RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 DERL1Q9BUN8 251 aa8.46□□□□□ -1.06
COPS3-214ENST00000577246 VAX2Q9UIW0 290 aa8.46□□□□□ -1.06
COPS3-214ENST00000577246 TNXBP22105 4242 aa8.46□□□□□ -1.06
COPS3-214ENST00000577246 GAGE6Q13070 117 aa8.45□□□□□ -1.06
COPS3-214ENST00000577246 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
COPS3-214ENST00000577246 WDR73Q6P4I2 378 aa8.45□□□□□ -1.06
COPS3-214ENST00000577246 ZNF471Q9BX82 626 aaPredicted RBP8.45□□□□□ -1.06
COPS3-214ENST00000577246 NDUFA13Q9P0J0 144 aa8.45□□□□□ -1.06
COPS3-214ENST00000577246 KIF25-AS1Q9Y6Z4 181 aa8.45□□□□□ -1.06
COPS3-214ENST00000577246 IGLV10-54A0A075B6I4 117 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 TRBV6-1A0A0K0K1D8 114 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 F5H697 171 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 UBE2G2P60604 165 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 REG3GQ6UW15 175 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 TCEAL7Q9BRU2 100 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 MARVELD1Q9BSK0 173 aa8.44□□□□□ -1.06
COPS3-214ENST00000577246 IGHV1-24A0A0C4DH33 117 aa8.43□□□□□ -1.06
COPS3-214ENST00000577246 A0A0J9YXV3 536 aa8.43□□□□□ -1.06
COPS3-214ENST00000577246 SMIM17P0DL12 118 aa8.43□□□□□ -1.06
COPS3-214ENST00000577246 IQCJQ1A5X6 159 aa8.43□□□□□ -1.06
COPS3-214ENST00000577246 GTSF1Q8WW33 167 aa8.43□□□□□ -1.06
COPS3-214ENST00000577246 CTXND1A0A1B0GTU2 59 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 FAM74A7A6NL05 159 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 UPK1BO75841 260 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 LTAP01374 205 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 CXCL1P09341 107 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 PRR3P79522 188 aaKnown RBP8.42□□□□□ -1.06
COPS3-214ENST00000577246 SPANXN1Q5VSR9 72 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 CFAP161Q6P656 301 aa8.42□□□□□ -1.06
COPS3-214ENST00000577246 SPINK6Q6UWN8 80 aa8.41□□□□□ -1.06
COPS3-214ENST00000577246 OR10AG1Q8NH19 301 aa8.41□□□□□ -1.06
COPS3-214ENST00000577246 AQP10Q96PS8 301 aa8.41□□□□□ -1.06
COPS3-214ENST00000577246 A0A1B0GUV1 79 aa8.4□□□□□ -1.06
COPS3-214ENST00000577246 NDUFS6O75380 124 aaKnown RBP8.4□□□□□ -1.06
COPS3-214ENST00000577246 GAS8-AS1O95177 125 aa8.4□□□□□ -1.06
COPS3-214ENST00000577246 MAJINQ3KP22 176 aa8.4□□□□□ -1.06
COPS3-214ENST00000577246 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
COPS3-214ENST00000577246 PKIGQ9Y2B9 76 aa8.4□□□□□ -1.06
COPS3-214ENST00000577246 H7C1H1 209 aa8.39□□□□□ -1.07
COPS3-214ENST00000577246 SLPIP03973 132 aa8.39□□□□□ -1.07
COPS3-214ENST00000577246 OR5AL1P0C617 328 aa8.39□□□□□ -1.07
COPS3-214ENST00000577246 RPS10P46783 165 aaKnown RBP8.39□□□□□ -1.07
COPS3-214ENST00000577246 COX6A2Q02221 97 aa8.39□□□□□ -1.07
COPS3-214ENST00000577246 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
COPS3-214ENST00000577246 LINC00474Q9P2X8 69 aa8.39□□□□□ -1.07
COPS3-214ENST00000577246 BORCS7-ASMTA0A0B4J1R7 106 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 SNAI2O43623 268 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 AKR1C3P42330 323 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 FHITP49789 147 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 SULT1A2P50226 295 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 KRTAP10-8P60410 259 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 STPG4Q8N801 248 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 C20orf203Q8NBC4 194 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 STOML3Q8TAV4 291 aa8.38□□□□□ -1.07
COPS3-214ENST00000577246 SSBP4Q9BWG4 385 aaPredicted RBP8.38□□□□□ -1.07
COPS3-214ENST00000577246 IGKV2-24A0A0C4DH68 120 aa8.37□□□□□ -1.07
COPS3-214ENST00000577246 UBE2L6O14933 153 aa8.37□□□□□ -1.07
COPS3-214ENST00000577246 S100A9P06702 114 aaKnown RBP8.37□□□□□ -1.07
COPS3-214ENST00000577246 RAB5CP51148 216 aa8.37□□□□□ -1.07
COPS3-214ENST00000577246 DEFA1P59665 94 aa8.37□□□□□ -1.07
COPS3-214ENST00000577246 DEFA3P59666 94 aa8.37□□□□□ -1.07
COPS3-214ENST00000577246 AKR1C8PQ5T2L2 129 aa8.37□□□□□ -1.07
COPS3-214ENST00000577246 CST9LP1Q5W188 147 aa8.36□□□□□ -1.07
COPS3-214ENST00000577246 INO80EQ8NBZ0 244 aaPredicted RBP8.36□□□□□ -1.07
COPS3-214ENST00000577246 IGLV4-60A0A075B6I1 120 aa8.35□□□□□ -1.07
COPS3-214ENST00000577246 MAP1LC3B2A6NCE7 125 aa8.35□□□□□ -1.07
COPS3-214ENST00000577246 ODF1Q14990 250 aa8.35□□□□□ -1.07
COPS3-214ENST00000577246 LYPD6BQ8NI32 183 aa8.35□□□□□ -1.07
COPS3-214ENST00000577246 MAP1LC3BQ9GZQ8 125 aa8.35□□□□□ -1.07
COPS3-214ENST00000577246 MUC21A0A0G2JKD1 596 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 MUC21A0A140T8X8 626 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 M0QY20 66 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 MGPP08493 103 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 SSTP61278 116 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 RPL7L1Q6DKI1 246 aaKnown RBP8.34□□□□□ -1.07
COPS3-214ENST00000577246 Q6ZRP5 223 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 C15orf56Q8N910 161 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 PGLYRP4Q96LB8 373 aa8.34□□□□□ -1.07
COPS3-214ENST00000577246 GAGE12HA6NDE8 117 aa8.33□□□□□ -1.08
COPS3-214ENST00000577246 IFITM3Q01628 133 aa8.33□□□□□ -1.08
COPS3-214ENST00000577246 GFRA4Q9GZZ7 299 aa8.33□□□□□ -1.08
COPS3-214ENST00000577246 NKX2-5P52952 324 aaPredicted RBP8.32□□□□□ -1.08
COPS3-214ENST00000577246 HIGD2BQ4VC39 106 aa8.32□□□□□ -1.08
COPS3-214ENST00000577246 BAGE2Q86Y30 109 aa8.32□□□□□ -1.08
COPS3-214ENST00000577246 GVQW2A0A096LPI5 108 aaPredicted RBP8.31□□□□□ -1.08
COPS3-214ENST00000577246 AMTP48728 403 aa8.31□□□□□ -1.08
COPS3-214ENST00000577246 COTL1Q14019 142 aa8.31□□□□□ -1.08
COPS3-214ENST00000577246 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
COPS3-214ENST00000577246 RASL11AQ6T310 242 aa8.31□□□□□ -1.08
COPS3-214ENST00000577246 MLST8Q9BVC4 326 aa8.31□□□□□ -1.08
COPS3-214ENST00000577246 MED28Q9H204 178 aa8.31□□□□□ -1.08
COPS3-214ENST00000577246 A0A096LNI7 61 aa8.3□□□□□ -1.08
COPS3-214ENST00000577246 FAM231BA6NCW3 169 aa8.3□□□□□ -1.08
COPS3-214ENST00000577246 PFDN1O60925 122 aa8.3□□□□□ -1.08
COPS3-214ENST00000577246 SRSF9Q13242 221 aaKnown RBP eCLIP8.3□□□□□ -1.08
COPS3-214ENST00000577246 TPPP3Q9BW30 176 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms