RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 POM121L12Q8N7R1 296 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 OR4C5Q8NGB2 326 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 TMEM263Q8WUH6 116 aaKnown RBP6.76□□□□□ -1.33
SS18-220ENST00000582092 C18orf15Q96N68 181 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 KIF25-AS1Q9Y6Z4 181 aa6.76□□□□□ -1.33
SS18-220ENST00000582092 TRAV9-2A0A087WT02 112 aa6.75□□□□□ -1.33
SS18-220ENST00000582092 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.75□□□□□ -1.33
SS18-220ENST00000582092 APOC4P55056 127 aa6.75□□□□□ -1.33
SS18-220ENST00000582092 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
SS18-220ENST00000582092 LINC00173Q6ZV60 143 aa6.75□□□□□ -1.33
SS18-220ENST00000582092 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
SS18-220ENST00000582092 SCGB3A1Q96QR1 104 aa6.75□□□□□ -1.33
SS18-220ENST00000582092 WFDC10AQ9H1F0 79 aa6.75□□□□□ -1.33
SS18-220ENST00000582092 MRPL16Q9NX20 251 aaKnown RBP6.75□□□□□ -1.33
SS18-220ENST00000582092 SDHAF1A6NFY7 115 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 PRM2P04554 102 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 DDTP30046 118 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 SPATA12Q7Z6I5 190 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 C19orf73Q9NVV2 129 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 CYSLTR1Q9Y271 337 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 MEGF8Q7Z7M0 2845 aa6.74□□□□□ -1.33
SS18-220ENST00000582092 IGLV2-18A0A075B6J9 118 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 TRGV2A0A075B6R0 118 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 TRBV6-5A0A0K0K1A5 114 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 I3L3M4 83 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 M0QY20 66 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 RS1O15537 224 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 CIDEAO60543 219 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 LINC00315P59091 139 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 LGALS9BQ3B8N2 356 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 CFAP126Q5VTH2 177 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 LGALS9CQ6DKI2 356 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 ZFP2Q6ZN57 461 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 C11orf72Q8NBR9 251 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 DNAJC30Q96LL9 226 aa6.73□□□□□ -1.33
SS18-220ENST00000582092 NOP10Q9NPE3 64 aaKnown RBP6.73□□□□□ -1.33
SS18-220ENST00000582092 MUC4Q99102 2169 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 SMIM9A6NGZ8 99 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 K7EIL1 84 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 KRTAP10-11P60412 298 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 RHOHQ15669 191 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 LINC01545Q5VT33 79 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 C2orf66Q6UXQ4 117 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 Q8N976 141 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 TOMM6Q96B49 74 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 MIEN1Q9BRT3 115 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 UQCR10Q9UDW1 63 aa6.72□□□□□ -1.33
SS18-220ENST00000582092 TRAV4A0A0B4J268 109 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 KIR2DL5BA0A0G2JN68 375 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 KIR2DL5BA0A0G2JPC4 375 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 GAGE12BA1L429 117 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 GAGE7O76087 117 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 GAGE12FP0CL80 117 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 GAGE12GP0CL81 117 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 GAGE12IP0CL82 117 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 POLR2KP53803 58 aaKnown RBP6.71□□□□□ -1.34
SS18-220ENST00000582092 EMP1P54849 157 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
SS18-220ENST00000582092 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 KIR2DL5AQ8N109 375 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 KIR2DL5BQ8NHK3 375 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 RNASE8Q8TDE3 154 aaKnown RBP6.71□□□□□ -1.34
SS18-220ENST00000582092 PMCHL2Q9BQD1 86 aa6.71□□□□□ -1.34
SS18-220ENST00000582092 A0A096LNJ9 63 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 TRGV4A0A0C4DH28 118 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 LINC00587B1AMM8 73 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 DPM2O94777 84 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 IGHV3-53P01767 116 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 RPL36AP83881 106 aaKnown RBP6.7□□□□□ -1.34
SS18-220ENST00000582092 SMAGPQ0VAQ4 97 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 ERASQ7Z444 233 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 RPL36ALQ969Q0 106 aaKnown RBP6.7□□□□□ -1.34
SS18-220ENST00000582092 TMEM141Q96I45 108 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 B9D2Q9BPU9 175 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 EDA2RQ9HAV5 297 aa6.7□□□□□ -1.34
SS18-220ENST00000582092 TGP01266 2768 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 hDV102S1A0JD36 115 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 IGKCP01834 107 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 GIG44P09565 113 aaPredicted RBP6.69□□□□□ -1.34
SS18-220ENST00000582092 NHLRC4P0CG21 123 aaPredicted RBP6.69□□□□□ -1.34
SS18-220ENST00000582092 HNRNPA3P51991 378 aaKnown RBP6.69□□□□□ -1.34
SS18-220ENST00000582092 COTL1Q14019 142 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 PAPPA-AS1Q5QFB9 102 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 Q6ZTI0 123 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 TP53TG1Q9Y2A0 90 aa6.69□□□□□ -1.34
SS18-220ENST00000582092 CHTOPQ9Y3Y2 248 aaKnown RBP6.69□□□□□ -1.34
SS18-220ENST00000582092 A0A087WX48 190 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 PLNP26678 52 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 CSNK1G2-AS1Q8NCQ2 148 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 DEFB104AQ8WTQ1 72 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 C14orf144Q96I85 54 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 OVOL2Q9BRP0 275 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 PRADC1Q9BSG0 188 aa6.68□□□□□ -1.34
SS18-220ENST00000582092 TRAV12-1A0A0B4J245 112 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 TRBV10-1A0A0K0K1A3 114 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 K7EQD1 137 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
SS18-220ENST00000582092 MAJINQ3KP22 176 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms