RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PMCHL1Q16048 86 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 LGALS9BQ3B8N2 356 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 Q6ZTI0 123 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 X6R8D5 127 aa9□□□□□ -0.97
SRSF1-204ENST00000581979 CSMD3Q7Z407 3707 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 PRSS47A8MTI9 375 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 EMP1P54849 157 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 SUMO2P61956 95 aaKnown RBP8.99□□□□□ -0.97
SRSF1-204ENST00000581979 Q8N8P6 123 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 OR4C5Q8NGB2 326 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 C20orf78Q9BR46 151 aa8.99□□□□□ -0.97
SRSF1-204ENST00000581979 H7C1H1 209 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 ZFAND6Q6FIF0 208 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 UFSP1Q6NVU6 142 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 OVOL2Q9BRP0 275 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 SMIM2Q9BVW6 85 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 ST20Q9HBF5 79 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 RETNQ9HD89 108 aa8.98□□□□□ -0.97
SRSF1-204ENST00000581979 GAGE12BA1L429 117 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 M0QY20 66 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 GAGE7O76087 117 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 GAGE12FP0CL80 117 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 GAGE12GP0CL81 117 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 GAGE12IP0CL82 117 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 OR11H2Q8NH07 326 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 IGLV2-18A0A075B6J9 118 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 TRAV4A0A0B4J268 109 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 LCE6AA0A183 80 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 ZFP2Q6ZN57 461 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 Q6ZWC4 215 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 NACAE9PAV3 2078 aa8.97□□□□□ -0.97
SRSF1-204ENST00000581979 TRGV2A0A075B6R0 118 aa8.96□□□□□ -0.98
SRSF1-204ENST00000581979 LINC01546A6NGU7 62 aa8.96□□□□□ -0.98
SRSF1-204ENST00000581979 IGHV3-53P01767 116 aa8.96□□□□□ -0.98
SRSF1-204ENST00000581979 RNF183Q96D59 192 aa8.96□□□□□ -0.98
SRSF1-204ENST00000581979 NIT2Q9NQR4 276 aa8.96□□□□□ -0.98
SRSF1-204ENST00000581979 SACSQ9NZJ4 4579 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 TRBV6-5A0A0K0K1A5 114 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 TCAPO15273 167 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 LEPROTL1O95214 131 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 KRTDAPP60985 99 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
SRSF1-204ENST00000581979 HBDP02042 147 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 MIFP14174 115 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 LAGE3Q14657 143 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 RYR2Q92736 4967 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 IGHV4-28A0A0C4DH34 117 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 SDHAF1A6NFY7 115 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 RPL32P62910 135 aaKnown RBP8.94□□□□□ -0.98
SRSF1-204ENST00000581979 PYY3Q5JQD4 70 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 Q6ZSN1 163 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 LINC00518Q8N0U6 118 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 TMEM70Q9BUB7 260 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 HSPB8Q9UJY1 196 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 TNFRSF18Q9Y5U5 241 aa8.94□□□□□ -0.98
SRSF1-204ENST00000581979 A0A096LNJ9 63 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 VCYO14598 125 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 P0DMU3 169 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 FAM231AP0DMU4 169 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 FAM231CP0DMU5 169 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 DEFB130BP0DP73 79 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 DEFB130AP0DP74 79 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 FCER1GP30273 86 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 POLR2KP53803 58 aaKnown RBP8.93□□□□□ -0.98
SRSF1-204ENST00000581979 JOSD1Q15040 202 aaPredicted RBP8.93□□□□□ -0.98
SRSF1-204ENST00000581979 ORMDL2Q53FV1 153 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 NEGR1Q7Z3B1 354 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 C12orf57Q99622 126 aa8.93□□□□□ -0.98
SRSF1-204ENST00000581979 K7EMI3 77 aa8.92□□□□□ -0.98
SRSF1-204ENST00000581979 DEFB4AO15263 64 aa8.92□□□□□ -0.98
SRSF1-204ENST00000581979 CIDEAO60543 219 aa8.92□□□□□ -0.98
SRSF1-204ENST00000581979 SCGB1D1O95968 90 aa8.92□□□□□ -0.98
SRSF1-204ENST00000581979 KIR2DL4Q99706 377 aa8.92□□□□□ -0.98
SRSF1-204ENST00000581979 LYRM9A8MSI8 78 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 NUDT3O95989 172 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 C3orf79P0CE67 100 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 BTF3P20290 206 aaKnown RBP8.91□□□□□ -0.98
SRSF1-204ENST00000581979 FAM222AQ5U5X8 452 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 LINC00173Q6ZV60 143 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 Q8NAQ8 132 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 DNAJC30Q96LL9 226 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 LYSTQ99698 3801 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 TRGV4A0A0C4DH28 118 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 TRBV27A0A0K0K1C4 114 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 K7EQD1 137 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 LINC00612Q8N6U2 182 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 NEXN-AS1Q8NBZ9 246 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 TP53TG1Q9Y2A0 90 aa8.91□□□□□ -0.98
SRSF1-204ENST00000581979 I3L3M4 83 aa8.9□□□□□ -0.98
SRSF1-204ENST00000581979 DEFB104AQ8WTQ1 72 aa8.9□□□□□ -0.98
SRSF1-204ENST00000581979 MAP1LC3CQ9BXW4 147 aa8.9□□□□□ -0.98
SRSF1-204ENST00000581979 DNAH1Q9P2D7 4330 aa8.9□□□□□ -0.98
SRSF1-204ENST00000581979 DKK2Q9UBU2 259 aa8.89□□□□□ -0.99
SRSF1-204ENST00000581979 SLC25A29Q8N8R3 303 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 C18orf15Q96N68 181 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 Q9UF83 564 aa8.88□□□□□ -0.99
SRSF1-204ENST00000581979 TRBV10-1A0A0K0K1A3 114 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms