RNA–Protein interactions for RNA: ENST00000581761.5

MKS1-211, Transcript of Meckel syndrome, type 1, humanhuman

TSL 3

Gene MKS1, Length 812 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-211ENST00000581761 DEFA6Q01524 100 aa10.57□□□□□ -0.72
MKS1-211ENST00000581761 NEGR1Q7Z3B1 354 aa10.57□□□□□ -0.72
MKS1-211ENST00000581761 RNASE8Q8TDE3 154 aaKnown RBP10.57□□□□□ -0.72
MKS1-211ENST00000581761 C18orf15Q96N68 181 aa10.57□□□□□ -0.72
MKS1-211ENST00000581761 LINC00587B1AMM8 73 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 H7C1H1 209 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 RHODO00212 210 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 VCYO14598 125 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 POLR2KP53803 58 aaKnown RBP10.56□□□□□ -0.72
MKS1-211ENST00000581761 SPATA45Q537H7 98 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 LINC01545Q5VT33 79 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 CFAP126Q5VTH2 177 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 UFSP1Q6NVU6 142 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 CSNK1G2-AS1Q8NCQ2 148 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 C16orf74Q96GX8 76 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 NDUFAF3Q9BU61 184 aa10.56□□□□□ -0.72
MKS1-211ENST00000581761 TRGV1A0A0A0MS02 117 aa10.55□□□□□ -0.72
MKS1-211ENST00000581761 SDHAF1A6NFY7 115 aa10.55□□□□□ -0.72
MKS1-211ENST00000581761 RRN3P1Q2M238 152 aa10.55□□□□□ -0.72
MKS1-211ENST00000581761 ZNF705AQ6ZN79 300 aaPredicted RBP10.55□□□□□ -0.72
MKS1-211ENST00000581761 EDA2RQ9HAV5 297 aa10.55□□□□□ -0.72
MKS1-211ENST00000581761 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
MKS1-211ENST00000581761 ATP5LO75964 103 aa10.54□□□□□ -0.72
MKS1-211ENST00000581761 DDTP30046 118 aa10.54□□□□□ -0.72
MKS1-211ENST00000581761 PMCHL2Q9BQD1 86 aa10.54□□□□□ -0.72
MKS1-211ENST00000581761 PRKDCP78527 4128 aaKnown RBP10.53□□□□□ -0.72
MKS1-211ENST00000581761 LGALS9BQ3B8N2 356 aa10.53□□□□□ -0.72
MKS1-211ENST00000581761 LGALS9CQ6DKI2 356 aa10.53□□□□□ -0.72
MKS1-211ENST00000581761 KIR2DL4Q99706 377 aa10.53□□□□□ -0.72
MKS1-211ENST00000581761 MAJINQ3KP22 176 aa10.52□□□□□ -0.73
MKS1-211ENST00000581761 Q6ZTI0 123 aa10.52□□□□□ -0.73
MKS1-211ENST00000581761 OR4C5Q8NGB2 326 aa10.52□□□□□ -0.73
MKS1-211ENST00000581761 TOMM6Q96B49 74 aa10.52□□□□□ -0.73
MKS1-211ENST00000581761 NOP10Q9NPE3 64 aaKnown RBP10.52□□□□□ -0.73
MKS1-211ENST00000581761 TRBV27A0A0K0K1C4 114 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 HSBP1L1C9JCN9 74 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 PRSS1P07477 247 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 P0DMU3 169 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 FAM231AP0DMU4 169 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 FAM231CP0DMU5 169 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 DAZ2Q13117 558 aaKnown RBP10.51□□□□□ -0.73
MKS1-211ENST00000581761 C2orf66Q6UXQ4 117 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 ZFP2Q6ZN57 461 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 Q6ZSN1 163 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 SCGB3A1Q96QR1 104 aa10.51□□□□□ -0.73
MKS1-211ENST00000581761 NOTCH3Q9UM47 2321 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 TRAV4A0A0B4J268 109 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 hDV102S1A0JD36 115 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 PLAC8L1A1L4L8 177 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 G3V4G9 280 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 I3L3M4 83 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 IGHV3-53P01767 116 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 G0S2P27469 103 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 RHOHQ15669 191 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 DEFB104AQ8WTQ1 72 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 TNFRSF18Q9Y5U5 241 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 DNAH3Q8TD57 4116 aa10.5□□□□□ -0.73
MKS1-211ENST00000581761 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.49□□□□□ -0.73
MKS1-211ENST00000581761 APOC4P55056 127 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 OXLD1Q5BKU9 147 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 SAMD5Q5TGI4 173 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 Q6ZN92 141 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 DNAJC30Q96LL9 226 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 OVOL2Q9BRP0 275 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 CYSLTR1Q9Y271 337 aa10.49□□□□□ -0.73
MKS1-211ENST00000581761 GAGE12BA1L429 117 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 GAGE7O76087 117 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 TSHBP01222 138 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 GAGE12FP0CL80 117 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 GAGE12GP0CL81 117 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 GAGE12IP0CL82 117 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 NEXN-AS1Q8NBZ9 246 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 KIR2DL5BQ8NHK3 375 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 MIEN1Q9BRT3 115 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 TP53TG1Q9Y2A0 90 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 NACAE9PAV3 2078 aa10.48□□□□□ -0.73
MKS1-211ENST00000581761 LINC01549A6NIU2 74 aa10.47□□□□□ -0.73
MKS1-211ENST00000581761 ODF1Q14990 250 aa10.47□□□□□ -0.73
MKS1-211ENST00000581761 DKK2Q9UBU2 259 aa10.47□□□□□ -0.73
MKS1-211ENST00000581761 UQCR10Q9UDW1 63 aa10.47□□□□□ -0.73
MKS1-211ENST00000581761 TRGV2A0A075B6R0 118 aa10.46□□□□□ -0.73
MKS1-211ENST00000581761 IGLC3P0DOY3 106 aa10.46□□□□□ -0.73
MKS1-211ENST00000581761 EMP1P54849 157 aa10.46□□□□□ -0.73
MKS1-211ENST00000581761 X6R8D5 127 aa10.46□□□□□ -0.73
MKS1-211ENST00000581761 A0A087WX48 190 aa10.45□□□□□ -0.74
MKS1-211ENST00000581761 SMIM9A6NGZ8 99 aa10.45□□□□□ -0.74
MKS1-211ENST00000581761 KPRPQ5T749 579 aaPredicted RBP10.45□□□□□ -0.74
MKS1-211ENST00000581761 ERASQ7Z444 233 aa10.45□□□□□ -0.74
MKS1-211ENST00000581761 TRAV12-1A0A0B4J245 112 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 K7EQD1 137 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 DPM2O94777 84 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 RPL39P62891 51 aaKnown RBP10.44□□□□□ -0.74
MKS1-211ENST00000581761 DEFB135Q30KP9 77 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 BAALCQ8WXS3 180 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 C14orf144Q96I85 54 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 Q9UF83 564 aa10.44□□□□□ -0.74
MKS1-211ENST00000581761 CIDEAO60543 219 aa10.43□□□□□ -0.74
MKS1-211ENST00000581761 IGKCP01834 107 aa10.43□□□□□ -0.74
MKS1-211ENST00000581761 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms