RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 E9PLD3 99 aa11.92□□□□□ -0.5
POLR2A-201ENST00000572844 CCL24O00175 119 aa11.92□□□□□ -0.5
POLR2A-201ENST00000572844 TM2D2Q9BX73 214 aa11.92□□□□□ -0.5
POLR2A-201ENST00000572844 YAE1D1Q9NRH1 226 aa11.92□□□□□ -0.5
POLR2A-201ENST00000572844 OR11H12B2RN74 326 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 I3L3M4 83 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 INSP01308 110 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 UFSP1Q6NVU6 142 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 OR11H2Q8NH07 326 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 TRAV8-6A0A0B4J262 113 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 CD28P10747 220 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 SPXQ9BT56 116 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 CST9LQ9H4G1 147 aa11.91□□□□□ -0.5
POLR2A-201ENST00000572844 TSSC4Q9Y5U2 329 aaPredicted RBP11.91□□□□□ -0.5
POLR2A-201ENST00000572844 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
POLR2A-201ENST00000572844 ZNF469Q96JG9 3925 aaPredicted RBP11.9□□□□□ -0.5
POLR2A-201ENST00000572844 CCDC168Q8NDH2 2452 aa11.9□□□□□ -0.5
POLR2A-201ENST00000572844 NACAE9PAV3 2078 aa11.9□□□□□ -0.5
POLR2A-201ENST00000572844 MYMXA0A1B0GTQ4 84 aa11.9□□□□□ -0.51
POLR2A-201ENST00000572844 RPL39P62891 51 aaKnown RBP11.9□□□□□ -0.51
POLR2A-201ENST00000572844 ODF3L2Q3SX64 289 aa11.9□□□□□ -0.51
POLR2A-201ENST00000572844 AMMECR1LQ6DCA0 310 aa11.9□□□□□ -0.51
POLR2A-201ENST00000572844 MYO9AB2RTY4 2548 aa11.89□□□□□ -0.51
POLR2A-201ENST00000572844 CEND1Q8N111 149 aa11.89□□□□□ -0.51
POLR2A-201ENST00000572844 C20orf203Q8NBC4 194 aa11.89□□□□□ -0.51
POLR2A-201ENST00000572844 C11orf72Q8NBR9 251 aa11.89□□□□□ -0.51
POLR2A-201ENST00000572844 LINC01006Q8NI28 216 aa11.89□□□□□ -0.51
POLR2A-201ENST00000572844 CMC4P56277 68 aaPredicted RBP11.88□□□□□ -0.51
POLR2A-201ENST00000572844 BEAN1Q3B7T3 259 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 OR4C5Q8NGB2 326 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 LINC01587Q99440 93 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 ITPR2Q14571 2701 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 P0DMU3 169 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 FAM231AP0DMU4 169 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 FAM231CP0DMU5 169 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 GCSHP23434 173 aa11.88□□□□□ -0.51
POLR2A-201ENST00000572844 FASNP49327 2511 aaKnown RBP11.87□□□□□ -0.51
POLR2A-201ENST00000572844 C11orf86A6NJI1 115 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 RHODO00212 210 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 SMIM13P0DJ93 91 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 HTN1P15515 57 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 CITED2Q99967 270 aaPredicted RBP11.87□□□□□ -0.51
POLR2A-201ENST00000572844 PRADC1Q9BSG0 188 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 FXYD2P54710 66 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 HERVK_113P61574 105 aa11.87□□□□□ -0.51
POLR2A-201ENST00000572844 TLN2Q9Y4G6 2542 aa11.86□□□□□ -0.51
POLR2A-201ENST00000572844 PDZD2O15018 2839 aa11.86□□□□□ -0.51
POLR2A-201ENST00000572844 A0A1W2PRX2 142 aa11.86□□□□□ -0.51
POLR2A-201ENST00000572844 K7EP13 123 aa11.86□□□□□ -0.51
POLR2A-201ENST00000572844 HIST2H2BDQ6DRA6 164 aa11.86□□□□□ -0.51
POLR2A-201ENST00000572844 FLNAP21333 2647 aaKnown RBP11.86□□□□□ -0.51
POLR2A-201ENST00000572844 CFAP126Q5VTH2 177 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 NFE4Q86UQ8 179 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 UNC79Q9P2D8 2635 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 NDUFA7O95182 113 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 STHQ8IWL8 128 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 C11orf44Q8N8P7 122 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 ZNF418Q8TF45 676 aaPredicted RBP11.85□□□□□ -0.51
POLR2A-201ENST00000572844 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 PYGO1Q9Y3Y4 419 aa11.85□□□□□ -0.51
POLR2A-201ENST00000572844 TRBV7-3A0A075B6L6 115 aa11.84□□□□□ -0.51
POLR2A-201ENST00000572844 RS1O15537 224 aa11.84□□□□□ -0.51
POLR2A-201ENST00000572844 HILS1P60008 231 aa11.84□□□□□ -0.51
POLR2A-201ENST00000572844 TNFRSF18Q9Y5U5 241 aa11.84□□□□□ -0.51
POLR2A-201ENST00000572844 H3BUT2 72 aa11.83□□□□□ -0.51
POLR2A-201ENST00000572844 CRYBA4P53673 196 aa11.83□□□□□ -0.51
POLR2A-201ENST00000572844 GTF2H5Q6ZYL4 71 aa11.83□□□□□ -0.51
POLR2A-201ENST00000572844 FAM110AQ9BQ89 295 aa11.83□□□□□ -0.51
POLR2A-201ENST00000572844 SONP18583 2426 aaKnown RBP11.83□□□□□ -0.52
POLR2A-201ENST00000572844 IGHV3-53P01767 116 aa11.83□□□□□ -0.52
POLR2A-201ENST00000572844 IL17DQ8TAD2 202 aa11.83□□□□□ -0.52
POLR2A-201ENST00000572844 DEFB104AQ8WTQ1 72 aa11.83□□□□□ -0.52
POLR2A-201ENST00000572844 PHLDA1Q8WV24 401 aaPredicted RBP11.83□□□□□ -0.52
POLR2A-201ENST00000572844 HECTD1Q9ULT8 2610 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 PRM2P04554 102 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 IGHV3-73A0A0B4J1V6 119 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 A0A1W2PPM0 123 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 GAGE10A6NGK3 116 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 PROK1P58294 105 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 C1orf158Q8N1D5 194 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 ZNRF2Q8NHG8 242 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 HIST1H4GQ99525 98 aa11.82□□□□□ -0.52
POLR2A-201ENST00000572844 ZNF815PA8K554 130 aa11.81□□□□□ -0.52
POLR2A-201ENST00000572844 K7EP34 96 aa11.81□□□□□ -0.52
POLR2A-201ENST00000572844 RAB37Q96AX2 223 aa11.81□□□□□ -0.52
POLR2A-201ENST00000572844 XCL2Q9UBD3 114 aa11.81□□□□□ -0.52
POLR2A-201ENST00000572844 IGLV4-3A0A075B6K6 122 aa11.8□□□□□ -0.52
POLR2A-201ENST00000572844 AKAP9Q99996 3911 aa11.8□□□□□ -0.52
POLR2A-201ENST00000572844 Q6ZSN1 163 aa11.8□□□□□ -0.52
POLR2A-201ENST00000572844 MRPL16Q9NX20 251 aaKnown RBP11.8□□□□□ -0.52
POLR2A-201ENST00000572844 A0A1B0GWB2 263 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 VCX2Q9H322 139 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 NHP2Q9NX24 153 aaKnown RBP11.79□□□□□ -0.52
POLR2A-201ENST00000572844 IGLV1-51P01701 117 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 EMP1P54849 157 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 SAMD5Q5TGI4 173 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 AMELXQ99217 191 aa11.79□□□□□ -0.52
POLR2A-201ENST00000572844 ADARB2-AS1A8MUL3 147 aa11.78□□□□□ -0.52
POLR2A-201ENST00000572844 FABP2P12104 132 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms