RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	DNAJC30	Q96LL9	226 aa		11.6	□□□□□ -0.55
TCF3-208	ENST00000586318		Q9UF83	564 aa		11.6	□□□□□ -0.55
TCF3-208	ENST00000586318	APLN	Q9ULZ1	77 aa		11.6	□□□□□ -0.55
TCF3-208	ENST00000586318		A0A096LPF7	62 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	GAGE12J	A6NER3	117 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	NUDT3	O95989	172 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	LINC00694	P0DN24	101 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	SRI	P30626	198 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	GAGE1	Q13065	139 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	GAGE4	Q13068	117 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	GAGE5	Q13069	117 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	GAGE13	Q4V321	117 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	CASC10	Q5T4H9	136 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	NIT2	Q9NQR4	276 aa		11.59	□□□□□ -0.55
TCF3-208	ENST00000586318	TRBV7-3	A0A075B6L6	115 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	SMKR1	H3BMG3	65 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	PPBP	P02775	128 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	CKS2	P33552	79 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	SH2D6	Q7Z4S9	175 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	ZNRF2	Q8NHG8	242 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	TNFRSF18	Q9Y5U5	241 aa		11.58	□□□□□ -0.56
TCF3-208	ENST00000586318	COLCA2	A8K830	154 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318		D6R8Y8	96 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	GAS8-AS1	O95177	125 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	NCR2	O95944	276 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	PPP1R17	O96001	155 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	APCS	P02743	223 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	OR10J3	Q5JRS4	329 aa		11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	RPL39L	Q96EH5	51 aa	Known RBP	11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	MRPL18	Q9H0U6	180 aa	Known RBP	11.57	□□□□□ -0.56
TCF3-208	ENST00000586318	TRBV6-5	A0A0K0K1A5	114 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	RPS10	P46783	165 aa	Known RBP	11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	UBE2D3	P61077	147 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	UBE2D2	P62837	147 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	NEGR1	Q7Z3B1	354 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	ORMDL3	Q8N138	153 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	NRAC	Q8N912	160 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	TRAPPC1	Q9Y5R8	145 aa		11.56	□□□□□ -0.56
TCF3-208	ENST00000586318	ATP6V0E2	Q8NHE4	81 aa		11.55	□□□□□ -0.56
TCF3-208	ENST00000586318	PHOX2A	O14813	284 aa		11.54	□□□□□ -0.56
TCF3-208	ENST00000586318	FABP9	Q0Z7S8	132 aa		11.54	□□□□□ -0.56
TCF3-208	ENST00000586318	KIAA1644	Q3SXP7	199 aa		11.54	□□□□□ -0.56
TCF3-208	ENST00000586318	PRELID3A	Q96N28	172 aa		11.54	□□□□□ -0.56
TCF3-208	ENST00000586318	ST20	Q9HBF5	79 aa		11.54	□□□□□ -0.56
TCF3-208	ENST00000586318	LAMTOR2	Q9Y2Q5	125 aa		11.54	□□□□□ -0.56
TCF3-208	ENST00000586318	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.53	□□□□□ -0.56
TCF3-208	ENST00000586318	TNFRSF6B	O95407	300 aa		11.53	□□□□□ -0.56
TCF3-208	ENST00000586318	RAB5A	P20339	215 aa		11.53	□□□□□ -0.56
TCF3-208	ENST00000586318	DAZ4	Q86SG3	579 aa	Known RBP	11.53	□□□□□ -0.56
TCF3-208	ENST00000586318	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	11.53	□□□□□ -0.56
TCF3-208	ENST00000586318	DAZ3	Q9NR90	486 aa	Known RBP	11.53	□□□□□ -0.56
TCF3-208	ENST00000586318	STARD9	Q9P2P6	4700 aa		11.52	□□□□□ -0.56
TCF3-208	ENST00000586318	NPY	P01303	97 aa		11.52	□□□□□ -0.57
TCF3-208	ENST00000586318	TIRAP	P58753	221 aa		11.52	□□□□□ -0.57
TCF3-208	ENST00000586318	C20orf78	Q9BR46	151 aa		11.52	□□□□□ -0.57
TCF3-208	ENST00000586318	SDHAF1	A6NFY7	115 aa		11.51	□□□□□ -0.57
TCF3-208	ENST00000586318	POLR2K	P53803	58 aa	Known RBP	11.51	□□□□□ -0.57
TCF3-208	ENST00000586318	SUMO2	P61956	95 aa	Known RBP	11.51	□□□□□ -0.57
TCF3-208	ENST00000586318	LYPD5	Q6UWN5	251 aa		11.51	□□□□□ -0.57
TCF3-208	ENST00000586318	TMEM70	Q9BUB7	260 aa		11.51	□□□□□ -0.57
TCF3-208	ENST00000586318	GTSF1L	Q9H1H1	148 aa		11.51	□□□□□ -0.57
TCF3-208	ENST00000586318	IGHV3-38	A0A0C4DH36	116 aa		11.5	□□□□□ -0.57
TCF3-208	ENST00000586318	RPL32	P62910	135 aa	Known RBP	11.5	□□□□□ -0.57
TCF3-208	ENST00000586318	ESRG	Q1W209	222 aa		11.5	□□□□□ -0.57
TCF3-208	ENST00000586318	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.5	□□□□□ -0.57
TCF3-208	ENST00000586318	CSMD3	Q7Z407	3707 aa		11.5	□□□□□ -0.57
TCF3-208	ENST00000586318	TRBV27	A0A0K0K1C4	114 aa		11.49	□□□□□ -0.57
TCF3-208	ENST00000586318	PRSS47	A8MTI9	375 aa		11.49	□□□□□ -0.57
TCF3-208	ENST00000586318	CCL18	P55774	89 aa		11.49	□□□□□ -0.57
TCF3-208	ENST00000586318	TMEM97	Q5BJF2	176 aa		11.49	□□□□□ -0.57
TCF3-208	ENST00000586318	VCY	O14598	125 aa		11.48	□□□□□ -0.57
TCF3-208	ENST00000586318	MAP1LC3A	Q9H492	121 aa		11.48	□□□□□ -0.57
TCF3-208	ENST00000586318		I3L3M4	83 aa		11.47	□□□□□ -0.57
TCF3-208	ENST00000586318	TRGC2	P03986	189 aa		11.47	□□□□□ -0.57
TCF3-208	ENST00000586318	PMCH	P20382	165 aa		11.47	□□□□□ -0.57
TCF3-208	ENST00000586318	LELP1	Q5T871	98 aa		11.47	□□□□□ -0.57
TCF3-208	ENST00000586318	SMIM2	Q9BVW6	85 aa		11.47	□□□□□ -0.57
TCF3-208	ENST00000586318	LINC00588	Q9Y4M8	146 aa		11.47	□□□□□ -0.57
TCF3-208	ENST00000586318	COTL1	Q14019	142 aa		11.46	□□□□□ -0.57
TCF3-208	ENST00000586318	MRPS16	Q9Y3D3	137 aa	Known RBP	11.46	□□□□□ -0.57
TCF3-208	ENST00000586318	TRBV6-8	A0A0A6YYG3	113 aa		11.45	□□□□□ -0.58
TCF3-208	ENST00000586318	LGALS9C	Q6DKI2	356 aa		11.45	□□□□□ -0.58
TCF3-208	ENST00000586318	NTM-AS1	Q6ZSK4	140 aa		11.45	□□□□□ -0.58
TCF3-208	ENST00000586318	UBE2DNL	Q8IWF7	75 aa		11.45	□□□□□ -0.58
TCF3-208	ENST00000586318	UPK3B	Q9BT76	320 aa		11.45	□□□□□ -0.58
TCF3-208	ENST00000586318	IGLV2-18	A0A075B6J9	118 aa		11.44	□□□□□ -0.58
TCF3-208	ENST00000586318	LOC389332	A0A1B0GUA5	103 aa		11.44	□□□□□ -0.58
TCF3-208	ENST00000586318	TSHB	P01222	138 aa		11.44	□□□□□ -0.58
TCF3-208	ENST00000586318	KIR2DL4	Q99706	377 aa		11.44	□□□□□ -0.58
TCF3-208	ENST00000586318	PLEC	Q15149	4684 aa	Known RBP	11.44	□□□□□ -0.58
TCF3-208	ENST00000586318	IGHV1-24	A0A0C4DH33	117 aa		11.43	□□□□□ -0.58
TCF3-208	ENST00000586318	TCAP	O15273	167 aa		11.43	□□□□□ -0.58
TCF3-208	ENST00000586318	IQCJ	Q1A5X6	159 aa		11.43	□□□□□ -0.58
TCF3-208	ENST00000586318		Q8N8P6	123 aa		11.43	□□□□□ -0.58
TCF3-208	ENST00000586318	NXT2	Q9NPJ8	142 aa	Known RBP	11.43	□□□□□ -0.58
TCF3-208	ENST00000586318	TRBV25-1	A0A075B6N4	114 aa		11.42	□□□□□ -0.58
TCF3-208	ENST00000586318	TRAV8-6	A0A0B4J262	113 aa		11.42	□□□□□ -0.58
TCF3-208	ENST00000586318	FCER1G	P30273	86 aa		11.42	□□□□□ -0.58
TCF3-208	ENST00000586318	AMT	P48728	403 aa		11.42	□□□□□ -0.58
TCF3-208	ENST00000586318	C18orf32	Q8TCD1	76 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms