RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 GYPEP15421 78 aa11.05□□□□□ -0.64
CIRBP-241ENST00000593048 DMRTA1Q5VZB9 504 aa11.05□□□□□ -0.64
CIRBP-241ENST00000593048 OR4C5Q8NGB2 326 aa11.05□□□□□ -0.64
CIRBP-241ENST00000593048 FRZBQ92765 325 aa11.05□□□□□ -0.64
CIRBP-241ENST00000593048 K7EQD1 137 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 EREGO14944 169 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 ORM1P02763 201 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 FABP9Q0Z7S8 132 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 TDRG1Q3Y452 100 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 TMEM136Q6ZRR5 245 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 GTSF1Q8WW33 167 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 CNFNQ9BYD5 112 aa11.04□□□□□ -0.64
CIRBP-241ENST00000593048 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
CIRBP-241ENST00000593048 M0R2P5 195 aa11.03□□□□□ -0.64
CIRBP-241ENST00000593048 ZFP82Q8N141 532 aa11.03□□□□□ -0.64
CIRBP-241ENST00000593048 KCNS1Q96KK3 526 aa11.03□□□□□ -0.64
CIRBP-241ENST00000593048 MRPL18Q9H0U6 180 aaKnown RBP11.03□□□□□ -0.64
CIRBP-241ENST00000593048 IGHV3-16A0A0C4DH30 117 aa11.02□□□□□ -0.65
CIRBP-241ENST00000593048 CTRLP40313 264 aa11.02□□□□□ -0.65
CIRBP-241ENST00000593048 DNLZQ5SXM8 178 aa11.02□□□□□ -0.65
CIRBP-241ENST00000593048 NFE4Q86UQ8 179 aa11.02□□□□□ -0.65
CIRBP-241ENST00000593048 APCSP02743 223 aa11.01□□□□□ -0.65
CIRBP-241ENST00000593048 IGLC6P0CF74 106 aa11.01□□□□□ -0.65
CIRBP-241ENST00000593048 EVI2AP22794 236 aa11.01□□□□□ -0.65
CIRBP-241ENST00000593048 ZNF80P51504 273 aaPredicted RBP11.01□□□□□ -0.65
CIRBP-241ENST00000593048 Q0VG73 95 aa11.01□□□□□ -0.65
CIRBP-241ENST00000593048 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
CIRBP-241ENST00000593048 Q6ZRN7 208 aaPredicted RBP11.01□□□□□ -0.65
CIRBP-241ENST00000593048 TNFRSF18Q9Y5U5 241 aa11.01□□□□□ -0.65
CIRBP-241ENST00000593048 SNRPEP62304 92 aaKnown RBP11□□□□□ -0.65
CIRBP-241ENST00000593048 MRPL54Q6P161 138 aaKnown RBP11□□□□□ -0.65
CIRBP-241ENST00000593048 FER1L6-AS1Q8NA97 138 aa11□□□□□ -0.65
CIRBP-241ENST00000593048 PGLYRP4Q96LB8 373 aa11□□□□□ -0.65
CIRBP-241ENST00000593048 PGPEP1Q9NXJ5 209 aa11□□□□□ -0.65
CIRBP-241ENST00000593048 APOBP04114 4563 aaKnown RBP10.99□□□□□ -0.65
CIRBP-241ENST00000593048 OR5AL1P0C617 328 aa10.99□□□□□ -0.65
CIRBP-241ENST00000593048 RAB4BP61018 213 aa10.99□□□□□ -0.65
CIRBP-241ENST00000593048 CACNG7P62955 275 aa10.99□□□□□ -0.65
CIRBP-241ENST00000593048 SH2D6Q7Z4S9 175 aa10.99□□□□□ -0.65
CIRBP-241ENST00000593048 WFDC10BQ8IUB3 73 aa10.99□□□□□ -0.65
CIRBP-241ENST00000593048 SSBP4Q9BWG4 385 aaPredicted RBP10.99□□□□□ -0.65
CIRBP-241ENST00000593048 K7EP13 123 aa10.98□□□□□ -0.65
CIRBP-241ENST00000593048 NDUFA6P56556 154 aa10.98□□□□□ -0.65
CIRBP-241ENST00000593048 PACRGQ96M98 296 aaPredicted RBP10.98□□□□□ -0.65
CIRBP-241ENST00000593048 SCRT2Q9NQ03 307 aa10.98□□□□□ -0.65
CIRBP-241ENST00000593048 LOC100131303A0A0U1RQF7 123 aa10.97□□□□□ -0.65
CIRBP-241ENST00000593048 SNAI2O43623 268 aa10.97□□□□□ -0.65
CIRBP-241ENST00000593048 ESDP10768 282 aa10.97□□□□□ -0.65
CIRBP-241ENST00000593048 ZNF876PQ49A33 203 aa10.97□□□□□ -0.65
CIRBP-241ENST00000593048 Q8N1X5 172 aa10.97□□□□□ -0.65
CIRBP-241ENST00000593048 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
CIRBP-241ENST00000593048 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
CIRBP-241ENST00000593048 CRYGDP07320 174 aa10.96□□□□□ -0.65
CIRBP-241ENST00000593048 LYZL1Q6UWQ5 148 aa10.96□□□□□ -0.65
CIRBP-241ENST00000593048 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.66
CIRBP-241ENST00000593048 DNAH10OSP0CZ25 163 aa10.95□□□□□ -0.66
CIRBP-241ENST00000593048 GATA1P15976 413 aaPredicted RBP10.95□□□□□ -0.66
CIRBP-241ENST00000593048 CAMPP49913 170 aa10.95□□□□□ -0.66
CIRBP-241ENST00000593048 C10orf126Q8N4M7 172 aa10.95□□□□□ -0.66
CIRBP-241ENST00000593048 PRADC1Q9BSG0 188 aa10.95□□□□□ -0.66
CIRBP-241ENST00000593048 TMEM191AQ9H0A3 160 aa10.95□□□□□ -0.66
CIRBP-241ENST00000593048 CIDEAO60543 219 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 PPBPP02775 128 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 ARMS2P0C7Q2 107 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 GZMBP10144 247 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 S100A2P29034 98 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 FUSP35637 526 aaKnown RBP eCLIP10.94□□□□□ -0.66
CIRBP-241ENST00000593048 CDPF1Q6NVV7 123 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 SMIM15Q7Z3B0 74 aa10.94□□□□□ -0.66
CIRBP-241ENST00000593048 A0A087WTM6 91 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 IGHV3-73A0A0B4J1V6 119 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 ASIPP42127 132 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 RHOHQ15669 191 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 CFAP126Q5VTH2 177 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 HIST3H2BBQ8N257 126 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 SLC25A29Q8N8R3 303 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 C11orf21Q9P2W6 132 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 LAMTOR2Q9Y2Q5 125 aa10.93□□□□□ -0.66
CIRBP-241ENST00000593048 TRAV8-6A0A0B4J262 113 aa10.92□□□□□ -0.66
CIRBP-241ENST00000593048 RS1O15537 224 aa10.92□□□□□ -0.66
CIRBP-241ENST00000593048 PSCAO43653 123 aa10.92□□□□□ -0.66
CIRBP-241ENST00000593048 TIRAPP58753 221 aa10.92□□□□□ -0.66
CIRBP-241ENST00000593048 TMEM18Q96B42 140 aa10.92□□□□□ -0.66
CIRBP-241ENST00000593048 ALKBH7Q9BT30 221 aaPredicted RBP10.92□□□□□ -0.66
CIRBP-241ENST00000593048 TMSB15BA0A087X1C1 80 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 TRBV6-4A0A1B0GX49 114 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 NTF3P20783 257 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 S100A4P26447 101 aaKnown RBP10.91□□□□□ -0.66
CIRBP-241ENST00000593048 TWIST1Q15672 202 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 FAM104BQ5XKR9 115 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 BAGE3Q86Y29 109 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 C9orf85Q96MD7 179 aa10.91□□□□□ -0.66
CIRBP-241ENST00000593048 PIK3CD-AS1Q5SR53 167 aa10.9□□□□□ -0.66
CIRBP-241ENST00000593048 TPPP3Q9BW30 176 aa10.9□□□□□ -0.66
CIRBP-241ENST00000593048 LINC01556Q5JQF7 62 aa10.89□□□□□ -0.67
CIRBP-241ENST00000593048 PTH2Q96A98 100 aa10.89□□□□□ -0.67
CIRBP-241ENST00000593048 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
CIRBP-241ENST00000593048 SMIM6P0DI80 62 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms