RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 DPH3P1Q9H4G8 78 aa10.96□□□□□ -0.65
ERBB2-222ENST00000584908 TNFRSF18Q9Y5U5 241 aa10.96□□□□□ -0.65
ERBB2-222ENST00000584908 H7C1H1 209 aa10.95□□□□□ -0.66
ERBB2-222ENST00000584908 ISOC2Q96AB3 205 aa10.95□□□□□ -0.66
ERBB2-222ENST00000584908 GFRA4Q9GZZ7 299 aa10.95□□□□□ -0.66
ERBB2-222ENST00000584908 DYNC1H1Q14204 4646 aaKnown RBP10.95□□□□□ -0.66
ERBB2-222ENST00000584908 RPL23P62829 140 aaKnown RBP10.94□□□□□ -0.66
ERBB2-222ENST00000584908 LAGE3Q14657 143 aa10.94□□□□□ -0.66
ERBB2-222ENST00000584908 TWIST1Q15672 202 aa10.94□□□□□ -0.66
ERBB2-222ENST00000584908 SUMO4Q6EEV6 95 aa10.94□□□□□ -0.66
ERBB2-222ENST00000584908 TSKUQ8WUA8 353 aa10.94□□□□□ -0.66
ERBB2-222ENST00000584908 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
ERBB2-222ENST00000584908 NAT8Q9UHE5 227 aa10.94□□□□□ -0.66
ERBB2-222ENST00000584908 MGPP08493 103 aa10.93□□□□□ -0.66
ERBB2-222ENST00000584908 DAZ4Q86SG3 579 aaKnown RBP10.93□□□□□ -0.66
ERBB2-222ENST00000584908 NIT1Q86X76 327 aa10.93□□□□□ -0.66
ERBB2-222ENST00000584908 DAZ3Q9NR90 486 aaKnown RBP10.93□□□□□ -0.66
ERBB2-222ENST00000584908 V9GYV3 84 aa10.93□□□□□ -0.66
ERBB2-222ENST00000584908 TRBV6-8A0A0A6YYG3 113 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 IGHV3-30P01768 117 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 IGHV3-33P01772 117 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 IGHV3-30-3P0DP02 117 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 IGHV3-30-5P0DP03 117 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 CHCHD7Q9BUK0 85 aa10.92□□□□□ -0.66
ERBB2-222ENST00000584908 HIGD1CA8MV81 97 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 RAB14P61106 215 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 TMEM97Q5BJF2 176 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 Q8N3U1 123 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.91□□□□□ -0.66
ERBB2-222ENST00000584908 FRZBQ92765 325 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
ERBB2-222ENST00000584908 NIT2Q9NQR4 276 aa10.9□□□□□ -0.66
ERBB2-222ENST00000584908 KIAA1109Q2LD37 5005 aa10.9□□□□□ -0.66
ERBB2-222ENST00000584908 A0A1B0GUT8 65 aa10.89□□□□□ -0.67
ERBB2-222ENST00000584908 ADIRFQ15847 76 aa10.89□□□□□ -0.67
ERBB2-222ENST00000584908 CLLU1Q5K131 121 aa10.89□□□□□ -0.67
ERBB2-222ENST00000584908 NTM-AS1Q6ZSK4 140 aa10.89□□□□□ -0.67
ERBB2-222ENST00000584908 SMIM15Q7Z3B0 74 aa10.89□□□□□ -0.67
ERBB2-222ENST00000584908 IFITM2Q01629 132 aa10.88□□□□□ -0.67
ERBB2-222ENST00000584908 GATD1Q8NB37 220 aa10.87□□□□□ -0.67
ERBB2-222ENST00000584908 BORCS7Q96B45 105 aa10.87□□□□□ -0.67
ERBB2-222ENST00000584908 URGCP-MRPS24S4R325 110 aa10.87□□□□□ -0.67
ERBB2-222ENST00000584908 A0A087WTM6 91 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 A0A087WX48 190 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 TRAV8-3A0A0A6YYJ7 113 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 KRTAP10-2P60368 255 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 PKIAP61925 76 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 IQCJQ1A5X6 159 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 SPATA12Q7Z6I5 190 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 NUP35Q8NFH5 326 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 TMEM191AQ9H0A3 160 aa10.86□□□□□ -0.67
ERBB2-222ENST00000584908 SMIM27A0A1W2PRY6 76 aa10.85□□□□□ -0.67
ERBB2-222ENST00000584908 ELOBQ15370 118 aa10.85□□□□□ -0.67
ERBB2-222ENST00000584908 Q9HAA7 133 aa10.85□□□□□ -0.67
ERBB2-222ENST00000584908 NAT8BQ9UHF3 227 aa10.85□□□□□ -0.67
ERBB2-222ENST00000584908 HERC2O95714 4834 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 TRBV25-1A0A075B6N4 114 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 TRAV26-2A0A0B4J265 109 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 EREGO14944 169 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 KCNIP4Q6PIL6 250 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 TM2D2Q9BX73 214 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 DNAH5Q8TE73 4624 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 IGHV1-24A0A0C4DH33 117 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 LRCOL1A6NCL2 159 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 C16orf90A8MZG2 172 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 RIGQ13278 110 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 MPV17L2Q567V2 206 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 CHCHD5Q9BSY4 110 aa10.84□□□□□ -0.67
ERBB2-222ENST00000584908 ATRAIDQ6UW56 229 aa10.83□□□□□ -0.68
ERBB2-222ENST00000584908 RNF185Q96GF1 192 aa10.83□□□□□ -0.68
ERBB2-222ENST00000584908 PGPEP1Q9NXJ5 209 aa10.83□□□□□ -0.68
ERBB2-222ENST00000584908 KLK12Q9UKR0 248 aa10.83□□□□□ -0.68
ERBB2-222ENST00000584908 COX11Q9Y6N1 276 aa10.83□□□□□ -0.68
ERBB2-222ENST00000584908 TRBV6-5A0A0K0K1A5 114 aa10.82□□□□□ -0.68
ERBB2-222ENST00000584908 TMEM262E9PQX1 116 aa10.82□□□□□ -0.68
ERBB2-222ENST00000584908 PSCAO43653 123 aa10.82□□□□□ -0.68
ERBB2-222ENST00000584908 PNRC1Q12796 327 aaPredicted RBP10.82□□□□□ -0.68
ERBB2-222ENST00000584908 CDPF1Q6NVV7 123 aa10.82□□□□□ -0.68
ERBB2-222ENST00000584908 RPL39LQ96EH5 51 aaKnown RBP10.82□□□□□ -0.68
ERBB2-222ENST00000584908 A0A1B0GW15 77 aa10.81□□□□□ -0.68
ERBB2-222ENST00000584908 RAB4AP20338 218 aa10.81□□□□□ -0.68
ERBB2-222ENST00000584908 Q0VG73 95 aa10.81□□□□□ -0.68
ERBB2-222ENST00000584908 RMI2Q96E14 147 aa10.81□□□□□ -0.68
ERBB2-222ENST00000584908 MRAP2Q96G30 205 aa10.81□□□□□ -0.68
ERBB2-222ENST00000584908 COTL1Q14019 142 aa10.8□□□□□ -0.68
ERBB2-222ENST00000584908 TMEM243Q9BU79 118 aa10.8□□□□□ -0.68
ERBB2-222ENST00000584908 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 SDHAF1A6NFY7 115 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 PPP1R2P9O14990 202 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 NCR2O95944 276 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 RBX1P62877 108 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 UQCC3Q6UW78 93 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 ENHOQ6UWT2 76 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 AMN1Q8IY45 258 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 Q8N976 141 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 UBE2WQ96B02 151 aa10.79□□□□□ -0.68
ERBB2-222ENST00000584908 PRR34Q9NV39 138 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms