RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 RNF126Q9BV68 326 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 DENND4AQ7Z401 1863 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 K7EQG2 157 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 K7ERU9 68 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 SOCS3O14543 225 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 CCL25O15444 150 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 IGKV1-17P01599 117 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 TRBV12-3P01733 135 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 NPSP0C0P6 89 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 IFITM3Q01628 133 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 REG3AQ06141 175 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 MIAQ16674 131 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 MSMPQ1L6U9 139 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 UNQ9165/PRO28630Q6UXU0 137 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 CARD19Q96LW7 228 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 C17orf77Q96MU5 243 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 HELZP42694 1942 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 KIF26AQ9ULI4 1882 aaPredicted RBP2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 IGHV4-4A0A075B6R2 117 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV8-4A0A0B4J246 113 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 ZC2HC1BQ5TFG8 222 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 Q6ZTI0 123 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 FAM19A1Q7Z5A9 133 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 MUC7Q8TAX7 377 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 H0YIZ8 118 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 SYCNQ0VAF6 134 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 EBI3Q14213 229 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 RNASE13Q5GAN3 156 aaKnown RBP2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 MSRB1Q9NZV6 116 aa2.22□□□□□ -2.05
SMCHD1-203ENST00000577880 K7EMI3 77 aa2.21□□□□□ -2.05
SMCHD1-203ENST00000577880 HIST1H4AP62805 103 aaKnown RBP2.21□□□□□ -2.05
SMCHD1-203ENST00000577880 KRTAP24-1Q3LI83 254 aa2.21□□□□□ -2.05
SMCHD1-203ENST00000577880 C22orf34Q6ZV56 151 aa2.21□□□□□ -2.05
SMCHD1-203ENST00000577880 TRAV8-2A0A0B4J237 113 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 IGLV3-1P01715 115 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 SPINK8P0C7L1 97 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 CD300CQ08708 224 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 ARTNQ5T4W7 220 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 UFSP1Q6NVU6 142 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 ZNF524Q96C55 264 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 RITA1Q96K30 269 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 FGF23Q9GZV9 251 aaPredicted RBP2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 RNF222A6NCQ9 220 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 PSMB8P28062 276 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 IL15RAQ13261 267 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 CDSNQ15517 529 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 LINC00269Q8N2A0 174 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 COX7B2Q8TF08 81 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 UBL5Q9BZL1 73 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 WFDC1Q9HC57 220 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 XIRP2A4UGR9 3374 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 OBSL1O75147 1896 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 C3orf84H3BNL1 204 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 H3BQ85 93 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 LECT2O14960 151 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 HAMPP81172 84 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 UTF1Q5T230 341 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 BVES-AS1Q5T3Y7 98 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 FXYD5Q96DB9 178 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 Q9H8V8 135 aa2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 ASH1LQ9NR48 2969 aaKnown RBP2.21□□□□□ -2.06
SMCHD1-203ENST00000577880 PTPRDP23468 1912 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 A0A096LNI7 61 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 WI2-2373I1.2A0A1W2PRP0 233 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 G3V4G9 280 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 AVPP01185 164 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 UBE2D2P62837 147 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C21orf62-AS1Q17RA5 79 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C10orf99Q6UWK7 81 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C2orf82Q6UX34 121 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C1orf229Q6ZS94 237 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 LINC00337Q8N6G1 96 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C14orf144Q96I85 54 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 SIGMAR1Q99720 223 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 POLR3KQ9Y2Y1 108 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 NCOA6Q14686 2063 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 BRI3O95415 125 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 MED14OSP0DP75 135 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 MRPL51Q4U2R6 128 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 Q5BKY6 102 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 LELP1Q5T871 98 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C1orf147Q96MC9 270 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 OPRPNQ99935 248 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 ACANP16112 2415 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 LOC107984640A0A0U1RRK4 108 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 TRBV6-4A0A1B0GX49 114 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 TRACP01848 142 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 KRTAP27-1Q3LI81 207 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 ZNF664Q8N3J9 261 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 CHCHD10Q8WYQ3 142 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 DIRC1Q969H9 104 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 CCDC140Q96MF4 163 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 RETNQ9HD89 108 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 SPCS1Q9Y6A9 102 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 VCANP13611 3396 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 LAMA2P24043 3122 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 TRBV6-1A0A0K0K1D8 114 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 C16orf90A8MZG2 172 aa2.2□□□□□ -2.06
SMCHD1-203ENST00000577880 CHKB-CPT1BH3BT56 60 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms