RNA–Protein interactions for RNA: ENST00000576932.5

TOM1L1-223, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 1 (best)

Gene TOM1L1, Length 1,252 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-223	ENST00000576932	PRR34	Q9NV39	138 aa		5.75	□□□□□ -1.49
TOM1L1-223	ENST00000576932	TRBV6-8	A0A0A6YYG3	113 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	TMEM262	E9PQX1	116 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	TCRA	P04437	139 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	SRSF9	Q13242	221 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	LRRC37A5P	Q49AS3	106 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	SMUG1	Q53HV7	270 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	MPV17L2	Q567V2	206 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932		Q8N9P0	234 aa	Predicted RBP	5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	C5orf17	Q8NAS9	161 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	JPT2	Q9H910	190 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	VAX2	Q9UIW0	290 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	PSG8	Q9UQ74	426 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	HSPB11	Q9Y547	144 aa		5.74	□□□□□ -1.49
TOM1L1-223	ENST00000576932	IGKV3D-20	A0A0C4DH25	116 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	FAM240B	A0A1B0GVZ2	78 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	RAB2A	P61019	212 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	UBE2D3	P61077	147 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	UBE2D2	P62837	147 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	RPL36A	P83881	106 aa	Known RBP	5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	ZFP69	Q49AA0	526 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	SUN5	Q8TC36	379 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	GTSF1	Q8WW33	167 aa		5.73	□□□□□ -1.49
TOM1L1-223	ENST00000576932	TRBV7-3	A0A075B6L6	115 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932		A0A1W2PPV4	95 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	hDV102S1	A0JD36	115 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932		K7EQM0	130 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	ARL14EPL	P0DKL9	152 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	CYCS	P99999	105 aa	Known RBP	5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	FLI1	Q01543	452 aa	Predicted RBP	5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	SCGB1C1	Q8TD33	95 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	PPP1R1C	Q8WVI7	109 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	CCDC32	Q9BV29	185 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	IL36B	Q9NZH7	164 aa		5.72	□□□□□ -1.49
TOM1L1-223	ENST00000576932	FAM231B	A6NCW3	169 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	HMGB3	O15347	200 aa	Known RBP	5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	STAG3L2	P0CL84	134 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	STAG3L3	P0CL85	134 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	GZMB	P10144	247 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	S100A4	P26447	101 aa	Known RBP	5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	H2BFS	P57053	126 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	DNLZ	Q5SXM8	178 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PRNT	Q86SH4	94 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	OR10G8	Q8NGN5	311 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	SMIM3	Q9BZL3	60 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932	WFDC1	Q9HC57	220 aa		5.71	□□□□□ -1.5
TOM1L1-223	ENST00000576932		H3BVH4	76 aa		5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PAGE4	O60829	102 aa		5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	MPC2	O95563	127 aa		5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	RPL12	P30050	165 aa	Known RBP	5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	CDC34	P49427	236 aa	Predicted RBP	5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	SAPCD1	Q5SSQ6	148 aa		5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	ZNF664	Q8N3J9	261 aa		5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	EPDR1	Q9UM22	224 aa		5.7	□□□□□ -1.5
TOM1L1-223	ENST00000576932	IGLV10-54	A0A075B6I4	117 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	TRAV8-4	A0A0B4J246	113 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	FABP5P3	A8MUU1	101 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932		H7C1H1	209 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	NDUFS6	O75380	124 aa	Known RBP	5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PTTG1	O95997	202 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932		P01737	135 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PET100	P0DJ07	73 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	GCHFR	P30047	84 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	TMEM97	Q5BJF2	176 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	FAM74A4	Q5TZK3	123 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	MZT2B	Q6NZ67	158 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932		Q6ZRP5	223 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	LINC00269	Q8N2A0	174 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	SFRP2	Q96HF1	295 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	CHCHD5	Q9BSY4	110 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PSORS1C2	Q9UIG4	136 aa		5.69	□□□□□ -1.5
TOM1L1-223	ENST00000576932		B4DEV8	164 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	ARMS2	P0C7Q2	107 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	COX6A2	Q02221	97 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	MAJIN	Q3KP22	176 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	STPG4	Q8N801	248 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	OR11H4	Q8NGC9	324 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	LINC00474	Q9P2X8	69 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	ARL2-SNX15	V9GYD0	113 aa		5.68	□□□□□ -1.5
TOM1L1-223	ENST00000576932	TRAV34	A0A0B4J273	112 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	KRBOX1	C9JBD0	128 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	IFNA7	P01567	189 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	CRIP1	P50238	77 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	RBX1	P62877	108 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	CLPSL2	Q6UWE3	100 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932		Q86TA4	180 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	TMEM167B	Q9NRX6	74 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PKIG	Q9Y2B9	76 aa		5.67	□□□□□ -1.5
TOM1L1-223	ENST00000576932	IGKV2D-30	A0A075B6S6	120 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	TRAV26-2	A0A0B4J265	109 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932		A0A1W2PRE2	83 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	GRIFIN	A4D1Z8	144 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	CXorf1	O96002	111 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	RPS10	P46783	165 aa	Known RBP	5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	REG3A	Q06141	175 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	COX8C	Q7Z4L0	72 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	ENKUR	Q8TC29	256 aa		5.66	□□□□□ -1.5
TOM1L1-223	ENST00000576932	PSMG3	Q9BT73	122 aa	Predicted RBP	5.66	□□□□□ -1.5

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