RNA–Protein interactions for RNA: ENST00000579838.1

NUP85-213, Transcript of nucleoporin 85, humanhuman

TSL 4

Gene NUP85, Length 373 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-213ENST00000579838 HHLA3Q9XRX5 114 aa3.36□□□□□ -1.87
NUP85-213ENST00000579838 MRPS16Q9Y3D3 137 aaKnown RBP3.36□□□□□ -1.87
NUP85-213ENST00000579838 TSSC4Q9Y5U2 329 aaPredicted RBP3.36□□□□□ -1.87
NUP85-213ENST00000579838 SPTAN1Q13813 2472 aaKnown RBP3.36□□□□□ -1.87
NUP85-213ENST00000579838 MYO9AB2RTY4 2548 aa3.36□□□□□ -1.87
NUP85-213ENST00000579838 CENPEQ02224 2701 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 DOPEY2Q9Y3R5 2298 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 TRGV11A0A075B6L2 103 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 A0A087WX48 190 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 TRBV6-5A0A0K0K1A5 114 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 F5H697 171 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 IGKCP01834 107 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 PRSS1P07477 247 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 HTN1P15515 57 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 RIPPLY3P57055 190 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 RPL32P62910 135 aaKnown RBP3.35□□□□□ -1.87
NUP85-213ENST00000579838 ZNF56Q15929 161 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 ZNF876PQ49A33 203 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 LBHQ53QV2 105 aaPredicted RBP3.35□□□□□ -1.87
NUP85-213ENST00000579838 BVES-AS1Q5T3Y7 98 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 ZFP2Q6ZN57 461 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 BOD1L2Q8IYS8 172 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 NEXN-AS1Q8NBZ9 246 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 ZNF418Q8TF45 676 aaPredicted RBP3.35□□□□□ -1.87
NUP85-213ENST00000579838 FAM104AQ969W3 186 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 OPRPNQ99935 248 aaPredicted RBP3.35□□□□□ -1.87
NUP85-213ENST00000579838 LINC00467Q9BRT7 94 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 XCL2Q9UBD3 114 aa3.35□□□□□ -1.87
NUP85-213ENST00000579838 IGLV4-69A0A075B6H9 119 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 TRAV12-1A0A0B4J245 112 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 TRAV25A0A0B4J276 109 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 SDHAF1A6NFY7 115 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 HSBP1L1C9JCN9 74 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 TAX1BP3O14907 124 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 RS1O15537 224 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 SAP30O75446 220 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 ATP5LO75964 103 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 DPM2O94777 84 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 IGLV1-51P01701 117 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 ZNF25P17030 456 aaPredicted RBP3.34□□□□□ -1.87
NUP85-213ENST00000579838 NMUP48645 174 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 ZNF415Q09FC8 603 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 BEAN1Q3B7T3 259 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 ORMDL2Q53FV1 153 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 CFAP126Q5VTH2 177 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 LINC00482Q8N8I6 264 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 SYT8Q8NBV8 401 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 CLUHP3Q96NS8 147 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 SCGB3A1Q96QR1 104 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 JMJD8Q96S16 334 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 LINC01587Q99440 93 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.87
NUP85-213ENST00000579838 SPG11Q96JI7 2443 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 IGHV3OR16-12A0A075B7B8 117 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 TRBV27A0A0K0K1C4 114 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 PLAC8L1A1L4L8 177 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 PRSS29PA6NIE9 313 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 IGIPA6NJ69 53 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 C11orf86A6NJI1 115 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 OR11H12B2RN74 326 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.33□□□□□ -1.88
NUP85-213ENST00000579838 K7EMI3 77 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 K7EP13 123 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 M0R2P5 195 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 INSP01308 110 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 NPSP0C0P6 89 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 RPL35AP18077 110 aaKnown RBP3.33□□□□□ -1.88
NUP85-213ENST00000579838 EMP1P54849 157 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 COL5A1-AS1Q5SY13 56 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.33□□□□□ -1.88
NUP85-213ENST00000579838 PTH2Q96A98 100 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 TMEM208Q9BTX3 173 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 EDA2RQ9HAV5 297 aa3.33□□□□□ -1.88
NUP85-213ENST00000579838 CSPG4Q6UVK1 2322 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 LRRK2Q5S007 2527 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 FLNAP21333 2647 aaKnown RBP3.32□□□□□ -1.88
NUP85-213ENST00000579838 MAP1AP78559 2803 aaPredicted RBP3.32□□□□□ -1.88
NUP85-213ENST00000579838 IGHV3-38A0A0C4DH36 116 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 F8VRH5 84 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 H7C1H1 209 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 VCYO14598 125 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 DLEU1O43261 78 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 SMCPP49901 116 aaPredicted RBP3.32□□□□□ -1.88
NUP85-213ENST00000579838 TSPEAR-AS2P59090 65 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 TMEM97Q5BJF2 176 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 CEMP1Q6PRD7 247 aaPredicted RBP3.32□□□□□ -1.88
NUP85-213ENST00000579838 Q6ZTI0 123 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 NDUFA11Q86Y39 141 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 STHQ8IWL8 128 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 CSNK1G2-AS1Q8NCQ2 148 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 RNASE8Q8TDE3 154 aaKnown RBP3.32□□□□□ -1.88
NUP85-213ENST00000579838 PHLDA1Q8WV24 401 aaPredicted RBP3.32□□□□□ -1.88
NUP85-213ENST00000579838 PLEKHB2Q96CS7 222 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 ZNF479Q96JC4 524 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 CHCHD7Q9BUK0 85 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 CYSLTR1Q9Y271 337 aa3.32□□□□□ -1.88
NUP85-213ENST00000579838 IGLV4-3A0A075B6K6 122 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 A8MWV9 139 aa3.31□□□□□ -1.88
NUP85-213ENST00000579838 I3L3M4 83 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms