RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TGIF2-C20orf24A0A0A6YYL0 155 aa9.99□□□□□ -0.81
SKA2-205ENST00000580541 NEGR1Q7Z3B1 354 aa9.99□□□□□ -0.81
SKA2-205ENST00000580541 CBLN2Q8IUK8 224 aa9.99□□□□□ -0.81
SKA2-205ENST00000580541 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
SKA2-205ENST00000580541 APCSP02743 223 aa9.98□□□□□ -0.81
SKA2-205ENST00000580541 MRPL51Q4U2R6 128 aaKnown RBP9.98□□□□□ -0.81
SKA2-205ENST00000580541 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
SKA2-205ENST00000580541 ORMDL3Q8N138 153 aa9.98□□□□□ -0.81
SKA2-205ENST00000580541 OR10J3Q5JRS4 329 aa9.97□□□□□ -0.81
SKA2-205ENST00000580541 CASC10Q5T4H9 136 aa9.97□□□□□ -0.81
SKA2-205ENST00000580541 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
SKA2-205ENST00000580541 ATP6V0E2Q8NHE4 81 aa9.97□□□□□ -0.81
SKA2-205ENST00000580541 ZNRF2Q8NHG8 242 aa9.97□□□□□ -0.81
SKA2-205ENST00000580541 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
SKA2-205ENST00000580541 LAMTOR2Q9Y2Q5 125 aa9.97□□□□□ -0.81
SKA2-205ENST00000580541 TRAPPC1Q9Y5R8 145 aa9.97□□□□□ -0.81
SKA2-205ENST00000580541 TRAV26-2A0A0B4J265 109 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 GAGE12JA6NER3 117 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 PHOX2AO14813 284 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 CCL18P55774 89 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 FABP9Q0Z7S8 132 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 GAGE1Q13065 139 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 GAGE4Q13068 117 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 GAGE5Q13069 117 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 GAGE13Q4V321 117 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 TMEM97Q5BJF2 176 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 NEXN-AS1Q8NBZ9 246 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 ST20Q9HBF5 79 aa9.96□□□□□ -0.82
SKA2-205ENST00000580541 A0A096LPF7 62 aa9.95□□□□□ -0.82
SKA2-205ENST00000580541 TRBV6-5A0A0K0K1A5 114 aa9.95□□□□□ -0.82
SKA2-205ENST00000580541 YPEL4Q96NS1 127 aa9.95□□□□□ -0.82
SKA2-205ENST00000580541 C20orf78Q9BR46 151 aa9.95□□□□□ -0.82
SKA2-205ENST00000580541 MRPL18Q9H0U6 180 aaKnown RBP9.95□□□□□ -0.82
SKA2-205ENST00000580541 APLNQ9ULZ1 77 aa9.95□□□□□ -0.82
SKA2-205ENST00000580541 D6R8Y8 96 aa9.94□□□□□ -0.82
SKA2-205ENST00000580541 P0DMU3 169 aa9.94□□□□□ -0.82
SKA2-205ENST00000580541 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
SKA2-205ENST00000580541 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
SKA2-205ENST00000580541 PRELID3AQ96N28 172 aa9.94□□□□□ -0.82
SKA2-205ENST00000580541 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 VCYO14598 125 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 TCAPO15273 167 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 TIRAPP58753 221 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 UBE2D3P61077 147 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 UBE2D2P62837 147 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 GTSF1LQ9H1H1 148 aa9.93□□□□□ -0.82
SKA2-205ENST00000580541 SCO1O75880 301 aa9.92□□□□□ -0.82
SKA2-205ENST00000580541 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
SKA2-205ENST00000580541 PMCHP20382 165 aa9.92□□□□□ -0.82
SKA2-205ENST00000580541 RPS10P46783 165 aaKnown RBP9.92□□□□□ -0.82
SKA2-205ENST00000580541 SUMO2P61956 95 aaKnown RBP9.92□□□□□ -0.82
SKA2-205ENST00000580541 RPL39LQ96EH5 51 aaKnown RBP9.92□□□□□ -0.82
SKA2-205ENST00000580541 SDHAF1A6NFY7 115 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 COLCA2A8K830 154 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 I3L3M4 83 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 NCR2O95944 276 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 RAB5AP20339 215 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 LYPD5Q6UWN5 251 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 KIR2DL4Q99706 377 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 MAP1LC3AQ9H492 121 aa9.91□□□□□ -0.82
SKA2-205ENST00000580541 TRAV8-6A0A0B4J262 113 aa9.9□□□□□ -0.82
SKA2-205ENST00000580541 LINC00694P0DN24 101 aa9.9□□□□□ -0.82
SKA2-205ENST00000580541 RPL32P62910 135 aaKnown RBP9.9□□□□□ -0.82
SKA2-205ENST00000580541 COTL1Q14019 142 aa9.9□□□□□ -0.82
SKA2-205ENST00000580541 NRACQ8N912 160 aa9.9□□□□□ -0.82
SKA2-205ENST00000580541 Q9UF83 564 aa9.9□□□□□ -0.82
SKA2-205ENST00000580541 TRBV27A0A0K0K1C4 114 aa9.89□□□□□ -0.83
SKA2-205ENST00000580541 POLR2KP53803 58 aaKnown RBP9.89□□□□□ -0.83
SKA2-205ENST00000580541 ESRGQ1W209 222 aa9.89□□□□□ -0.83
SKA2-205ENST00000580541 KIAA1644Q3SXP7 199 aa9.89□□□□□ -0.83
SKA2-205ENST00000580541 LELP1Q5T871 98 aa9.89□□□□□ -0.83
SKA2-205ENST00000580541 TMEM70Q9BUB7 260 aa9.89□□□□□ -0.83
SKA2-205ENST00000580541 DNAH7Q8WXX0 4024 aa9.88□□□□□ -0.83
SKA2-205ENST00000580541 PRSS47A8MTI9 375 aa9.88□□□□□ -0.83
SKA2-205ENST00000580541 PKIAP61925 76 aa9.88□□□□□ -0.83
SKA2-205ENST00000580541 LGALS9CQ6DKI2 356 aa9.88□□□□□ -0.83
SKA2-205ENST00000580541 NXT2Q9NPJ8 142 aaKnown RBP9.88□□□□□ -0.83
SKA2-205ENST00000580541 TRBV25-1A0A075B6N4 114 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 TRBV6-8A0A0A6YYG3 113 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 K7EMI3 77 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 GAS8-AS1O95177 125 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 NPYP01303 97 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 G0S2P27469 103 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 FCER1GP30273 86 aa9.87□□□□□ -0.83
SKA2-205ENST00000580541 ALKBH7Q9BT30 221 aaPredicted RBP9.87□□□□□ -0.83
SKA2-205ENST00000580541 IGHV1-24A0A0C4DH33 117 aa9.86□□□□□ -0.83
SKA2-205ENST00000580541 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
SKA2-205ENST00000580541 PRSS3P2Q8NHM4 247 aa9.86□□□□□ -0.83
SKA2-205ENST00000580541 SMIM2Q9BVW6 85 aa9.86□□□□□ -0.83
SKA2-205ENST00000580541 MRPS16Q9Y3D3 137 aaKnown RBP9.86□□□□□ -0.83
SKA2-205ENST00000580541 LOC389332A0A1B0GUA5 103 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 TRGC2P03986 189 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 RAB5BP61020 215 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 SMAGPQ0VAQ4 97 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 UPK3BQ9BT76 320 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 LINC00588Q9Y4M8 146 aa9.85□□□□□ -0.83
SKA2-205ENST00000580541 UBE2L6O14933 153 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms