RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 OR2D3Q8NGH3 330 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 DNAJC30Q96LL9 226 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 CHCHD5Q9BSY4 110 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 C1orf43Q9BWL3 253 aa6.39□□□□□ -1.39
NPLOC4-212ENST00000573328 TRAV1-1A0A0B4J248 108 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 XKRY2A2RUG3 117 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 PDE6DO43924 150 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 P01737 135 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 ANGP03950 147 aaKnown RBP6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 RPS20P60866 119 aaKnown RBP6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 PKIAP61925 76 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 Q0VG73 95 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 C15orf54Q8N8G6 183 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 FER1L6-AS1Q8NA97 138 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 SSBP4Q9BWG4 385 aaPredicted RBP6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 MED9Q9NWA0 146 aa6.38□□□□□ -1.39
NPLOC4-212ENST00000573328 SRRM2Q9UQ35 2752 aaKnown RBP6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 RAB19A4D1S5 217 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 H7C1H1 209 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 HLA-DQA1P01909 254 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 BCL2P10415 239 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 MPV17L2Q567V2 206 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 TMEM97Q5BJF2 176 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 SLC51BQ86UW2 128 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 TCTE3Q8IZS6 198 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 Q8N976 141 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 BIN3Q9NQY0 253 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 FAM30AQ9NZY2 134 aa6.37□□□□□ -1.39
NPLOC4-212ENST00000573328 VPS13BQ7Z7G8 4022 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 IGLV2-8P01709 118 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 C1QBP02746 253 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 CACNG7P62955 275 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 LINC01620Q4KN68 170 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 CLPSL2Q6UWE3 100 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 SMIM12Q96EX1 92 aa6.36□□□□□ -1.39
NPLOC4-212ENST00000573328 FAT1Q14517 4588 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 C19orf71A6NCJ1 209 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 TRGC1P0CF51 173 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 IGLC6P0CF74 106 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 GAGE6Q13070 117 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 C14orf177Q52M58 125 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 SUMO4Q6EEV6 95 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 VAX2Q9UIW0 290 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 KIF25-AS1Q9Y6Z4 181 aa6.35□□□□□ -1.39
NPLOC4-212ENST00000573328 hCG_2014768A0A024R1R8 64 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 TRBV20OR9-2A0A075B6H5 130 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 IGHV1-24A0A0C4DH33 117 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 F2Z2F3 143 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 TAGLN2P37802 199 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 ATRAIDQ6UW56 229 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 LYZL1Q6UWQ5 148 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 ENHOQ6UWT2 76 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 AKAP14Q86UN6 197 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
NPLOC4-212ENST00000573328 DMBT1Q9UGM3 2413 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 NKX2-5P52952 324 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 MIAQ16674 131 aa6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 RASL11AQ6T310 242 aa6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 Q6ZSA8 131 aa6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 NTM-AS1Q6ZSK4 140 aa6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 LINC00528Q8N1L1 170 aa6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-212ENST00000573328 USP17L23D6RBM5 183 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 M0QY20 66 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 UBE2L6O14933 153 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 NTF3P20783 257 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 CEBPGP53567 150 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 RBX1P62877 108 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 TWIST1Q15672 202 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 ALKAL2Q6UX46 152 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 SCXQ7RTU7 201 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 LINC00269Q8N2A0 174 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 RPP21Q9H633 154 aaKnown RBP6.32□□□□□ -1.4
NPLOC4-212ENST00000573328 DNAH8Q96JB1 4490 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 CTRLP40313 264 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 BLOC1S1P78537 153 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 IQCJQ1A5X6 159 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 SMIM15Q7Z3B0 74 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 TMEM243Q9BU79 118 aa6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 RNASE7Q9H1E1 156 aaKnown RBP6.31□□□□□ -1.4
NPLOC4-212ENST00000573328 IGLV10-54A0A075B6I4 117 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 AMTP48728 403 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 REG3AQ06141 175 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 COTL1Q14019 142 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 LCE2DQ5TA82 110 aaPredicted RBP6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 Q6ZNX1 250 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 C9orf62Q8N4C0 152 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 NIT2Q9NQR4 276 aa6.3□□□□□ -1.4
NPLOC4-212ENST00000573328 MYCBP2O75592 4640 aa6.29□□□□□ -1.4
NPLOC4-212ENST00000573328 K7EN84 100 aa6.29□□□□□ -1.4
NPLOC4-212ENST00000573328 GATCO43716 136 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-212ENST00000573328 OCC1Q8TAD7 63 aa6.29□□□□□ -1.4
NPLOC4-212ENST00000573328 PGLYRP4Q96LB8 373 aa6.29□□□□□ -1.4
NPLOC4-212ENST00000573328 CHAC1Q9BUX1 264 aa6.29□□□□□ -1.4
NPLOC4-212ENST00000573328 PRR34Q9NV39 138 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms