RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 BUB3O43684 328 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 IGKV3-20P01619 116 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 LY6DQ14210 128 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 EPG5Q9HCE0 2579 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 LY6LH3BQJ8 138 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 IGF1P05019 195 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 OR13C6PQ8NH95 151 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 TIMM21Q9BVV7 248 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 ICOSQ9Y6W8 199 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 MXRA5Q9NR99 2828 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 COX6B1P14854 86 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 UBE2E1P51965 193 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 SBSPONQ8IVN8 264 aa7.25□□□□□ -1.25
CCDC40-212ENST00000574799 A0A0J9YXV3 536 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 LOC107984640A0A0U1RRK4 108 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 CCL21O00585 134 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 NPFFO15130 113 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 COX8CQ7Z4L0 72 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 LINC00527Q9UJ94 153 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 IGHV1-69DA0A0B4J2H0 117 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 IGHG4P01861 327 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 LY6G5BQ8NDX9 201 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 EEF1AKMT3Q96AZ1 226 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 A0A0B4J2C4 111 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 C19orf84I3L1E1 186 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 ELANEP08246 267 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 P0DMU3 169 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 FAM231AP0DMU4 169 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 FAM231CP0DMU5 169 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 CD28P10747 220 aa7.24□□□□□ -1.25
CCDC40-212ENST00000574799 B9A039 149 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 HERVK_113P63121 156 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 TMEM263Q8WUH6 116 aaKnown RBP7.23□□□□□ -1.25
CCDC40-212ENST00000574799 JPT2Q9H910 190 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 F6UB75 175 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 H3BT86 120 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 J3KT08 172 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 LEPROTO15243 131 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
CCDC40-212ENST00000574799 KLK5Q9Y337 293 aaPredicted RBP7.23□□□□□ -1.25
CCDC40-212ENST00000574799 FASNP49327 2511 aaKnown RBP7.23□□□□□ -1.25
CCDC40-212ENST00000574799 TRAV41A0A0B4J266 112 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 C5orf47Q569G3 176 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 ZNRF2Q8NHG8 242 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 LINC00477Q96M19 166 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 NDUFA12Q9UI09 145 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 CENPEQ02224 2701 aa7.23□□□□□ -1.25
CCDC40-212ENST00000574799 USP9XQ93008 2570 aaPredicted RBP7.23□□□□□ -1.25
CCDC40-212ENST00000574799 RNASE13Q5GAN3 156 aaKnown RBP7.22□□□□□ -1.25
CCDC40-212ENST00000574799 IGLV4-69A0A075B6H9 119 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 ZNF876PQ49A33 203 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 DGAT2L7PQ6IED9 249 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 BRI3O95415 125 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 CRYGDP07320 174 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 UCNP55089 124 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 CIRBPQ14011 172 aaKnown RBP7.22□□□□□ -1.25
CCDC40-212ENST00000574799 C9orf139Q6ZV77 190 aa7.22□□□□□ -1.25
CCDC40-212ENST00000574799 G3V318 75 aa7.21□□□□□ -1.25
CCDC40-212ENST00000574799 H7C423 109 aa7.21□□□□□ -1.25
CCDC40-212ENST00000574799 NDUFA7O95182 113 aa7.21□□□□□ -1.25
CCDC40-212ENST00000574799 PRR9Q5T870 116 aa7.21□□□□□ -1.25
CCDC40-212ENST00000574799 DAND5Q8N907 189 aa7.21□□□□□ -1.25
CCDC40-212ENST00000574799 ZNF625Q96I27 306 aaPredicted RBP7.21□□□□□ -1.25
CCDC40-212ENST00000574799 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.26
CCDC40-212ENST00000574799 C3orf22Q8N5N4 141 aa7.21□□□□□ -1.26
CCDC40-212ENST00000574799 DNAJC30Q96LL9 226 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 TIMM17AQ99595 171 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 CSDC2Q9Y534 153 aaKnown RBP7.2□□□□□ -1.26
CCDC40-212ENST00000574799 A0A0J9YXY3 114 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 TRBV30A0A0K0K1B3 111 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 OVOL1O14753 267 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 UQCRQO14949 82 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 C9orf47Q6ZRZ4 202 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 Q6ZSV7 163 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 MDFICQ9P1T7 246 aa7.2□□□□□ -1.26
CCDC40-212ENST00000574799 F8W735 103 aaPredicted RBP7.2□□□□□ -1.26
CCDC40-212ENST00000574799 ATP6V0E1O15342 81 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 IGHV3-11P01762 117 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 ZFP36P26651 326 aaKnown RBP7.19□□□□□ -1.26
CCDC40-212ENST00000574799 VMO1Q7Z5L0 202 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 ITLN2Q8WWU7 325 aaPredicted RBP7.19□□□□□ -1.26
CCDC40-212ENST00000574799 IGHV3-73A0A0B4J1V6 119 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 TRAV13-1A0A0B4J241 112 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 PSMG3-AS1Q96PY0 264 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 SORL1Q92673 2214 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 IGHV4-4A0A075B6R2 117 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 IGIPA6NJ69 53 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 TRACP01848 142 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 CEMP1Q6PRD7 247 aaPredicted RBP7.19□□□□□ -1.26
CCDC40-212ENST00000574799 ZNF580Q9UK33 172 aa7.19□□□□□ -1.26
CCDC40-212ENST00000574799 SMIM9A6NGZ8 99 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 ODF3BA8MYP8 253 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 DNAL4O96015 105 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 TSHBP01222 138 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 IGHV3-30-3P0DP02 117 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 FAM19A5Q7Z5A7 132 aaPredicted RBP7.18□□□□□ -1.26
CCDC40-212ENST00000574799 C2CD3Q4AC94 2353 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.18□□□□□ -1.264e-7■■■■□ 19.8
CCDC40-212ENST00000574799 CCDC168Q8NDH2 2452 aa7.18□□□□□ -1.26
CCDC40-212ENST00000574799 hADV29S1A0JD25 119 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms