RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SNAI2O43623 268 aa8.72□□□□□ -1.01
CLPTM1-208ENST00000588274 ZNF56Q15929 161 aa8.72□□□□□ -1.01
CLPTM1-208ENST00000588274 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
CLPTM1-208ENST00000588274 ALG5Q9Y673 324 aa8.72□□□□□ -1.01
CLPTM1-208ENST00000588274 A0A087WYN8 130 aa8.71□□□□□ -1.02
CLPTM1-208ENST00000588274 CXCL1P09341 107 aa8.71□□□□□ -1.02
CLPTM1-208ENST00000588274 NKX6-2Q9C056 277 aaPredicted RBP8.71□□□□□ -1.02
CLPTM1-208ENST00000588274 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
CLPTM1-208ENST00000588274 PKIAP61925 76 aa8.7□□□□□ -1.02
CLPTM1-208ENST00000588274 IQCJQ1A5X6 159 aa8.7□□□□□ -1.02
CLPTM1-208ENST00000588274 C20orf203Q8NBC4 194 aa8.7□□□□□ -1.02
CLPTM1-208ENST00000588274 CLRN3Q8NCR9 226 aa8.7□□□□□ -1.02
CLPTM1-208ENST00000588274 PLAC8Q9NZF1 115 aa8.7□□□□□ -1.02
CLPTM1-208ENST00000588274 IGLV10-54A0A075B6I4 117 aa8.69□□□□□ -1.02
CLPTM1-208ENST00000588274 REG3AQ06141 175 aa8.69□□□□□ -1.02
CLPTM1-208ENST00000588274 GAGE6Q13070 117 aa8.69□□□□□ -1.02
CLPTM1-208ENST00000588274 RNF185Q96GF1 192 aa8.69□□□□□ -1.02
CLPTM1-208ENST00000588274 MLST8Q9BVC4 326 aa8.69□□□□□ -1.02
CLPTM1-208ENST00000588274 MUC21A0A0G2JKD1 596 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 MUC21A0A140T8X8 626 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 G3V3Q6 166 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 PHOX2AO14813 284 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 OR5AL1P0C617 328 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 FHITP49789 147 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 UBE2G1P62253 170 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 LINC01600Q96MT4 127 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 TCEAL7Q9BRU2 100 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 DERL1Q9BUN8 251 aa8.68□□□□□ -1.02
CLPTM1-208ENST00000588274 IGLV4-60A0A075B6I1 120 aa8.67□□□□□ -1.02
CLPTM1-208ENST00000588274 MAP1LC3B2A6NCE7 125 aa8.67□□□□□ -1.02
CLPTM1-208ENST00000588274 C15orf56Q8N910 161 aa8.67□□□□□ -1.02
CLPTM1-208ENST00000588274 INO80EQ8NBZ0 244 aaPredicted RBP8.67□□□□□ -1.02
CLPTM1-208ENST00000588274 MAP1LC3BQ9GZQ8 125 aa8.67□□□□□ -1.02
CLPTM1-208ENST00000588274 TRBV25-1A0A075B6N4 114 aa8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 IGHV3-64A0A075B6Q5 118 aa8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 hDV102S1A0JD36 115 aa8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 DEFA1P59665 94 aa8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 DEFA3P59666 94 aa8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 TMEM97Q5BJF2 176 aa8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 ZNF471Q9BX82 626 aaPredicted RBP8.66□□□□□ -1.02
CLPTM1-208ENST00000588274 LPAP08519 4548 aa8.65□□□□□ -1.02
CLPTM1-208ENST00000588274 M0QY20 66 aa8.65□□□□□ -1.02
CLPTM1-208ENST00000588274 PRR3P79522 188 aaKnown RBP8.65□□□□□ -1.02
CLPTM1-208ENST00000588274 CYTL1Q9NRR1 136 aa8.65□□□□□ -1.02
CLPTM1-208ENST00000588274 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
CLPTM1-208ENST00000588274 IGHV1-24A0A0C4DH33 117 aa8.64□□□□□ -1.03
CLPTM1-208ENST00000588274 A0A1B0GUV1 79 aa8.64□□□□□ -1.03
CLPTM1-208ENST00000588274 P01737 135 aa8.64□□□□□ -1.03
CLPTM1-208ENST00000588274 GIPP09681 153 aaPredicted RBP8.64□□□□□ -1.03
CLPTM1-208ENST00000588274 AKR1C3P42330 323 aa8.64□□□□□ -1.03
CLPTM1-208ENST00000588274 BORCS7-ASMTA0A0B4J1R7 106 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 SCO2A0A1W2PP80 73 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 F5H697 171 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 KRTAP10-8P60410 259 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 AKR1C8PQ5T2L2 129 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 SPANXN1Q5VSR9 72 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
CLPTM1-208ENST00000588274 A0A0J9YXV3 536 aa8.62□□□□□ -1.03
CLPTM1-208ENST00000588274 PAGE4O60829 102 aa8.62□□□□□ -1.03
CLPTM1-208ENST00000588274 IGLC6P0CF74 106 aa8.62□□□□□ -1.03
CLPTM1-208ENST00000588274 CST9LP1Q5W188 147 aa8.62□□□□□ -1.03
CLPTM1-208ENST00000588274 SUMO4Q6EEV6 95 aa8.62□□□□□ -1.03
CLPTM1-208ENST00000588274 FXYD6-FXYD2A0A087WZ82 144 aa8.61□□□□□ -1.03
CLPTM1-208ENST00000588274 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.61□□□□□ -1.03
CLPTM1-208ENST00000588274 COX6A2Q02221 97 aa8.61□□□□□ -1.03
CLPTM1-208ENST00000588274 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.61□□□□□ -1.03
CLPTM1-208ENST00000588274 PRSS3P2Q8NHM4 247 aa8.61□□□□□ -1.03
CLPTM1-208ENST00000588274 STOML3Q8TAV4 291 aa8.61□□□□□ -1.03
CLPTM1-208ENST00000588274 RAB5CP51148 216 aa8.6□□□□□ -1.03
CLPTM1-208ENST00000588274 SSTP61278 116 aa8.6□□□□□ -1.03
CLPTM1-208ENST00000588274 WDR73Q6P4I2 378 aa8.6□□□□□ -1.03
CLPTM1-208ENST00000588274 BAGE2Q86Y30 109 aa8.6□□□□□ -1.03
CLPTM1-208ENST00000588274 PGLYRP4Q96LB8 373 aa8.6□□□□□ -1.03
CLPTM1-208ENST00000588274 MED28Q9H204 178 aa8.6□□□□□ -1.03
CLPTM1-208ENST00000588274 GZMBP10144 247 aa8.59□□□□□ -1.03
CLPTM1-208ENST00000588274 NKX2-5P52952 324 aaPredicted RBP8.59□□□□□ -1.03
CLPTM1-208ENST00000588274 C7orf33Q8WU49 177 aa8.59□□□□□ -1.03
CLPTM1-208ENST00000588274 TMEM243Q9BU79 118 aa8.59□□□□□ -1.03
CLPTM1-208ENST00000588274 AP5S1Q9NUS5 200 aa8.59□□□□□ -1.03
CLPTM1-208ENST00000588274 A0A096LNI7 61 aa8.58□□□□□ -1.04
CLPTM1-208ENST00000588274 S100A9P06702 114 aaKnown RBP8.58□□□□□ -1.04
CLPTM1-208ENST00000588274 MBD3L1Q8WWY6 194 aa8.58□□□□□ -1.04
CLPTM1-208ENST00000588274 MUC2Q02817 5179 aa8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 GAGE12HA6NDE8 117 aa8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 NDUFS6O75380 124 aaKnown RBP8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 MGPP08493 103 aa8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 SRSF9Q13242 221 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 HIGD2BQ4VC39 106 aa8.57□□□□□ -1.04
CLPTM1-208ENST00000588274 IGKV2-24A0A0C4DH68 120 aa8.56□□□□□ -1.04
CLPTM1-208ENST00000588274 C19orf71A6NCJ1 209 aa8.56□□□□□ -1.04
CLPTM1-208ENST00000588274 SMIM17P0DL12 118 aa8.56□□□□□ -1.04
CLPTM1-208ENST00000588274 RPS10P46783 165 aaKnown RBP8.56□□□□□ -1.04
CLPTM1-208ENST00000588274 MAJINQ3KP22 176 aa8.56□□□□□ -1.04
CLPTM1-208ENST00000588274 STPG4Q8N801 248 aa8.56□□□□□ -1.04
CLPTM1-208ENST00000588274 H7C1H1 209 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 GAS8-AS1O95177 125 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 RPL35P42766 123 aaKnown RBP8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 RASL11AQ6T310 242 aa8.55□□□□□ -1.04
CLPTM1-208ENST00000588274 SPINK6Q6UWN8 80 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms