□□□□ 0.23
SRRM1-222ENST00000596378 CFAP126Q5VTH2 177 aa16.5■□□□□ 0.23
SRRM1-222ENST00000596378 A8MWV9 139 aa16.5■□□□□ 0.23
SRRM1-222ENST00000596378 SETXQ7Z333 2677 aaKnown RBP16.49■□□□□ 0.23
SRRM1-222ENST00000596378 IGHV3OR16-12A0A075B7B8 117 aa16.49■□□□□ 0.23
SRRM1-222ENST00000596378 AZU1P20160 251 aa16.49■□□□□ 0.23
SRRM1-222ENST00000596378 HERVK_113P61574 105 aa16.49■□□□□ 0.23
SRRM1-222ENST00000596378 TNFRSF18Q9Y5U5 241 aa16.48■□□□□ 0.23
SRRM1-222ENST00000596378 IGLV4-3A0A075B6K6 122 aa16.47■□□□□ 0.23
SRRM1-222ENST00000596378 CEMP1Q6PRD7 247 aaPredicted RBP16.47■□□□□ 0.23
SRRM1-222ENST00000596378 LINC01006Q8NI28 216 aa16.47■□□□□ 0.23
SRRM1-222ENST00000596378 EDA2RQ9HAV5 297 aa16.47■□□□□ 0.23
SRRM1-222ENST00000596378 STHQ8IWL8 128 aa16.47■□□□□ 0.23
SRRM1-222ENST00000596378 IGLL5B9A064 214 aa16.46■□□□□ 0.23
SRRM1-222ENST00000596378 OCIAD2Q56VL3 154 aa16.46■□□□□ 0.23
SRRM1-222ENST00000596378 JMJD1CQ15652 2540 aa16.46■□□□□ 0.23
SRRM1-222ENST00000596378 PLA2G2AP14555 144 aa16.46■□□□□ 0.23
SRRM1-222ENST00000596378 RNF151Q2KHN1 245 aa16.46■□□□□ 0.23
SRRM1-222ENST00000596378 NFE4Q86UQ8 179 aa16.45■□□□□ 0.22
SRRM1-222ENST00000596378 FAM104AQ969W3 186 aa16.45■□□□□ 0.22
SRRM1-222ENST00000596378 UNC79Q9P2D8 2635 aa16.44■□□□□ 0.22
SRRM1-222ENST00000596378 IGHV3-64A0A075B6Q5 118 aa16.44■□□□□ 0.22
SRRM1-222ENST00000596378 A0A0J9YXV3 536 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms