RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
CRLF3-203ENST00000578692 RBFOX3A6NFN3 312 aa10.44□□□□□ -0.74
CRLF3-203ENST00000578692 IGLV2-8P01709 118 aa10.44□□□□□ -0.74
CRLF3-203ENST00000578692 SULT1A2P50226 295 aa10.44□□□□□ -0.74
CRLF3-203ENST00000578692 CENPWQ5EE01 88 aa10.44□□□□□ -0.74
CRLF3-203ENST00000578692 ATRAIDQ6UW56 229 aa10.44□□□□□ -0.74
CRLF3-203ENST00000578692 DNAH8Q96JB1 4490 aa10.44□□□□□ -0.74
CRLF3-203ENST00000578692 RAB19A4D1S5 217 aa10.43□□□□□ -0.74
CRLF3-203ENST00000578692 GZMBP10144 247 aa10.43□□□□□ -0.74
CRLF3-203ENST00000578692 ENHOQ6UWT2 76 aa10.43□□□□□ -0.74
CRLF3-203ENST00000578692 AP1S3Q96PC3 154 aa10.43□□□□□ -0.74
CRLF3-203ENST00000578692 VPS13BQ7Z7G8 4022 aa10.43□□□□□ -0.74
CRLF3-203ENST00000578692 IGLC6P0CF74 106 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 RPS20P60866 119 aaKnown RBP10.42□□□□□ -0.74
CRLF3-203ENST00000578692 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 TMEM97Q5BJF2 176 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 Q6ZSA8 131 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 FER1L6-AS1Q8NA97 138 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 OR2D3Q8NGH3 330 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 SMIM12Q96EX1 92 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 CHCHD5Q9BSY4 110 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 TPPP3Q9BW30 176 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 VAX2Q9UIW0 290 aa10.42□□□□□ -0.74
CRLF3-203ENST00000578692 C19orf71A6NCJ1 209 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 PDE6DO43924 150 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 CRPP02741 224 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
CRLF3-203ENST00000578692 GNG4P50150 75 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 PKIAP61925 76 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 MEF2BQ02080 365 aaPredicted RBP10.41□□□□□ -0.74
CRLF3-203ENST00000578692 LINC01620Q4KN68 170 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 C1orf43Q9BWL3 253 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 MED9Q9NWA0 146 aa10.41□□□□□ -0.74
CRLF3-203ENST00000578692 IFNA1P01562 189 aa10.4□□□□□ -0.74
CRLF3-203ENST00000578692 TCTE3Q8IZS6 198 aa10.4□□□□□ -0.74
CRLF3-203ENST00000578692 XKRY2A2RUG3 117 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 P01737 135 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 MGPP08493 103 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 CACNG7P62955 275 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 SLC51BQ86UW2 128 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 F2Z2F3 143 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 M0QY20 66 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 BIN3Q9NQY0 253 aa10.39□□□□□ -0.75
CRLF3-203ENST00000578692 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
CRLF3-203ENST00000578692 H7C1H1 209 aa10.38□□□□□ -0.75
CRLF3-203ENST00000578692 BCL2P10415 239 aa10.38□□□□□ -0.75
CRLF3-203ENST00000578692 MIAQ16674 131 aa10.38□□□□□ -0.75
CRLF3-203ENST00000578692 C14orf177Q52M58 125 aa10.38□□□□□ -0.75
CRLF3-203ENST00000578692 TRBV20OR9-2A0A075B6H5 130 aa10.37□□□□□ -0.75
CRLF3-203ENST00000578692 PLA2G1BP04054 148 aaKnown RBP10.37□□□□□ -0.75
CRLF3-203ENST00000578692 RBX1P62877 108 aa10.37□□□□□ -0.75
CRLF3-203ENST00000578692 GAGE6Q13070 117 aa10.37□□□□□ -0.75
CRLF3-203ENST00000578692 SUMO4Q6EEV6 95 aa10.37□□□□□ -0.75
CRLF3-203ENST00000578692 LYZL1Q6UWQ5 148 aa10.37□□□□□ -0.75
CRLF3-203ENST00000578692 Q6ZNX1 250 aa10.37□□□□□ -0.75
CRLF3-203ENST00000578692 TRGC1P0CF51 173 aa10.36□□□□□ -0.75
CRLF3-203ENST00000578692 NTF3P20783 257 aa10.36□□□□□ -0.75
CRLF3-203ENST00000578692 TAGLN2P37802 199 aaKnown RBP10.36□□□□□ -0.75
CRLF3-203ENST00000578692 IQCJQ1A5X6 159 aa10.36□□□□□ -0.75
CRLF3-203ENST00000578692 LINC00528Q8N1L1 170 aa10.36□□□□□ -0.75
CRLF3-203ENST00000578692 NUDT10Q8NFP7 164 aa10.36□□□□□ -0.75
CRLF3-203ENST00000578692 NUDT11Q96G61 164 aa10.36□□□□□ -0.75
CRLF3-203ENST00000578692 IGHV1-24A0A0C4DH33 117 aa10.35□□□□□ -0.75
CRLF3-203ENST00000578692 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
CRLF3-203ENST00000578692 SCXQ7RTU7 201 aa10.35□□□□□ -0.75
CRLF3-203ENST00000578692 LINC00269Q8N2A0 174 aa10.35□□□□□ -0.75
CRLF3-203ENST00000578692 C9orf62Q8N4C0 152 aa10.35□□□□□ -0.75
CRLF3-203ENST00000578692 PRR34Q9NV39 138 aa10.35□□□□□ -0.75
CRLF3-203ENST00000578692 SRRM2Q9UQ35 2752 aaKnown RBP10.34□□□□□ -0.75
CRLF3-203ENST00000578692 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
CRLF3-203ENST00000578692 NKX2-5P52952 324 aaPredicted RBP10.34□□□□□ -0.75
CRLF3-203ENST00000578692 WDR73Q6P4I2 378 aa10.34□□□□□ -0.75
CRLF3-203ENST00000578692 CHAC1Q9BUX1 264 aa10.34□□□□□ -0.75
CRLF3-203ENST00000578692 DPH3P1Q9H4G8 78 aa10.34□□□□□ -0.75
CRLF3-203ENST00000578692 USP17L23D6RBM5 183 aa10.33□□□□□ -0.76
CRLF3-203ENST00000578692 CLPSL2Q6UWE3 100 aa10.33□□□□□ -0.76
CRLF3-203ENST00000578692 NIT2Q9NQR4 276 aa10.33□□□□□ -0.76
CRLF3-203ENST00000578692 OCC1Q8TAD7 63 aa10.32□□□□□ -0.76
CRLF3-203ENST00000578692 HERC1Q15751 4861 aa10.31□□□□□ -0.76
CRLF3-203ENST00000578692 REG3AQ06141 175 aa10.31□□□□□ -0.76
CRLF3-203ENST00000578692 TWIST1Q15672 202 aa10.31□□□□□ -0.76
CRLF3-203ENST00000578692 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
CRLF3-203ENST00000578692 CIRBP-AS1Q8TBR5 109 aa10.31□□□□□ -0.76
CRLF3-203ENST00000578692 RNASE7Q9H1E1 156 aaKnown RBP10.31□□□□□ -0.76
CRLF3-203ENST00000578692 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 K7EN84 100 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 PRSS1P07477 247 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 CTRLP40313 264 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 DGAT2L7PQ6IED9 249 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 PGLYRP4Q96LB8 373 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 TMEM243Q9BU79 118 aa10.3□□□□□ -0.76
CRLF3-203ENST00000578692 RPP21Q9H633 154 aaKnown RBP10.3□□□□□ -0.76
CRLF3-203ENST00000578692 FLG2Q5D862 2391 aaPredicted RBP10.3□□□□□ -0.76
CRLF3-203ENST00000578692 C20orf203Q8NBC4 194 aa10.29□□□□□ -0.76
CRLF3-203ENST00000578692 DEFB104AQ8WTQ1 72 aa10.29□□□□□ -0.76
CRLF3-203ENST00000578692 CNFNQ9BYD5 112 aa10.29□□□□□ -0.76
CRLF3-203ENST00000578692 MYCBP2O75592 4640 aa10.28□□□□□ -0.76
CRLF3-203ENST00000578692 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms