RNA–Protein interactions for RNA: ENST00000578208.1

GGA3-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 3

Gene GGA3, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-204ENST00000578208 A0A087WX48 190 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 A8MWL6 223 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 SRP19P09132 144 aaKnown RBP7.83□□□□□ -1.16
GGA3-204ENST00000578208 NTF3P20783 257 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 PKIAP61925 76 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 ELOBQ15370 118 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 BORCS7Q96B45 105 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 DNAJC30Q96LL9 226 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 CHCHD7Q9BUK0 85 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 KIF25-AS1Q9Y6Z4 181 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 PKD1P98161 4303 aa7.83□□□□□ -1.16
GGA3-204ENST00000578208 DNAH11Q96DT5 4516 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 A0A087WTM6 91 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 TRBV6-8A0A0A6YYG3 113 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 TRAV8-3A0A0A6YYJ7 113 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 CT83Q5H943 113 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 SUMO4Q6EEV6 95 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 DAZ4Q86SG3 579 aaKnown RBP7.82□□□□□ -1.16
GGA3-204ENST00000578208 NIT1Q86X76 327 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 RMI2Q96E14 147 aa7.82□□□□□ -1.16
GGA3-204ENST00000578208 DAZ3Q9NR90 486 aaKnown RBP7.82□□□□□ -1.16
GGA3-204ENST00000578208 TMEM262E9PQX1 116 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 KRTAP10-2P60368 255 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 PEA15Q15121 130 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 FAM74A3Q4VXF1 159 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 LINC01551Q86U37 167 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 Q8N3U1 123 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 C15orf54Q8N8G6 183 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 CHCHD5Q9BSY4 110 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 CNFNQ9BYD5 112 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 PGPEP1Q9NXJ5 209 aa7.81□□□□□ -1.16
GGA3-204ENST00000578208 M0QY20 66 aa7.8□□□□□ -1.16
GGA3-204ENST00000578208 CDPF1Q6NVV7 123 aa7.8□□□□□ -1.16
GGA3-204ENST00000578208 PGLYRP4Q96LB8 373 aa7.8□□□□□ -1.16
GGA3-204ENST00000578208 OSTCQ9NRP0 149 aa7.8□□□□□ -1.16
GGA3-204ENST00000578208 COX11Q9Y6N1 276 aa7.8□□□□□ -1.16
GGA3-204ENST00000578208 DYNC1H1Q14204 4646 aaKnown RBP7.8□□□□□ -1.16
GGA3-204ENST00000578208 PKHD1P08F94 4074 aa7.8□□□□□ -1.16
GGA3-204ENST00000578208 TRBV25-1A0A075B6N4 114 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 CRPP02741 224 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 TMEM241Q24JQ0 296 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 GTSF1Q8WW33 167 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 SMDT1Q9H4I9 107 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 NIT2Q9NQR4 276 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 KLK12Q9UKR0 248 aa7.79□□□□□ -1.16
GGA3-204ENST00000578208 IGHV1-24A0A0C4DH33 117 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 RAB14P61106 215 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 Q0VG73 95 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 ADIRFQ15847 76 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 TSKUQ8WUA8 353 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 UBE2WQ96B02 151 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 GFRA4Q9GZZ7 299 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 NAT8Q9UHE5 227 aa7.78□□□□□ -1.16
GGA3-204ENST00000578208 IGKV2D-24A0A075B6R9 120 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 A0A1B0GUT8 65 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 FAM231BA6NCW3 169 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 HIGD1CA8MV81 97 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 CDK2AP2O75956 126 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 FRZBQ92765 325 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 ISOC2Q96AB3 205 aa7.77□□□□□ -1.17
GGA3-204ENST00000578208 ANGP03950 147 aaKnown RBP7.76□□□□□ -1.17
GGA3-204ENST00000578208 FOXA3P55318 350 aaPredicted RBP7.76□□□□□ -1.17
GGA3-204ENST00000578208 RPL23P62829 140 aaKnown RBP7.76□□□□□ -1.17
GGA3-204ENST00000578208 GAGE6Q13070 117 aa7.76□□□□□ -1.17
GGA3-204ENST00000578208 MPV17L2Q567V2 206 aa7.76□□□□□ -1.17
GGA3-204ENST00000578208 NTN5Q8WTR8 489 aaPredicted RBP7.76□□□□□ -1.17
GGA3-204ENST00000578208 IGLV5-52A0A0A0MRZ9 124 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 TRAV26-2A0A0B4J265 109 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 UBE2L6O14933 153 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 COTL1Q14019 142 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 IQCJQ1A5X6 159 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 ATRAIDQ6UW56 229 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 TMEM243Q9BU79 118 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 HERC2O95714 4834 aa7.75□□□□□ -1.17
GGA3-204ENST00000578208 LRCOL1A6NCL2 159 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 C9JQL5 133 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 FUSP35637 526 aaKnown RBP eCLIP7.74□□□□□ -1.17
GGA3-204ENST00000578208 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
GGA3-204ENST00000578208 RIGQ13278 110 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 Q8N814 137 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 GATD1Q8NB37 220 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 C1orf43Q9BWL3 253 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 NAT8BQ9UHF3 227 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 V9GYV3 84 aa7.74□□□□□ -1.17
GGA3-204ENST00000578208 KIAA1109Q2LD37 5005 aa7.73□□□□□ -1.17
GGA3-204ENST00000578208 GCSHP23434 173 aa7.73□□□□□ -1.17
GGA3-204ENST00000578208 AMTP48728 403 aa7.73□□□□□ -1.17
GGA3-204ENST00000578208 RBX1P62877 108 aa7.73□□□□□ -1.17
GGA3-204ENST00000578208 Q8N976 141 aa7.73□□□□□ -1.17
GGA3-204ENST00000578208 TMEM191AQ9H0A3 160 aa7.73□□□□□ -1.17
GGA3-204ENST00000578208 LECT2O14960 151 aa7.72□□□□□ -1.17
GGA3-204ENST00000578208 MIAQ16674 131 aa7.72□□□□□ -1.17
GGA3-204ENST00000578208 NUP35Q8NFH5 326 aa7.72□□□□□ -1.17
GGA3-204ENST00000578208 RPL39LQ96EH5 51 aaKnown RBP7.72□□□□□ -1.17
GGA3-204ENST00000578208 SDHAF1A6NFY7 115 aa7.71□□□□□ -1.18
GGA3-204ENST00000578208 NCR2O95944 276 aa7.71□□□□□ -1.18
GGA3-204ENST00000578208 APCSP02743 223 aa7.71□□□□□ -1.18
GGA3-204ENST00000578208 CLPSL2Q6UWE3 100 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms