RNA–Protein interactions for RNA: ENST00000591903.1

SDF2-209, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-209ENST00000591903 RASL11AQ6T310 242 aa7.02□□□□□ -1.29
SDF2-209ENST00000591903 CLRN3Q8NCR9 226 aa7.02□□□□□ -1.29
SDF2-209ENST00000591903 HMCN2Q8NDA2 5059 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 C7orf77A4D0Y5 90 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 APOC3P02656 99 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 SMR3BP02814 79 aaPredicted RBP7.01□□□□□ -1.29
SDF2-209ENST00000591903 CRYGDP07320 174 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 GATA1P15976 413 aaPredicted RBP7.01□□□□□ -1.29
SDF2-209ENST00000591903 NTF3P20783 257 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 RIGQ13278 110 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 KCNIP4Q6PIL6 250 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 SMIM15Q7Z3B0 74 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 GATD1Q8NB37 220 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 NUP35Q8NFH5 326 aa7.01□□□□□ -1.29
SDF2-209ENST00000591903 TRBV10-1A0A0K0K1A3 114 aa7□□□□□ -1.29
SDF2-209ENST00000591903 IGHV3-53P01767 116 aa7□□□□□ -1.29
SDF2-209ENST00000591903 SMIM17P0DL12 118 aa7□□□□□ -1.29
SDF2-209ENST00000591903 LINC00315P59091 139 aa7□□□□□ -1.29
SDF2-209ENST00000591903 RAB4BP61018 213 aa7□□□□□ -1.29
SDF2-209ENST00000591903 FHL2Q14192 279 aa7□□□□□ -1.29
SDF2-209ENST00000591903 Q6ZRN7 208 aaPredicted RBP7□□□□□ -1.29
SDF2-209ENST00000591903 SH2D6Q7Z4S9 175 aa7□□□□□ -1.29
SDF2-209ENST00000591903 SLC7A5P1Q8MH63 180 aa7□□□□□ -1.29
SDF2-209ENST00000591903 ZNF479Q96JC4 524 aa7□□□□□ -1.29
SDF2-209ENST00000591903 PGLYRP4Q96LB8 373 aa7□□□□□ -1.29
SDF2-209ENST00000591903 TPPP3Q9BW30 176 aa7□□□□□ -1.29
SDF2-209ENST00000591903 TMEM191AQ9H0A3 160 aa7□□□□□ -1.29
SDF2-209ENST00000591903 DPH3P1Q9H4G8 78 aa7□□□□□ -1.29
SDF2-209ENST00000591903 KIF25-AS1Q9Y6Z4 181 aa7□□□□□ -1.29
SDF2-209ENST00000591903 TRAV26-1A0A087WT03 109 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 TRGV4A0A0C4DH28 118 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 A0A1B0GXF2 115 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 H7C1H1 209 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 HOXA5P20719 270 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 S100PP25815 95 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 CRYBA4P53673 196 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 KRTAP10-1P60331 282 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 RHOHQ15669 191 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 TWIST1Q15672 202 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 COX19Q49B96 90 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 HHLA3Q9XRX5 114 aa6.99□□□□□ -1.29
SDF2-209ENST00000591903 MRPS16Q9Y3D3 137 aaKnown RBP6.99□□□□□ -1.29
SDF2-209ENST00000591903 HBBP68871 147 aa6.98□□□□□ -1.29
SDF2-209ENST00000591903 PRADC1Q9BSG0 188 aa6.98□□□□□ -1.29
SDF2-209ENST00000591903 K7EQD1 137 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 PAX4O43316 350 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 PPP1R17O96001 155 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 GCSHP23434 173 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 TIRAPP58753 221 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 MRPL23Q16540 153 aaKnown RBP6.97□□□□□ -1.29
SDF2-209ENST00000591903 NFE4Q86UQ8 179 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 RPS10P5Q9NQ39 176 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 PLA2G2DQ9UNK4 145 aa6.97□□□□□ -1.29
SDF2-209ENST00000591903 PLA2G1BP04054 148 aaKnown RBP6.96□□□□□ -1.3
SDF2-209ENST00000591903 EVI2AP22794 236 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 FUSP35637 526 aaKnown RBP eCLIP6.96□□□□□ -1.3
SDF2-209ENST00000591903 ESRGQ1W209 222 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 C14orf178Q8N769 122 aaPredicted RBP6.96□□□□□ -1.3
SDF2-209ENST00000591903 SLC25A29Q8N8R3 303 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 DEFB104AQ8WTQ1 72 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 MRAP2Q96G30 205 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 VSIG2Q96IQ7 327 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 DNAJC30Q96LL9 226 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 TMEM70Q9BUB7 260 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 SAMD10Q9BYL1 202 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 JPT2Q9H910 190 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 MSRB1Q9NZV6 116 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 ICOSQ9Y6W8 199 aa6.96□□□□□ -1.3
SDF2-209ENST00000591903 TRBV24-1A0A075B6N3 115 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 A0A087WWL8 130 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 PPBPP02775 128 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 LINC00694P0DN24 101 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 S100A1P23297 94 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 ZNF56Q15929 161 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 FAM74A4Q5TZK3 123 aa6.95□□□□□ -1.3
SDF2-209ENST00000591903 TRBV7-3A0A075B6L6 115 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 A0A087WTM6 91 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 MUC21A0A0G2JKD1 596 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 MUC21A0A140T8X8 626 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 M0QY20 66 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 SIVA1O15304 175 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 MT-ND6P03923 174 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 RPL36AP83881 106 aaKnown RBP6.94□□□□□ -1.3
SDF2-209ENST00000591903 FAM104BQ5XKR9 115 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.94□□□□□ -1.3
SDF2-209ENST00000591903 RPL36ALQ969Q0 106 aaKnown RBP6.94□□□□□ -1.3
SDF2-209ENST00000591903 SMCO4Q9NRQ5 59 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 LAMTOR2Q9Y2Q5 125 aa6.94□□□□□ -1.3
SDF2-209ENST00000591903 A0A096LPF7 62 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 TRBV6-5A0A0K0K1A5 114 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 PHOX2AO14813 284 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 HLA-DQA1P01909 254 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 GYPEP15421 78 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 RAB4AP20338 218 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 SRIP30626 198 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 TMEM97Q5BJF2 176 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 MRPL54Q6P161 138 aaKnown RBP6.93□□□□□ -1.3
SDF2-209ENST00000591903 NEGR1Q7Z3B1 354 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 GNB1LQ9BYB4 327 aa6.93□□□□□ -1.3
SDF2-209ENST00000591903 NIT2Q9NQR4 276 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms