RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 NAT8BQ9UHF3 227 aa17.58■□□□□ 0.4
TRIM28-204ENST00000594806 M0QY20 66 aa17.57■□□□□ 0.4
TRIM28-204ENST00000594806 C6orf223Q8N319 242 aa17.57■□□□□ 0.4
TRIM28-204ENST00000594806 IGHV3-38A0A0C4DH36 116 aa17.56■□□□□ 0.4
TRIM28-204ENST00000594806 SUMO4Q6EEV6 95 aa17.56■□□□□ 0.4
TRIM28-204ENST00000594806 SMIM27A0A1W2PRY6 76 aa17.55■□□□□ 0.4
TRIM28-204ENST00000594806 PPP1R2P9O14990 202 aa17.55■□□□□ 0.4
TRIM28-204ENST00000594806 C10orf126Q8N4M7 172 aa17.55■□□□□ 0.4
TRIM28-204ENST00000594806 NUP35Q8NFH5 326 aa17.55■□□□□ 0.4
TRIM28-204ENST00000594806 FRZBQ92765 325 aa17.55■□□□□ 0.4
TRIM28-204ENST00000594806 RTL8CO15255 209 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 RIGQ13278 110 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 TMEM97Q5BJF2 176 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 LINC01556Q5JQF7 62 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 RASL11AQ6T310 242 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 DAZ4Q86SG3 579 aaKnown RBP17.54■□□□□ 0.4
TRIM28-204ENST00000594806 KRTAP1-5Q9BYS1 174 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 DAZ3Q9NR90 486 aaKnown RBP17.54■□□□□ 0.4
TRIM28-204ENST00000594806 TNFRSF18Q9Y5U5 241 aa17.54■□□□□ 0.4
TRIM28-204ENST00000594806 TMEM191AQ9H0A3 160 aa17.52■□□□□ 0.4
TRIM28-204ENST00000594806 NIT2Q9NQR4 276 aa17.52■□□□□ 0.4
TRIM28-204ENST00000594806 TMEM218A2RU14 115 aa17.5■□□□□ 0.39
TRIM28-204ENST00000594806 LINC00862A6NCI5 91 aa17.5■□□□□ 0.39
TRIM28-204ENST00000594806 ANAPC16Q96DE5 110 aa17.5■□□□□ 0.39
TRIM28-204ENST00000594806 DNAH10Q8IVF4 4471 aa17.49■□□□□ 0.39
TRIM28-204ENST00000594806 A0A1B0GW15 77 aa17.49■□□□□ 0.39
TRIM28-204ENST00000594806 MT-ND4LP03901 98 aa17.49■□□□□ 0.39
TRIM28-204ENST00000594806 COMMD7Q86VX2 200 aa17.49■□□□□ 0.39
TRIM28-204ENST00000594806 TRBV6-8A0A0A6YYG3 113 aa17.47■□□□□ 0.39
TRIM28-204ENST00000594806 PRSS29PA6NIE9 313 aa17.47■□□□□ 0.39
TRIM28-204ENST00000594806 NFE4Q86UQ8 179 aa17.47■□□□□ 0.39
TRIM28-204ENST00000594806 F8W036 122 aa17.46■□□□□ 0.39
TRIM28-204ENST00000594806 GATD1Q8NB37 220 aa17.46■□□□□ 0.39
TRIM28-204ENST00000594806 SEC11CQ9BY50 192 aa17.46■□□□□ 0.39
TRIM28-204ENST00000594806 KCNIP4Q6PIL6 250 aa17.45■□□□□ 0.38
TRIM28-204ENST00000594806 CHCHD7Q9BUK0 85 aa17.45■□□□□ 0.38
TRIM28-204ENST00000594806 S100A8P05109 93 aa17.44■□□□□ 0.38
TRIM28-204ENST00000594806 PKIAP61925 76 aa17.44■□□□□ 0.38
TRIM28-204ENST00000594806 URGCP-MRPS24S4R325 110 aa17.44■□□□□ 0.38
TRIM28-204ENST00000594806 IBA57-AS1B1ANH7 110 aa17.43■□□□□ 0.38
TRIM28-204ENST00000594806 NIT1Q86X76 327 aa17.43■□□□□ 0.38
TRIM28-204ENST00000594806 FRAS1Q86XX4 4008 aa17.43■□□□□ 0.38
TRIM28-204ENST00000594806 TRAV26-2A0A0B4J265 109 aa17.42■□□□□ 0.38
TRIM28-204ENST00000594806 ADCYAP1P18509 176 aa17.42■□□□□ 0.38
TRIM28-204ENST00000594806 MRAP2Q96G30 205 aa17.42■□□□□ 0.38
TRIM28-204ENST00000594806 IGHV3-30P01768 117 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 IGHV3-33P01772 117 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 IGHV3-30-3P0DP02 117 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 IGHV3-30-5P0DP03 117 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 RAB4AP20338 218 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 LAGE3Q14657 143 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 DNAH2Q9P225 4427 aa17.41■□□□□ 0.38
TRIM28-204ENST00000594806 TRBV25-1A0A075B6N4 114 aa17.4■□□□□ 0.38
TRIM28-204ENST00000594806 ATP5L2Q7Z4Y8 100 aa17.4■□□□□ 0.38
TRIM28-204ENST00000594806 RNF185Q96GF1 192 aa17.4■□□□□ 0.38
TRIM28-204ENST00000594806 HBBP68871 147 aa17.39■□□□□ 0.37
TRIM28-204ENST00000594806 ELOBQ15370 118 aa17.39■□□□□ 0.37
TRIM28-204ENST00000594806 IQCJQ1A5X6 159 aa17.39■□□□□ 0.37
TRIM28-204ENST00000594806 NTM-AS1Q6ZSK4 140 aa17.39■□□□□ 0.37
TRIM28-204ENST00000594806 AMN1Q8IY45 258 aa17.39■□□□□ 0.37
TRIM28-204ENST00000594806 A0A087WX48 190 aa17.38■□□□□ 0.37
TRIM28-204ENST00000594806 IGHV1-24A0A0C4DH33 117 aa17.38■□□□□ 0.37
TRIM28-204ENST00000594806 TRBV6-5A0A0K0K1A5 114 aa17.38■□□□□ 0.37
TRIM28-204ENST00000594806 PPP1R17O96001 155 aa17.38■□□□□ 0.37
TRIM28-204ENST00000594806 CAMPP49913 170 aa17.38■□□□□ 0.37
TRIM28-204ENST00000594806 DNAH17Q9UFH2 4485 aa17.37■□□□□ 0.37
TRIM28-204ENST00000594806 A0A1B0GXF2 115 aa17.37■□□□□ 0.37
TRIM28-204ENST00000594806 FAM104BQ5XKR9 115 aa17.37■□□□□ 0.37
TRIM28-204ENST00000594806 Q6ZRN7 208 aaPredicted RBP17.37■□□□□ 0.37
TRIM28-204ENST00000594806 RPL39LQ96EH5 51 aaKnown RBP17.37■□□□□ 0.37
TRIM28-204ENST00000594806 CHCHD5Q9BSY4 110 aa17.37■□□□□ 0.37
TRIM28-204ENST00000594806 CTDSP1Q9GZU7 261 aa17.37■□□□□ 0.37
TRIM28-204ENST00000594806 COTL1Q14019 142 aa17.36■□□□□ 0.37
TRIM28-204ENST00000594806 C10orf91Q5T1B1 145 aa17.36■□□□□ 0.37
TRIM28-204ENST00000594806 MRPL54Q6P161 138 aaKnown RBP17.36■□□□□ 0.37
TRIM28-204ENST00000594806 IMMP2LQ96T52 175 aa17.36■□□□□ 0.37
TRIM28-204ENST00000594806 A0A1B0GVY2 172 aa17.35■□□□□ 0.37
TRIM28-204ENST00000594806 TMEM262E9PQX1 116 aa17.35■□□□□ 0.37
TRIM28-204ENST00000594806 TNP2Q05952 138 aa17.35■□□□□ 0.37
TRIM28-204ENST00000594806 TRAV8-3A0A0A6YYJ7 113 aa17.34■□□□□ 0.37
TRIM28-204ENST00000594806 SDHAF1A6NFY7 115 aa17.34■□□□□ 0.37
TRIM28-204ENST00000594806 NCR2O95944 276 aa17.34■□□□□ 0.37
TRIM28-204ENST00000594806 ST20Q9HBF5 79 aa17.34■□□□□ 0.37
TRIM28-204ENST00000594806 CARHSP1Q9Y2V2 147 aaKnown RBP17.33■□□□□ 0.36
TRIM28-204ENST00000594806 Q8N3U1 123 aa17.32■□□□□ 0.36
TRIM28-204ENST00000594806 BTF3L4Q96K17 158 aa17.32■□□□□ 0.36
TRIM28-204ENST00000594806 TMEM243Q9BU79 118 aa17.32■□□□□ 0.36
TRIM28-204ENST00000594806 MRPL51Q4U2R6 128 aaKnown RBP17.31■□□□□ 0.36
TRIM28-204ENST00000594806 FAT2Q9NYQ8 4349 aa17.3■□□□□ 0.36
TRIM28-204ENST00000594806 I3L3M4 83 aa17.3■□□□□ 0.36
TRIM28-204ENST00000594806 TM2D2Q9BX73 214 aa17.3■□□□□ 0.36
TRIM28-204ENST00000594806 TMEM242Q9NWH2 141 aa17.3■□□□□ 0.36
TRIM28-204ENST00000594806 AMTP48728 403 aa17.29■□□□□ 0.36
TRIM28-204ENST00000594806 MPV17L2Q567V2 206 aa17.29■□□□□ 0.36
TRIM28-204ENST00000594806 ATRAIDQ6UW56 229 aa17.29■□□□□ 0.36
TRIM28-204ENST00000594806 TMEM70Q9BUB7 260 aa17.29■□□□□ 0.36
TRIM28-204ENST00000594806 KLK12Q9UKR0 248 aa17.29■□□□□ 0.36
TRIM28-204ENST00000594806 GAS8-AS1O95177 125 aa17.28■□□□□ 0.36
TRIM28-204ENST00000594806 PPBPP02775 128 aa17.28■□□□□ 0.36
TRIM28-204ENST00000594806 PMCHP20382 165 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms